FFCP PHASE1:Hg19::chr11:65660338..65660366,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3190 | |||
|description=CAGE_peak_at_chr11:65660338..65660366,- | |||
|id=chr11:65660338..65660366,- | |||
|ontology_enrichment_celltype=CL:0000012!6.56e-36!682;CL:0000548!1.25e-35!679;CL:0000004!1.25e-35!679;CL:0000255!1.25e-35!679;CL:0000144!6.01e-27!625;CL:0002371!2.04e-24!591;CL:0000003!2.89e-23!722;CL:0000220!3.89e-20!246;CL:0002321!8.83e-20!248;CL:0000055!1.83e-19!180;CL:0000063!2.45e-18!578;CL:0000066!1.47e-14!254;CL:0000057!8.25e-13!75;CL:0000222!1.54e-12!119;CL:0000076!3.41e-09!62;CL:0000192!8.74e-07!42;CL:0000514!8.74e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-07;33!CL:0002057;1.10e-07;33!CL:1000497;1.80e-07;17!CL:0002518;1.80e-07;17!CL:0002620;4.76e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.86e-14,250;CL:0000057,9.47e-13,76;CL:0000066,5.11e-10,253;CL:0000222,9.08e-10,121;CL:0000076,8.85e-08,63;CL:1000497,3.45e-07,17;CL:0002518,3.45e-07,17;CL:0002620,9.84e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.45e-11!95;UBERON:0005256!3.60e-10!143;UBERON:0000926!4.32e-10!448;UBERON:0004120!4.32e-10!448;UBERON:0006603!4.32e-10!448;UBERON:0002100!2.21e-09!216;UBERON:0000486!3.91e-09!82;UBERON:0000467!8.40e-09!625;UBERON:0000480!9.83e-09!626;UBERON:0000914!2.06e-08!83;UBERON:0002329!2.06e-08!83;UBERON:0003077!2.06e-08!83;UBERON:0003059!2.06e-08!83;UBERON:0007282!2.06e-08!83;UBERON:0009618!2.06e-08!83;UBERON:0007285!2.06e-08!83;UBERON:0001637!2.70e-08!42;UBERON:0003509!2.70e-08!42;UBERON:0004572!2.70e-08!42;UBERON:0002199!2.88e-08!45;UBERON:0002416!2.88e-08!45;UBERON:0003914!4.41e-08!118;UBERON:0002049!1.32e-07!79;UBERON:0007798!1.32e-07!79;UBERON:0000468!1.47e-07!659;UBERON:0004290!2.21e-07!70;UBERON:0002097!2.34e-07!40;UBERON:0000055!2.72e-07!69;UBERON:0001981!4.05e-07!60;UBERON:0007500!4.05e-07!60;UBERON:0004537!4.05e-07!60;UBERON:0006965!4.05e-07!60;UBERON:0004573!7.88e-07!33;UBERON:0004571!7.88e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.32e-11,99;UBERON:0002100,4.84e-09,199;UBERON:0002199,1.96e-08,46;UBERON:0002416,1.96e-08,46;UBERON:0000486,5.45e-08,83;UBERON:0007503,6.15e-08,78;UBERON:0001637,9.71e-08,42;UBERON:0003509,9.71e-08,42;UBERON:0004572,9.71e-08,42;UBERON:0002097,1.50e-07,41;UBERON:0000926,6.29e-07,315;UBERON:0004120,6.29e-07,315;UBERON:0006603,6.29e-07,315;UBERON:0003914,8.15e-07,117;UBERON:0000490,9.59e-07,148 | |||
|phase1_expression=1.81678379270557,5.1384125733836,1.12763523276777,3.00219895059391,0.446961094427288,0.872338524100369,2.53299878168311,2.52687949370732,0.261185628199839,3.44027511102112,13.2582221914761,0.436882744260345,0,0.37129905888014,0.662794751455832,2.6893005858071,1.80808358407193,1.46062018077475,2.92759679274304,0.984968464614303,5.10001728110633,1.25381888591235,0,2.46373965131192,1.25542639594803,0.534893840235659,0.410502947249729,0.314843125254717,0,0,0.309632246632152,0.919421224478927,3.91567694411725,3.32778609150109,0,0,0,0.553995408531877,2.80762226458198,1.08505435357926,0,0,0,1.01778767145695,2.26725566213286,0.242584061187816,3.25400651667958,4.52284676824008,4.33588919253145,10.3569261235974,2.56160706529101,3.07426898855161,3.7922024881028,1.29096936716765,4.06279459783025,2.44715041405386,4.36649840092553,1.57306439111559,8.87643287875617,5.1348644332175,1.91801137739712,1.9791078011203,2.79249120670285,0.426224750532694,11.6083695451434,2.8369261234557,5.60540024096017,11.5574386018102,5.21482918420201,6.08128765174327,6.65939452896706,5.52416453981347,3.79754864929061,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,3.61439152384566,2.00535164254356,4.34539556882471,0.795285947051099,0,1.32348744029695,1.77383517970051,1.05401742831751,0,2.91436230634034,3.70784442784429,0,0,0,0,0,0,0.993812036833525,2.58070378531837,1.38856200643038,2.82653970962005,4.61449379830897,4.95212475492121,1.67195973229448,0.775250277507987,0.71153252537342,0.33472061276467,1.61131726843659,3.80136052859256,0.732186172644509,2.57364156242108,3.24056779152704,1.07159673940896,0.673588117878509,0.900891843866578,0,0.949265659568129,1.64881569537367,0,0,1.74437620857014,0.496971951695318,3.16576279161449,1.19168262731897,0.573673241497627,6.73869926176878,1.12135520028461,1.06748995