FFCP PHASE1:Hg19::chr11:118213408..118213435,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1673 | |||
|TSSclassifier=strong | |||
|UniProt=P04234,B0YIY4,A8MVP6 | |||
|association_with_transcript=23bp_to_ENST00000300692,NM_000732,NM_001040651,uc001pss.1,uc001pst.1_5end | |||
|description=CAGE_peak_3_at_CD3D_5end | |||
|id=chr11:118213408..118213435,- | |||
|ontology_enrichment_celltype=CL:0000037!6.90e-27!172;CL:0000566!6.90e-27!172;CL:0000738!1.50e-24!140;CL:0000988!8.57e-24!182;CL:0002032!1.98e-23!165;CL:0000837!1.98e-23!165;CL:0002087!2.47e-22!119;CL:0000084!3.01e-21!25;CL:0000827!3.01e-21!25;CL:0000791!1.24e-18!18;CL:0000789!1.24e-18!18;CL:0002420!1.24e-18!18;CL:0002419!1.24e-18!18;CL:0000790!1.24e-18!18;CL:0002031!1.25e-17!124;CL:0000838!3.00e-15!52;CL:0000542!9.61e-15!53;CL:0000051!9.61e-15!53;CL:0000625!1.24e-13!11;CL:0000763!3.98e-10!112;CL:0000049!3.98e-10!112;CL:0000766!2.47e-08!76;CL:0000624!4.01e-08!6;CL:0002057!1.20e-07!42;CL:0002194!3.67e-07!63;CL:0000576!3.67e-07!63;CL:0000040!3.67e-07!63;CL:0000559!3.67e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.80e-38;25!CL:0000791;2.64e-32;18!CL:0000789;2.64e-32;18!CL:0002419;2.64e-32;18!CL:0000625;6.06e-23;11!CL:0000624;3.45e-13;6!CL:0000542;9.27e-13;53!CL:0002087;2.50e-08;104!CL:0000898;1.04e-07;3!CL:0000623;9.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,9.01e-38,25;CL:0000827,9.01e-38,25;CL:0000791,2.65e-32,18;CL:0000789,2.65e-32,18;CL:0002420,2.65e-32,18;CL:0002419,2.65e-32,18;CL:0000790,2.65e-32,18;CL:0000625,6.01e-23,11;CL:0000838,1.13e-22,52;CL:0000738,1.38e-22,136;CL:0000542,4.37e-22,53;CL:0000051,4.37e-22,53;CL:0002087,4.43e-21,115;CL:0000037,1.73e-19,168;CL:0000988,9.20e-18,177;CL:0002032,1.03e-16,161;CL:0000837,1.03e-16,161;CL:0002031,2.75e-16,120;CL:0000624,3.49e-13,6;CL:0000898,1.05e-07,3;CL:0000623,9.12e-07,3;CL:0000825,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.64e-32;18!CL:0000051;9.27e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.71e-13!115;UBERON:0002390!1.72e-11!102;UBERON:0003061!1.72e-11!102;UBERON:0002193!1.30e-10!112;UBERON:0000178!1.14e-09!15;UBERON:0000179!1.14e-09!15;UBERON:0000463!1.14e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.61e-17;15!UBERON:0000179;5.61e-17;15!UBERON:0000463;5.61e-17;15!UBERON:0002390;2.92e-11;32!UBERON:0002193;8.43e-08;42!UBERON:0004177;5.56e-07;5!UBERON:0005057;5.56e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.63e-17,15;UBERON:0000179,5.63e-17,15;UBERON:0000463,5.63e-17,15;UBERON:0002390,5.49e-10,98;UBERON:0003061,5.49e-10,98;UBERON:0002193,5.56e-10,108;UBERON:0004177,1.51e-07,7;UBERON:0005057,1.51e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,11.8009283054671,21.1106168953467,2.16742572642506,0,0,0,0,0,0.293600439334847,6.09394949385065,6.81851121398482,10.199510923645,0.671746422719773,5.18229865630367,1.28787783817093,0.145398238779565,0,0.485168122375632,0,1.6446715520873,0.309706370895104,0,0.512321413058201,0.236482229888585,1.03423704220986,1.29096936716765,0,0.376484679085209,0.818718450173537,0,0,1.92557416245656,1.91801137739712,0.329851300186716,0.797854630486527,0,0.290209238628584,1.13477044938228,0,0.251248665256743,1.0429658368404,0,0,1.84138817993782,1.26584954976354,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,12.3311883855938,0,45.6366666664093,60.1306467006222,56.3348107258655,52.4965595526729,109.183959322253,110.786786541928,114.947769760668,65.1751172778265,84.8465013527531,80.8598715230217,81.7827668570347,58.1534591554565,61.6481307433823,69.7216715519587,75.4435548555366,62.5974665187713,92.9756751026119,97.919943080835,97.2180371386284,47.9298519610705,100.020548830101,100.339214080928,63.5079426968952,99.7109746834423,113.939604424873,125.459669867185,74.5346839434975,85.1110964176882,86.2022013211186,76.2422751581734,96.8931036366835,44.9583037