FFCP PHASE1:Hg19::chr11:62341629..62341688,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK125351_5end | |||
|description=CAGE_peak_1_at_AK125351_5end | |||
|id=chr11:62341629..62341688,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.62e-20!180;CL:0000057!4.24e-12!75;CL:0000222!4.65e-10!119;CL:0000183!1.66e-09!59;CL:0000192!1.29e-08!42;CL:0000514!1.29e-08!42;CL:0000187!1.31e-07!54;CL:0000680!2.39e-07!57;CL:0000056!2.39e-07!57;CL:0000355!2.39e-07!57;CL:0000359!4.04e-07!32;CL:0000115!5.53e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.16e-07;19!CL:0000134;3.43e-07;55!CL:0000359;4.56e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.60e-12,76;CL:0000222,2.22e-10,121;CL:0000192,1.40e-08,43;CL:0000514,1.40e-08,43;CL:0000187,9.44e-08,55;CL:0000349,1.54e-07,19;CL:0000680,1.73e-07,58;CL:0000056,1.73e-07,58;CL:0000355,1.73e-07,58;CL:0000115,2.27e-07,36;CL:0000359,3.82e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.07e-13!79;UBERON:0007798!1.07e-13!79;UBERON:0000477!6.24e-12!286;UBERON:0000055!3.89e-11!69;UBERON:0003914!6.01e-11!118;UBERON:0001981!1.62e-09!60;UBERON:0007500!1.62e-09!60;UBERON:0004537!1.62e-09!60;UBERON:0006965!1.62e-09!60;UBERON:0004872!1.62e-09!84;UBERON:0005256!1.60e-08!143;UBERON:0000490!2.21e-08!138;UBERON:0001637!2.64e-08!42;UBERON:0003509!2.64e-08!42;UBERON:0004572!2.64e-08!42;UBERON:0004535!1.24e-07!110;UBERON:0001009!2.49e-07!113;UBERON:0000914!3.69e-07!83;UBERON:0002329!3.69e-07!83;UBERON:0003077!3.69e-07!83;UBERON:0003059!3.69e-07!83;UBERON:0007282!3.69e-07!83;UBERON:0009618!3.69e-07!83;UBERON:0007285!3.69e-07!83;UBERON:0002100!4.59e-07!216;UBERON:0000478!5.47e-07!24;UBERON:0000481!6.91e-07!347;UBERON:0004111!7.01e-07!241;UBERON:0004290!9.17e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.13e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,4.34e-14,78;UBERON:0007798,4.34e-14,78;UBERON:0000055,1.70e-11,68;UBERON:0003914,5.54e-11,117;UBERON:0004872,6.87e-10,83;UBERON:0007500,7.32e-10,59;UBERON:0001981,7.32e-10,59;UBERON:0004537,7.32e-10,59;UBERON:0006965,7.32e-10,59;UBERON:0000490,1.05e-09,148;UBERON:0003104,4.40e-09,160;UBERON:0009142,4.40e-09,160;UBERON:0005256,5.16e-09,122;UBERON:0007503,6.49e-09,78;UBERON:0001637,2.46e-08,42;UBERON:0003509,2.46e-08,42;UBERON:0004572,2.46e-08,42;UBERON:0004535,5.24e-08,109;UBERON:0001009,1.22e-07,112;UBERON:0000478,5.17e-07,24;UBERON:0002329,5.35e-07,71;UBERON:0003059,5.35e-07,71;UBERON:0007282,5.35e-07,71;UBERON:0004290,5.35e-07,71;UBERON:0009618,5.35e-07,71;UBERON:0003077,8.00e-07,72;UBERON:0007285,8.00e-07,72;UBERON:0007524,9.86e-07,73 | |||
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| |||
|short_description=p1@AK125351 | |||
}} |
Revision as of 08:08, 11 January 2014
Short description: | p1@AK125351 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK125351_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK125351_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.60e-12 | 76 |
mesodermal cell | 2.22e-10 | 121 |
smooth muscle cell | 1.40e-08 | 43 |
smooth muscle myoblast | 1.40e-08 | 43 |
muscle cell | 9.44e-08 | 55 |
extraembryonic cell | 1.54e-07 | 19 |
muscle precursor cell | 1.73e-07 | 58 |
myoblast | 1.73e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.73e-07 | 58 |
endothelial cell | 2.27e-07 | 36 |
vascular associated smooth muscle cell | 3.82e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vasculature | 4.34e-14 | 78 |
vascular system | 4.34e-14 | 78 |
vessel | 1.70e-11 | 68 |
epithelial tube | 5.54e-11 | 117 |
splanchnic layer of lateral plate mesoderm | 6.87e-10 | 83 |
epithelial tube open at both ends | 7.32e-10 | 59 |
blood vessel | 7.32e-10 | 59 |
blood vasculature | 7.32e-10 | 59 |
vascular cord | 7.32e-10 | 59 |
unilaminar epithelium | 1.05e-09 | 148 |
mesenchyme | 4.40e-09 | 160 |
entire embryonic mesenchyme | 4.40e-09 | 160 |
trunk mesenchyme | 5.16e-09 | 122 |
epithelial vesicle | 6.49e-09 | 78 |
artery | 2.46e-08 | 42 |
arterial blood vessel | 2.46e-08 | 42 |
arterial system | 2.46e-08 | 42 |
cardiovascular system | 5.24e-08 | 109 |
circulatory system | 1.22e-07 | 112 |
extraembryonic structure | 5.17e-07 | 24 |
somite | 5.35e-07 | 71 |
presomitic mesoderm | 5.35e-07 | 71 |
presumptive segmental plate | 5.35e-07 | 71 |
dermomyotome | 5.35e-07 | 71 |
trunk paraxial mesoderm | 5.35e-07 | 71 |
paraxial mesoderm | 8.00e-07 | 72 |
presumptive paraxial mesoderm | 8.00e-07 | 72 |
dense mesenchyme tissue | 9.86e-07 | 73 |