FFCP PHASE1:Hg19::chr11:109811699..109811714,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:109811699..109811714,+ | |||
|id=chr11:109811699..109811714,+ | |||
|ontology_enrichment_celltype=CL:0002620!9.51e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.19e-23;1!CL:0000159;1.56e-12;2!CL:0000054;2.74e-12;2!CL:0000137;2.74e-12;2!CL:0000092;2.74e-12;2!CL:0000322;1.26e-08;3!CL:0000306;7.27e-07;4!CL:0002222;7.27e-07;4!CL:0002224;7.27e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.07e-23,1;CL:0000159,1.48e-12,2;CL:0000054,2.90e-12,2;CL:0000137,2.90e-12,2;CL:0000092,2.90e-12,2;CL:0000322,1.21e-08,3;CL:0000306,7.27e-07,4;CL:0002222,7.27e-07,4;CL:0002224,7.27e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.89e-10!235;DOID:14566!1.57e-09!239;DOID:7!1.19e-08!39;DOID:17!1.26e-08!5;DOID:450!1.26e-08!5;DOID:66!1.26e-08!5;DOID:423!1.26e-08!5;DOID:0080000!1.26e-08!5;DOID:11722!1.26e-08!5;DOID:0050687!2.47e-08!143;DOID:201!6.98e-08!6;DOID:0060100!6.98e-08!6;DOID:305!8.28e-08!106;DOID:1749!9.61e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.19e-23;1!DOID:0060085;3.67e-23;1!DOID:3165;3.67e-23;1!DOID:0060121;3.67e-23;1!DOID:2438;3.67e-23;1!DOID:4418;3.67e-23;1!DOID:5662;3.67e-23;1!DOID:200;2.74e-12;2!DOID:4305;2.74e-12;2!DOID:3910;2.74e-12;2!DOID:0060072;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.07e-23,1;DOID:0060085,4.10e-23,1;DOID:3165,4.10e-23,1;DOID:0060121,4.10e-23,1;DOID:2438,4.10e-23,1;DOID:4418,4.10e-23,1;DOID:5662,6.40e-23,1;DOID:3910,2.59e-12,2;DOID:200,2.90e-12,2;DOID:4305,2.90e-12,2;DOID:0060072,9.11e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.74e-12;2!UBERON:0002173;2.74e-12;2!UBERON:0002186;2.74e-12;2!UBERON:0004821;1.26e-08;3!UBERON:0007499;1.26e-08;3!UBERON:0003215;1.26e-08;3!UBERON:0010368;1.26e-08;3!UBERON:0009911;1.26e-08;3!UBERON:0002299;1.26e-08;3!UBERON:0006524;1.26e-08;3!UBERON:0008874;1.26e-08;3!UBERON:0002169;1.26e-08;3!UBERON:0004894;1.26e-08;3!UBERON:0010077;7.27e-07;4!UBERON:0005389;7.27e-07;4!UBERON:0000484;7.27e-07;4!UBERON:0000965;7.27e-07;4!UBERON:0001803;7.27e-07;4!UBERON:0000014;8.85e-07;4!UBERON:0009856;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.59e-12,2;UBERON:0002173,2.59e-12,2;UBERON:0002186,2.59e-12,2;UBERON:0004821,1.21e-08,3;UBERON:0003215,1.21e-08,3;UBERON:0010368,1.21e-08,3;UBERON:0009911,1.21e-08,3;UBERON:0002299,1.21e-08,3;UBERON:0006524,1.21e-08,3;UBERON:0008874,1.21e-08,3;UBERON:0002169,1.21e-08,3;UBERON:0004894,1.21e-08,3;UBERON:0010077,7.27e-07,4;UBERON:0005389,7.27e-07,4;UBERON:0000484,7.27e-07,4;UBERON:0002546,7.27e-07,4;UBERON:0000965,7.27e-07,4;UBERON:0001803,7.27e-07,4;UBERON:0003073,7.27e-07,4;UBERON:0005426,7.27e-07,4;UBERON:0000014,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,1.13477044938228,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.213557388818567,0,0.600182192168805,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,1.42003837006646,0.403008392910561,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,1.84083628503879,0,0,0.449341755736634,0.716084698702437,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0.225595660617181,0,0.167821586975843,0.948768663620925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,1.19228767021794,0,0,0.64127056201227,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,4.35090359971497,0.170388021785422,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.463044948647668,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,4.91545817507439,0,0,0,0,0.567515953566836,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0.690359926060101,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02892805662451,0,0,0,0.333694205676207,0,0.157115589916002,0,0,0,0.9555033757741,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0,0.143444410785353,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr11:109811699..109811714,+ | |||
}} |
Revision as of 10:12, 11 January 2014
Short description: | p@chr11:109811699..109811714, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:109811699..109811714, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.07e-23 | 1 |
seromucus secreting cell | 1.48e-12 | 2 |
bone matrix secreting cell | 2.90e-12 | 2 |
osteocyte | 2.90e-12 | 2 |
osteoclast | 2.90e-12 | 2 |
pneumocyte | 1.21e-08 | 3 |
crystallin accumulating cell | 7.27e-07 | 4 |
vertebrate lens cell | 7.27e-07 | 4 |
lens epithelial cell | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.59e-12 | 2 |
alveolar duct | 2.59e-12 | 2 |
bronchiole | 2.59e-12 | 2 |
pulmonary alveolus epithelium | 1.21e-08 | 3 |
alveolus | 1.21e-08 | 3 |
pulmonary lobule | 1.21e-08 | 3 |
lobule | 1.21e-08 | 3 |
alveolus of lung | 1.21e-08 | 3 |
alveolar system | 1.21e-08 | 3 |
pulmonary acinus | 1.21e-08 | 3 |
alveolar sac | 1.21e-08 | 3 |
alveolar wall | 1.21e-08 | 3 |
cuboidal epithelium | 7.27e-07 | 4 |
transparent eye structure | 7.27e-07 | 4 |
simple cuboidal epithelium | 7.27e-07 | 4 |
cranial placode | 7.27e-07 | 4 |
lens of camera-type eye | 7.27e-07 | 4 |
epithelium of lens | 7.27e-07 | 4 |
lens placode | 7.27e-07 | 4 |
lens vesicle | 7.27e-07 | 4 |
zone of skin | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.07e-23 | 1 |
organ system benign neoplasm | 4.10e-23 | 1 |
skin benign neoplasm | 4.10e-23 | 1 |
integumentary system benign neoplasm | 4.10e-23 | 1 |
dermis tumor | 4.10e-23 | 1 |
cutaneous fibrous histiocytoma | 4.10e-23 | 1 |
pleomorphic carcinoma | 6.40e-23 | 1 |
lung adenocarcinoma | 2.59e-12 | 2 |
giant cell tumor | 2.90e-12 | 2 |
bone giant cell tumor | 2.90e-12 | 2 |
benign neoplasm | 9.11e-07 | 4 |