391153,36.906747018124,52.8609074172216,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0.324547393654683,0.696518949197069,0.398873881556595,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,1.18157981336281,366.855835613575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5991526272602,39.2442186244322,23.6151186754737,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8798433959754,22.8657052867734,22.4127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0.470719003883896,0,0,0,0,28.4170661170015,24.468390628556,19.3680043639215,27.6348859531035,32.0862573007231,25.290459136516,31.3218233598107,28.5525063465937,0,0,0,0,0,98.8160204109472,152.889795546941,20.3570958861473,0,0.211673582723883,0,0,0,0,7.51903431270201,0,0,0,0,0.343505344755765,0,0,0,0,0.835218521685727,0,0,19.9843180798692,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0,0,1.31843099381408,0,0.597743964753209,9.66993704359017,0,0,0,0,0,0,0,0.493217028184668,43.1069566224492,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,264.680642326958,0.470940769185074,0.498635045700469,0.225595660617181,1.56850027454192,0.503464760927528,0.37950746544837,0.476809736941136,0,0,0,0,0.995261931078505,1.41532103205343,3.66618086960175,0,0,0,0.067401132980677,1.60515529459758,0,0,0.19566461893209,0,0,4.83962864194656,0,0.31593289814244,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.969890164884194,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.254019996197353,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,1.49502377594773,0.628817220398664,1.65695622138878,21.3351389379139,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0,0,0,0,29.3981471906747,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,1.64477330057155,1.48863353516788,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,3.24131464053368,4.80831033108706,0,0,0,0,0,0,0,3.66537280121429,4.64096793409756,0,0,0,0,0.730336388246517,4.58729283404541,0.143339583151451,0,0,0,9.52248312927721,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0.0918948995348449,0,0.227336094654718,0,0,0.103432995861895,0.639701945702943,7.61806180683969,178.846691335901,115.521043304592,0,0.190941474834495,0.202117188958219,0.435433495793923,0,10.03545589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| |||
|short_description=p3@CD3D | |||
}} |
Revision as of 10:38, 11 January 2014
Short description: | p3@CD3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD3D_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000300692, NM_000732, NM_001040651, uc001pss.1, uc001pst.1_5end |
EntrezGene: | CD3D |
HGNC: | 1673 |
UniProt: | P04234B0YIY4A8MVP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 9.01e-38 | 25 |
pro-T cell | 9.01e-38 | 25 |
mature alpha-beta T cell | 2.65e-32 | 18 |
alpha-beta T cell | 2.65e-32 | 18 |
immature T cell | 2.65e-32 | 18 |
mature T cell | 2.65e-32 | 18 |
immature alpha-beta T cell | 2.65e-32 | 18 |
CD8-positive, alpha-beta T cell | 6.01e-23 | 11 |
lymphoid lineage restricted progenitor cell | 1.13e-22 | 52 |
leukocyte | 1.38e-22 | 136 |
lymphocyte | 4.37e-22 | 53 |
common lymphoid progenitor | 4.37e-22 | 53 |
nongranular leukocyte | 4.43e-21 | 115 |
hematopoietic stem cell | 1.73e-19 | 168 |
hematopoietic cell | 9.20e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.03e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 2.75e-16 | 120 |
CD4-positive, alpha-beta T cell | 3.49e-13 | 6 |
naive T cell | 1.05e-07 | 3 |
natural killer cell | 9.12e-07 | 3 |
pro-NK cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.63e-17 | 15 |
haemolymphatic fluid | 5.63e-17 | 15 |
organism substance | 5.63e-17 | 15 |
hematopoietic system | 5.49e-10 | 98 |
blood island | 5.49e-10 | 98 |
hemolymphoid system | 5.56e-10 | 108 |
hemopoietic organ | 1.51e-07 | 7 |
immune organ | 1.51e-07 | 7 |