729705,2.96001058100592,0.311211035399766,0.67355336034844,1.79808093424805,0.151357427644931,0.576175924479999,2.34321431833797,7.17968176709737,1.71141546463335,8.66802347200446,8.57271840099484,6.31304483035713,5.47758146138769,2.44985005505872,12.7747690004239,1.44656093646072,1.18800285728205,2.71993622206413,4.55080680969013,5.74894513452991,3.53505839303539,6.13080747372624,1.93944880838928,2.63386572528503,2.75839016219118,2.85452311922534,1.47461838108027,5.56107870635472,1.06778694409284,2.11931901159562,3.00091096084402,2.06105058476878,1.03056216018252,1.8611685633159,2.36286865137773,2.92311015483596,3.02920529092937,0.644349290496095,0.80823028409406,3.19508633264953,4.33234022378853,3.39121184620975,1.54608682530637,1.90922284413584,1.72082757233402,0.243947412259191,0.132529768321485,0.116193942869518,0.414644220061482,0,0,1.56449532329816,1.92972281457866,4.14404764057442,3.25057549622385,0,0.236613600079688,0.337169380156203,0,0.661763836394364,1.52515610864684,0,0.404493924480493,1.17732879075208,0.769494313892781,2.21446636387394,7.01208869017229,0,1.47008711385542,0,0,0,0,0.122988438543114,0.686271241194102,4.7192622725709,1.1240175325762,11.2592449101027,2.96283024507295,5.2129328849652,7.27954349695705,0,0.927443239800615,0.469634776943287,1.58803092537181,1.38895653772983,0.380508304469197,0,0,0,0.234004265139238,0.297262324577456,0.93733833986777,0.839910640994298,1.84307626415102,5.28395283946805,13.3691611716422,2.68367875415648,0.985326475791887,0,0.207328115540772,0.288239906833923,0.50496973370552,0.317489471460845,1.90994212779139,0,5.13217338068116,5.86116708408944,2.70308752059526,1.42913216315289,1.56983518083505,0,4.8403268641827,1.29271715757778,0,6.762422020448,0.797814349754612,4.16029747645464,3.08648849114571,1.41849132023278,4.26275486425759,0.428933980974443,0.542621605391443,0.823240336780769,1.62868092146868,0.355391948742546,0.791951872933429,0.602878754119172,0,2.7992437530976,0,0,0,3.11512312139057,0,0,3.61953266668948,8.01357657946495,0.895304816199478,0,0,0,0.128343036279748,1.01637849688985,1.30139853857622,1.54657762555539,0.502548796003046,5.74144876487847,1.49801404789436,0,0.414415513436035,0.49076596687656,0.500170521059677,1.62759014219841,2.07970861530807,7.67244651827796,0.946214490203608,1.87426263988341,0.300946099727719,0,4.1389228517002,5.31380478828349,0.921845842708516,4.86548241021264,0.979005787313703,0.343143423810856,0,0.862856803274467,0.213455115606889,2.12189300012382,0,1.5119514666484,1.24053903909388,0.61384789315225,1.68396056659844,1.28139149255701,2.04682899626681,1.28683136914886,0,7.86469438393543,4.08391968220192,3.36721339656617,14.5391240171414,5.11325665223821,0.966875596732978,6.01519410909855,4.05156351317944,2.06666006696292,12.5642905924635,2.36023946926963,3.60959690325929,2.31046011313244,5.49044838423799,4.38417673959782,2.53323909342902,1.13733384070897,3.06168669497728,3.02282282542995,4.62681758070868,1.35473218771926,2.00675909541941,4.3328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| |||
|short_description=p@chr11:65660338..65660366,- | |||
}} |
Revision as of 08:44, 11 January 2014
Short description: | p@chr11:65660338..65660366, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65660338..65660366, - |
Coexpression cluster: | C3190_papillary_leiomyoma_mesothelioma_meningioma_myxofibrosarcoma_squamous_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.86e-14 | 250 |
fibroblast | 9.47e-13 | 76 |
epithelial cell | 5.11e-10 | 253 |
mesodermal cell | 9.08e-10 | 121 |
squamous epithelial cell | 8.85e-08 | 63 |
kidney cell | 3.45e-07 | 17 |
kidney epithelial cell | 3.45e-07 | 17 |
skin fibroblast | 9.84e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.32e-11 | 99 |
trunk | 4.84e-09 | 199 |
integument | 1.96e-08 | 46 |
integumental system | 1.96e-08 | 46 |
multilaminar epithelium | 5.45e-08 | 83 |
epithelial vesicle | 6.15e-08 | 78 |
artery | 9.71e-08 | 42 |
arterial blood vessel | 9.71e-08 | 42 |
arterial system | 9.71e-08 | 42 |
skin of body | 1.50e-07 | 41 |
mesoderm | 6.29e-07 | 315 |
mesoderm-derived structure | 6.29e-07 | 315 |
presumptive mesoderm | 6.29e-07 | 315 |
epithelial tube | 8.15e-07 | 117 |
unilaminar epithelium | 9.59e-07 | 148 |