FFCP PHASE1:Hg19::chr11:114270843..114270856,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9904 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=91bp_to_ENST00000540163_5end | |||
|description=CAGE_peak_5_at_RBM7_5end | |||
|id=chr11:114270843..114270856,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.52e-13!45;CL:0002057!6.73e-12!42;CL:0000548!4.83e-11!679;CL:0000004!4.83e-11!679;CL:0000255!4.83e-11!679;CL:0000012!1.87e-10!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.16e-13;33!CL:0002057;4.16e-13;33!CL:0002322;4.98e-10;5!CL:0000473;2.50e-08;39!CL:0000234;2.50e-08;39!CL:0000576;3.60e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.32e-13,42;CL:0002057,3.32e-13,42;CL:0000473,8.14e-11,48;CL:0000234,8.14e-11,48;CL:0002322,2.66e-10,5;CL:0002194,2.15e-08,59;CL:0000576,2.15e-08,59;CL:0000040,2.15e-08,59;CL:0000559,2.15e-08,59;CL:0002009,6.09e-08,61;CL:0000839,6.09e-07,66;CL:0000557,9.22e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-10;42 | |||
|ontology_enrichment_disease=DOID:305!3.36e-12!106;DOID:0050687!1.10e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.28e-10,106;DOID:0050687,8.16e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.12e-08!448;UBERON:0004120!1.12e-08!448;UBERON:0006603!1.12e-08!448;UBERON:0000468!2.17e-08!659;UBERON:0000062!3.32e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.35e-08;9!UBERON:0001557;4.35e-08;9!UBERON:0002394;3.29e-07;4!UBERON:0003928;3.29e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.40e-08,9 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.422863212287913,0,1.78784437770915,0,5.06599756336621,0,0.261185628199839,0,0,0,0.263766978228454,0.990130823680373,0.662794751455832,0,0.602694528023977,0,0,0.246242116153576,0.612002073732759,0,0.286235987131057,0.547497700291537,0.502170558379211,0,0,0,0.786728553697808,0.383829398097213,0.928896739896456,0.919421224478927,0.30120591877825,0,0,0,0,1.10799081706375,1.20326668482085,1.08505435357926,0,0,0,0.581592955118259,1.13362783106643,0.485168122375632,0.929716147622738,1.6446715520873,0.309706370895104,2.01384674625505,1.5369642391746,1.18241114944293,1.03423704220986,0.645484683583826,4.06279459783025,1.12945403725563,1.09162460023138,1.12361742222542,1.83650335422542,0,1.27867425159808,0.659702600373432,0.997318288108159,0.852449501065388,1.7412554317715,1.13477044938228,1.24564449799115,1.50749199154046,0,2.17188844705117,3.02699751316684,1.47311054395026,0.949387162322653,0,0.425208599930087,0.419317291016752,0.22465726229299,0.750884464207532,0,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,9.75227465255847,2.68280343881454,0.255725123687061,0,0,0.434539556882471,0,0.486634870302636,0.472674085820339,0.665188192387692,0.87834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0,1.98788780678127,0.12663051166458,1.45650098894541,2.0078563452417,0.354668382198357,0.560677600142307,0,0.24666754841716,1.24484414159907,0.134710672069688,0.163461903113459,0.605429710579726,0.576175924479999,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0.485618833104395,0,0,0.245668634623536,0.413303124703062,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.300476117813194,0.453728732640084,1.61450672119976,0.85422955527427,0.211931901159562,0.300091096084402,0.412210116953756,1.28820270022815,0.37223371266318,0.337552664482532,0.292311015483596,0.252433774244115,1.28869858099219,0.969876340912871,0.355009592516614,0.705264687593482,0.169560592310488,0,0,0.286804595389004,4.87894824518382,4.24095258628753,3.02104251460748,1.86589899027667,2.27088765788066,2.91981887260664,0,0,1.38134921352481,0.928735856063958,0,1.53798840051797,1.01150814046861,0.964044119533928,1.21323370005633,1.52515610864684,1.89816495288877,1.21348177344148,0.784885860501384,1.15424147083917,0,0,0.4115740113314,0,0,0.982827216677626,2.36315962672562,0,0.491953754172454,0.686271241194102,0.329250856225877,1.1240175325762,0,0.0925884451585296,0,0,1.44331342025273,0.463721619900307,1.17408694235822,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,1.16344544182,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0.542621605391443,0,0,1.42156779497018,0.791951872933429,0.301439377059586,0,1.19967589418468,0,0,0,0,1.14861935834114,0,0.434343920002738,0.61642896765115,0,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0.828831026872071,0.613457458595699,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0.521301686808497,0.195801157462741,0,0,0.215714200818617,0.533637789017222,0.909382714338778,0,0.907170879989041,1.48864684691266,0.61384789315225,0.561320188866147,1.28139149255701,0.511707249066704,0.804269605718038,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.116210378459959,0.483437798366489,0.200506470303285,0.0920809889358963,0.229628896329213,0.364182336013434,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0.656029291399411,0,0.412164046590889,0,0,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0.614014698904518,0.137836572484531,0.429680979473094,0.870100163485371,0,0.712256285173899,0.330569830721956,0,0.255225424989168,0.2023155617111,0.929691098594572,1.25924938732256,0,0,0.532306030317022,0,0.18532421910392,0.572499546967965,0,0.949138274156178,0.762520775695299,0,0,0.318203247925937,0,0.719489830333259,0.823611089208164,1.88499843753098,0.404364963146632,1.58510321173008,0,0.48763373908959,0.243713489631284,0,0.818999468447914,1.55545975149084,0,0.551365343546124,0.66343897524122,0,0,0,0.608731130888112,0.30982349809975,0.281695602532241,0.143411352204052,0.785992328104969,0,0,1.89996871767898,0.658589785919804,1.51789269506286,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,1.47024129588619,0,0.432807638929335,0.213425530045242,0,0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| |||
|short_description=p5@RBM7 | |||
}} |
Revision as of 10:25, 11 January 2014
Short description: | p5@RBM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RBM7_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_ENST00000540163_5end |
EntrezGene: | RBM7 |
HGNC: | 9904 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.32e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.32e-13 | 42 |
defensive cell | 8.14e-11 | 48 |
phagocyte | 8.14e-11 | 48 |
embryonic stem cell | 2.66e-10 | 5 |
monopoietic cell | 2.15e-08 | 59 |
monocyte | 2.15e-08 | 59 |
monoblast | 2.15e-08 | 59 |
promonocyte | 2.15e-08 | 59 |
macrophage dendritic cell progenitor | 6.09e-08 | 61 |
myeloid lineage restricted progenitor cell | 6.09e-07 | 66 |
granulocyte monocyte progenitor cell | 9.22e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.40e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.28e-10 | 106 |
cell type cancer | 8.16e-07 | 143 |