FFCP PHASE1:Hg19::chr11:118023653..118023665,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6330 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10592 | |||
|TSSclassifier=strong | |||
|UniProt=E9PPT5,Q8IWT1,B0YJ93 | |||
|association_with_transcript=-23bp_to_NM_001142348,NM_174934,uc001pse.2,uc010rxv.1_5end | |||
|coexpression_cluster_id=C3089 | |||
|description=CAGE_peak_5_at_SCN4B_5end | |||
|id=chr11:118023653..118023665,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.72e-14;3!UBERON:0003057;4.72e-14;3!UBERON:0006222;1.60e-11;1!UBERON:0006601;1.03e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.27e-45!57;UBERON:0005068!1.27e-45!57;UBERON:0006241!1.27e-45!57;UBERON:0007135!1.27e-45!57;UBERON:0007023!1.09e-40!115;UBERON:0002020!4.00e-37!34;UBERON:0003528!4.00e-37!34;UBERON:0001869!2.20e-36!32;UBERON:0002616!8.08e-36!59;UBERON:0001017!5.84e-34!82;UBERON:0001893!6.98e-34!34;UBERON:0005743!9.75e-34!86;UBERON:0000955!5.10e-33!69;UBERON:0006238!5.10e-33!69;UBERON:0002780!2.82e-32!41;UBERON:0001890!2.82e-32!41;UBERON:0006240!2.82e-32!41;UBERON:0002791!7.57e-32!33;UBERON:0003080!2.43e-31!42;UBERON:0003075!2.35e-30!86;UBERON:0007284!2.35e-30!86;UBERON:0002346!3.29e-30!90;UBERON:0000073!1.67e-29!94;UBERON:0001016!1.67e-29!94;UBERON:0000153!4.52e-25!129;UBERON:0007811!4.52e-25!129;UBERON:0003056!6.33e-23!61;UBERON:0000956!8.01e-23!25;UBERON:0000203!8.01e-23!25;UBERON:0000033!1.11e-22!123;UBERON:0000924!4.57e-22!173;UBERON:0006601!4.57e-22!173;UBERON:0004121!8.69e-22!169;UBERON:0002619!1.61e-20!22;UBERON:0001950!4.52e-20!20;UBERON:0002308!1.31e-16!9;UBERON:0000125!1.31e-16!9;UBERON:0003076!3.37e-15!15;UBERON:0003057!3.37e-15!15;UBERON:0000200!6.65e-15!6;UBERON:0009663!3.27e-12!7;UBERON:0000369!2.85e-10!4;UBERON:0002435!2.85e-10!4;UBERON:0000204!2.85e-10!4;UBERON:0010082!2.85e-10!4;UBERON:0004733!1.07e-09!12;UBERON:0002028!1.07e-09!12;UBERON:0007277!1.07e-09!12;UBERON:0002420!2.63e-09!9;UBERON:0007245!2.63e-09!9;UBERON:0010009!2.63e-09!9;UBERON:0010011!2.63e-09!9;UBERON:0000454!2.63e-09!9;UBERON:0000475!2.89e-09!365;UBERON:0000025!3.83e-09!194;UBERON:0004732!7.51e-09!13;UBERON:0004111!8.56e-09!241;UBERON:0000988!1.27e-08!3;UBERON:0000064!1.33e-08!219;UBERON:0002021!1.66e-08!5;UBERON:0000477!2.57e-08!286;UBERON:0002240!3.63e-08!3;UBERON:0005383!4.28e-08!3;UBERON:0005382!4.28e-08!3;UBERON:0002298!5.41e-08!8;UBERON:0000483!5.59e-08!309;UBERON:0002771!7.20e-08!3;UBERON:0000119!8.75e-08!312;UBERON:0002680!5.00e-07!9;UBERON:0001895!5.00e-07!9;UBERON:0010092!5.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.50e-32;32!UBERON:0001893;1.26e-29;34!UBERON:0001950;2.08e-29;20!UBERON:0003528;1.70e-28;34!UBERON:0002020;1.70e-28;34!UBERON:0002791;3.84e-27;32!UBERON:0002619;8.87e-27;22!UBERON:0000200;1.42e-26;6!UBERON:0000956;1.36e-23;25!UBERON:0000203;1.36e-23;25!UBERON:0002780;2.37e-22;41!UBERON:0001890;2.37e-22;41!UBERON:0002702;6.36e-21;2!UBERON:0000073;4.06e-20;53!UBERON:0002616;4.06e-20;53!UBERON:0001872;9.68e-19;5!UBERON:0002021;1.87e-18;5!UBERON:0001017;8.87e-17;75!UBERON:0002298;4.63e-16;6!UBERON:0000988;7.90e-15;3!UBERON:0001870;2.77e-14;3!UBERON:0000955;3.20e-14;68!UBERON:0002240;4.72e-14;3!UBERON:0005174;4.72e-14;3!UBERON:0001137;4.72e-14;3!UBERON:0004733;8.13e-14;12!UBERON:0002028;8.13e-14;12!UBERON:0001016;1.42e-13;83!UBERON:0004732;9.03e-13;13!UBERON:0002581;3.63e-11;1!UBERON:0002902;3.63e-11;1!UBERON:0009899;3.63e-11;1!UBERON:0007190;3.63e-11;1!UBERON:0002680;8.87e-11;9!UBERON:0000125;8.87e-11;9!UBERON:0002308;8.87e-11