FFCP PHASE1:Hg19::chr11:70049394..70049445,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8772 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3573 | |||
|TSSclassifier=strong | |||
|UniProt=Q13158 | |||
|association_with_transcript=125bp_to_ENST00000301838,NM_003824,uc001opm.2_5end | |||
|description=CAGE_peak_1_at_FADD_5end | |||
|id=chr11:70049394..70049445,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.36e-26!679;CL:0000004!3.36e-26!679;CL:0000255!3.36e-26!679;CL:0000012!1.43e-25!682;CL:0000003!1.48e-24!722;CL:0000144!3.14e-21!625;CL:0002321!6.54e-20!248;CL:0000220!8.57e-20!246;CL:0002371!1.14e-19!591;CL:0000222!3.15e-17!119;CL:0000066!3.56e-14!254;CL:0000055!4.33e-13!180;CL:0000063!9.09e-11!578;CL:0000213!2.09e-09!57;CL:0000215!2.09e-09!57;CL:0000183!3.95e-09!59;CL:0000076!1.02e-08!62;CL:0000192!1.07e-08!42;CL:0000514!1.07e-08!42;CL:0002078!7.21e-08!44;CL:1000449!8.64e-08!16;CL:0000393!9.83e-08!60;CL:0000211!9.83e-08!60;CL:0000359!1.43e-07!32;CL:0000680!2.79e-07!57;CL:0000056!2.79e-07!57;CL:0000355!2.79e-07!57;CL:0000187!3.45e-07!54;CL:1000497!3.88e-07!18;CL:0002518!3.88e-07!18;CL:0000115!3.94e-07!35;CL:0002681!8.55e-07!13;CL:0002584!8.55e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.77e-08;15!CL:1000497;1.70e-07;17!CL:0002518;1.70e-07;17!CL:0002681;2.34e-07;12!CL:0002584;2.34e-07;12!CL:0000359;4.03e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.79e-20,250;CL:0000222,2.09e-17,121;CL:0000066,2.99e-14,253;CL:0000213,9.69e-10,58;CL:0000215,9.69e-10,58;CL:0000076,1.10e-08,63;CL:0000192,1.81e-08,43;CL:0000514,1.81e-08,43;CL:1000449,2.61e-08,15;CL:0002078,3.34e-08,45;CL:0000393,1.39e-07,61;CL:0000211,1.39e-07,61;CL:0000359,1.43e-07,32;CL:1000497,1.47e-07,17;CL:0002518,1.47e-07,17;CL:0000115,1.80e-07,36;CL:0002681,2.43e-07,12;CL:0002584,2.43e-07,12;CL:0000680,3.92e-07,58;CL:0000056,3.92e-07,58;CL:0000355,3.92e-07,58;CL:0000187,4.90e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.80e-11!118;UBERON:0002049!8.20e-11!79;UBERON:0007798!8.20e-11!79;UBERON:0000490!1.06e-09!138;UBERON:0005256!4.65e-09!143;UBERON:0000055!6.22e-09!69;UBERON:0002100!1.33e-08!216;UBERON:0004535!1.99e-08!110;UBERON:0001981!2.18e-08!60;UBERON:0007500!2.18e-08!60;UBERON:0004537!2.18e-08!60;UBERON:0006965!2.18e-08!60;UBERON:0001637!5.86e-08!42;UBERON:0003509!5.86e-08!42;UBERON:0004572!5.86e-08!42;UBERON:0004872!5.94e-08!84;UBERON:0004211!8.64e-08!16;UBERON:0001285!8.64e-08!16;UBERON:0007684!8.64e-08!16;UBERON:0003220!8.64e-08!16;UBERON:0004208!8.64e-08!16;UBERON:0001009!1.60e-07!113;UBERON:0006555!1.92e-07!17;UBERON:0005103!1.92e-07!17;UBERON:0000083!1.92e-07!17;UBERON:0009201!1.92e-07!17;UBERON:0004819!1.92e-07!17;UBERON:0006553!1.92e-07!17;UBERON:0003074!1.92e-07!17;UBERON:0003060!1.92e-07!17;UBERON:0000486!3.75e-07!82;UBERON:0003104!6.38e-07!238;UBERON:0009142!6.38e-07!238;UBERON:0000080!8.48e-07!18;UBERON:0002120!8.48e-07!18;UBERON:0004875!8.48e-07!18;UBERON:0005721!8.48e-07!18;UBERON:0005754!8.48e-07!18;UBERON:0007297!8.48e-07!18;UBERON:0001225!8.55e-07!13;UBERON:0008987!8.55e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.77e-08;15!UBERON:0004819;2.77e-08;15!UBERON:0001285;2.77e-08;15!UBERON:0007684;2.77e-08;15!UBERON:0003914;1.09e-07;74!UBERON:0001225;2.34e-07;12!UBERON:0008987;2.34e-07;12!UBERON:0000353;2.69e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