FFCP PHASE1:Hg19::chr11:65629516..65629528,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1072 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1874 | |||
|TSSclassifier=strong | |||
|UniProt=E9PP50 | |||
|association_with_transcript=-19bp_to_ENST00000532134_5end | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_29_at_CFL1_5end | |||
|id=chr11:65629516..65629528,- | |||
|ontology_enrichment_celltype=CL:0000066!7.21e-13!254 | |||
|ontology_enrichment_celltype_v019=CL:0002097;3.61e-34;2!CL:0000174;2.62e-23;3!CL:0000312;1.71e-14;5!CL:0000240;2.59e-12;6!CL:0000311;2.59e-12;6!CL:0000079;2.59e-12;6!CL:0000237;2.59e-12;6!CL:0000138;2.59e-12;6!CL:0000150;1.04e-08;9!CL:0000163;1.04e-08;9!CL:0000153;1.16e-08;9!CL:0000447;1.16e-08;9!CL:0000362;1.16e-08;9!CL:0000151;5.50e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,3.61e-34,2;CL:0000174,2.62e-23,3;CL:0000312,1.60e-14,5;CL:0000240,2.45e-12,6;CL:0000311,2.45e-12,6;CL:0000079,2.45e-12,6;CL:0000237,2.45e-12,6;CL:0000036,2.45e-12,6;CL:0000357,2.45e-12,6;CL:0000114,2.45e-12,6;CL:0000058,2.74e-12,6;CL:0000138,2.74e-12,6;CL:0000150,1.04e-08,9;CL:0000163,1.04e-08,9;CL:0000362,1.12e-08,9;CL:0000153,1.21e-08,9;CL:0000447,1.21e-08,9;CL:0000151,1.85e-08,36 | |||
|ontology_enrichment_development_v019=CL:0000357;2.59e-12;6!CL:0000114;2.59e-12;6 | |||
|ontology_enrichment_disease=DOID:162!3.33e-08!235;DOID:14566!8.36e-08!239;DOID:0050687!2.20e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3371;3.34e-66;1!DOID:4549;3.34e-66;1!DOID:5861;3.34e-66;1!DOID:6496;3.34e-66;1!DOID:170;2.19e-12;6!DOID:201;2.59e-12;6!DOID:0060100;2.59e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.66e-66,1;DOID:4549,4.66e-66,1;DOID:5861,4.66e-66,1;DOID:6496,4.66e-66,1;DOID:170,2.19e-12,6;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;2.62e-23;3!UBERON:0001235;2.62e-23;3!UBERON:0006858;2.62e-23;3!UBERON:0002418;3.66e-23;3!UBERON:0004755;3.66e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.62e-23,3;UBERON:0001235,2.62e-23,3;UBERON:0006858,2.62e-23,3;UBERON:0002418,4.09e-23,3;UBERON:0004755,4.09e-23,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0.301586917234893,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.985143749731331,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0.229628896329213,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0.195984794828755,0,0.17472666824203,0.343972064943233,0,0,0,0,1.059073520298,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0.248505071130865,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0.76280561296425,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86213092399762,0.260994291965212,0,0,0,0.179088841081487,0,0.877136198314828,0,0.38582807654183,0.337884881306145,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0.428859265059938,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.392600934460972,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p29@CFL1 | |||
}} |
Revision as of 08:44, 11 January 2014
Short description: | p29@CFL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_CFL1_5end |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | -19bp_to_ENST00000532134_5end |
EntrezGene: | CFL1 |
HGNC: | 1874 |
UniProt: | E9PP50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 3.61e-34 | 2 |
steroid hormone secreting cell | 2.62e-23 | 3 |
keratinocyte | 1.60e-14 | 5 |
stratified squamous epithelial cell | 2.45e-12 | 6 |
keratin accumulating cell | 2.45e-12 | 6 |
stratified epithelial cell | 2.45e-12 | 6 |
keratinizing barrier epithelial cell | 2.45e-12 | 6 |
epithelial fate stem cell | 2.45e-12 | 6 |
stratified epithelial stem cell | 2.45e-12 | 6 |
surface ectodermal cell | 2.45e-12 | 6 |
chondroblast | 2.74e-12 | 6 |
chondrocyte | 2.74e-12 | 6 |
glandular epithelial cell | 1.04e-08 | 9 |
endocrine cell | 1.04e-08 | 9 |
epidermal cell | 1.12e-08 | 9 |
GAG secreting cell | 1.21e-08 | 9 |
carbohydrate secreting cell | 1.21e-08 | 9 |
secretory cell | 1.85e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.62e-23 | 3 |
adrenal cortex | 2.62e-23 | 3 |
adrenal/interrenal gland | 2.62e-23 | 3 |
cartilage tissue | 4.09e-23 | 3 |
skeletal tissue | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.66e-66 | 1 |
extraosseous chondrosarcoma | 4.66e-66 | 1 |
myxoid chondrosarcoma | 4.66e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 4.66e-66 | 1 |
endocrine gland cancer | 2.19e-12 | 6 |
connective tissue cancer | 2.74e-12 | 6 |
musculoskeletal system cancer | 2.74e-12 | 6 |