;9!UBERON:0001895;8.87e-11;9!UBERON:0007023;7.81e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.23e-54,56;UBERON:0005068,4.23e-54,56;UBERON:0006241,4.23e-54,56;UBERON:0007135,4.23e-54,56;UBERON:0000073,5.60e-45,53;UBERON:0002616,5.60e-45,53;UBERON:0001017,2.05e-36,81;UBERON:0003075,2.05e-36,82;UBERON:0007284,2.05e-36,82;UBERON:0001869,7.39e-35,32;UBERON:0002346,1.25e-34,86;UBERON:0000955,3.46e-34,68;UBERON:0006238,3.46e-34,68;UBERON:0003528,5.88e-33,34;UBERON:0002020,5.88e-33,34;UBERON:0001893,8.83e-33,34;UBERON:0001016,1.29e-32,89;UBERON:0002780,2.38e-32,41;UBERON:0001890,2.38e-32,41;UBERON:0003080,2.38e-32,41;UBERON:0006240,2.38e-32,41;UBERON:0010371,1.10e-31,104;UBERON:0001950,1.79e-29,20;UBERON:0002791,8.36e-29,32;UBERON:0002619,7.74e-27,22;UBERON:0000200,1.25e-26,6;UBERON:0010314,1.60e-24,132;UBERON:0003076,1.15e-23,15;UBERON:0003057,1.15e-23,15;UBERON:0000956,1.21e-23,25;UBERON:0000203,1.21e-23,25;UBERON:0003056,2.35e-21,61;UBERON:0002702,9.53e-21,2;UBERON:0007023,3.99e-20,114;UBERON:0001872,7.61e-19,5;UBERON:0002021,1.48e-18,5;UBERON:0004121,4.17e-18,171;UBERON:0000924,4.17e-18,171;UBERON:0006601,4.17e-18,171;UBERON:0002298,5.26e-16,6;UBERON:0000988,8.19e-15,3;UBERON:0000025,3.23e-14,192;UBERON:0001870,3.62e-14,3;UBERON:0002240,4.14e-14,3;UBERON:0005174,4.14e-14,3;UBERON:0001137,4.14e-14,3;UBERON:0004733,9.13e-14,12;UBERON:0002028,9.13e-14,12;UBERON:0007277,9.13e-14,12;UBERON:0004732,1.00e-12,13;UBERON:0011216,1.09e-11,223;UBERON:0002581,2.18e-11,1;UBERON:0007190,3.28e-11,1;UBERON:0002902,4.44e-11,1;UBERON:0009899,4.44e-11,1;UBERON:0004111,7.51e-11,240;UBERON:0002680,9.32e-11,9;UBERON:0001895,9.32e-11,9;UBERON:0010092,9.32e-11,9;UBERON:0000125,9.96e-11,9;UBERON:0002308,9.96e-11,9;UBERON:0000483,2.43e-10,306;UBERON:0000119,3.26e-10,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0.125542639594803,0,0,0,0,0.383829398097213,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,4.42870692906919,0.361789315876224,0,1.54810963903714,0.886642856860642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,2.10838001152805,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,5.42988416718512,0.52893040697076,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,2.65820453990096,0.366078794705889,1.1267183763585,0,0.776503360757966,2.04918129706565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,2.8339315265117,1.91560630868582,0.41023272848151,0,1.45230230174858,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62090203084147,0,3.30698874401895,2.09272173639893,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0,0,4.01021424563307,1.97318320688547,0,0,0,0.471346769748006,0,0.913158720509496,0,0.9555033757741,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,1.57046773691956,0.297046400327086,1.6906229103336,0,0,0,0,0,0,0,0,0.917458566809082,0,0.157771562193185,0.543931921527318,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.426467963801962,0,0.258355639344024,0.248298857183432,0,0,1.81905470062397,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p5@SCN4B | |||
}} |
Revision as of 10:36, 11 January 2014
Short description: | p5@SCN4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCN4B_5end |
Coexpression cluster: | C3089_caudate_pons_diencephalon_locus_parietal_globus_paracentral |
Association with transcript: | -23bp_to_NM_001142348, NM_174934, uc001pse.2, uc010rxv.1_5end |
EntrezGene: | SCN4B |
HGNC: | 10592 |
UniProt: | E9PPT5Q8IWT1B0YJ93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data