.87e-11,117;UBERON:0002049,4.68e-11,78;UBERON:0007798,4.68e-11,78;UBERON:0000490,1.07e-10,148;UBERON:0002100,2.91e-09,199;UBERON:0000055,3.66e-09,68;UBERON:0007503,1.14e-08,78;UBERON:0007500,1.25e-08,59;UBERON:0001981,1.25e-08,59;UBERON:0004537,1.25e-08,59;UBERON:0006965,1.25e-08,59;UBERON:0004535,1.39e-08,109;UBERON:0004211,2.61e-08,15;UBERON:0009773,2.61e-08,15;UBERON:0001231,2.61e-08,15;UBERON:0001285,2.61e-08,15;UBERON:0007684,2.61e-08,15;UBERON:0004208,2.61e-08,15;UBERON:0004872,3.92e-08,83;UBERON:0001637,5.86e-08,42;UBERON:0003509,5.86e-08,42;UBERON:0004572,5.86e-08,42;UBERON:0006555,6.55e-08,16;UBERON:0004819,6.55e-08,16;UBERON:0001009,1.16e-07,112;UBERON:0003104,1.52e-07,160;UBERON:0009142,1.52e-07,160;UBERON:0001225,2.43e-07,12;UBERON:0008987,2.43e-07,12;UBERON:0000353,2.97e-07,15;UBERON:0005256,4.57e-07,122;UBERON:0000486,4.80e-07,83 | |||
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| |||
|short_description=p1@FADD | |||
}} |
Revision as of 09:09, 11 January 2014
Short description: | p1@FADD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FADD_5end |
Coexpression cluster: | NA |
Association with transcript: | 125bp_to_ENST00000301838, NM_003824, uc001opm.2_5end |
EntrezGene: | FADD |
HGNC: | 3573 |
UniProt: | Q13158 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.79e-20 | 250 |
mesodermal cell | 2.09e-17 | 121 |
epithelial cell | 2.99e-14 | 253 |
lining cell | 9.69e-10 | 58 |
barrier cell | 9.69e-10 | 58 |
squamous epithelial cell | 1.10e-08 | 63 |
smooth muscle cell | 1.81e-08 | 43 |
smooth muscle myoblast | 1.81e-08 | 43 |
epithelial cell of nephron | 2.61e-08 | 15 |
meso-epithelial cell | 3.34e-08 | 45 |
electrically responsive cell | 1.39e-07 | 61 |
electrically active cell | 1.39e-07 | 61 |
vascular associated smooth muscle cell | 1.43e-07 | 32 |
kidney cell | 1.47e-07 | 17 |
kidney epithelial cell | 1.47e-07 | 17 |
endothelial cell | 1.80e-07 | 36 |
kidney cortical cell | 2.43e-07 | 12 |
renal cortical epithelial cell | 2.43e-07 | 12 |
muscle precursor cell | 3.92e-07 | 58 |
myoblast | 3.92e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.92e-07 | 58 |
muscle cell | 4.90e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.87e-11 | 117 |
vasculature | 4.68e-11 | 78 |
vascular system | 4.68e-11 | 78 |
unilaminar epithelium | 1.07e-10 | 148 |
trunk | 2.91e-09 | 199 |
vessel | 3.66e-09 | 68 |
epithelial vesicle | 1.14e-08 | 78 |
epithelial tube open at both ends | 1.25e-08 | 59 |
blood vessel | 1.25e-08 | 59 |
blood vasculature | 1.25e-08 | 59 |
vascular cord | 1.25e-08 | 59 |
cardiovascular system | 1.39e-08 | 109 |
nephron epithelium | 2.61e-08 | 15 |
renal tubule | 2.61e-08 | 15 |
nephron tubule | 2.61e-08 | 15 |
nephron | 2.61e-08 | 15 |
uriniferous tubule | 2.61e-08 | 15 |
nephrogenic mesenchyme | 2.61e-08 | 15 |
splanchnic layer of lateral plate mesoderm | 3.92e-08 | 83 |
artery | 5.86e-08 | 42 |
arterial blood vessel | 5.86e-08 | 42 |
arterial system | 5.86e-08 | 42 |
excretory tube | 6.55e-08 | 16 |
kidney epithelium | 6.55e-08 | 16 |
circulatory system | 1.16e-07 | 112 |
mesenchyme | 1.52e-07 | 160 |
entire embryonic mesenchyme | 1.52e-07 | 160 |
cortex of kidney | 2.43e-07 | 12 |
renal parenchyma | 2.43e-07 | 12 |
parenchyma | 2.97e-07 | 15 |
trunk mesenchyme | 4.57e-07 | 122 |
multilaminar epithelium | 4.80e-07 | 83 |