FFCP PHASE1:Hg19::chr11:2154122..2154138,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-79bp_to_CU674261_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_4_at_CU674261_5end | |||
|id=chr11:2154122..2154138,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.39e-28;19!CL:0002577;1.89e-12;3!CL:0000669;6.96e-10;4!CL:0002575;1.14e-09;2!CL:0002536;2.55e-09;2!CL:0002537;6.91e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.57e-28,19;CL:0002577,9.53e-13,3;CL:0000669,1.01e-09,4;CL:0002575,1.15e-09,2;CL:0002536,2.84e-09,2;CL:0002537,7.26e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.67e-09;11!UBERON:0009497;1.76e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.01e-18!14;UBERON:0000158!3.01e-18!14;UBERON:0000478!1.55e-12!24;UBERON:0003124!1.52e-11!7;UBERON:0002107!1.72e-09!19;UBERON:0006925!1.72e-09!19;UBERON:0008836!1.72e-09!19;UBERON:0008835!4.99e-09!22;UBERON:0003894!4.99e-09!22;UBERON:0009854!1.74e-08!23;UBERON:0000305!1.76e-08!7;UBERON:0005256!1.02e-07!143;UBERON:0003929!1.46e-07!54;UBERON:0007499!1.54e-07!25;UBERON:0009497!1.54e-07!25;UBERON:0000015!1.54e-07!25;UBERON:0002423!1.54e-07!25;UBERON:0006235!1.54e-07!25;UBERON:0004161!1.54e-07!25;UBERON:0001987!2.36e-07!4;UBERON:0004340!2.36e-07!4;UBERON:0004871!2.80e-07!8;UBERON:0005057!3.69e-07!26;UBERON:0009856!4.02e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.15e-22;24!UBERON:0005631;1.54e-19;10!UBERON:0000158;1.54e-19;10!UBERON:0000305;1.59e-14;7!UBERON:0001987;1.89e-09;4!UBERON:0002107;3.28e-09;19!UBERON:0006925;3.28e-09;19!UBERON:0002423;9.10e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.74e-27,14;UBERON:0000158,1.74e-27,14;UBERON:0000478,5.16e-22,24;UBERON:0003124,1.12e-14,7;UBERON:0000305,1.81e-14,7;UBERON:0004871,1.28e-12,8;UBERON:0001987,1.14e-09,4;UBERON:0004340,1.14e-09,4;UBERON:0002107,3.47e-09,19;UBERON:0006925,3.47e-09,19;UBERON:0008836,3.47e-09,19;UBERON:0008835,8.42e-08,22;UBERON:0003894,8.42e-08,22;UBERON:0009854,2.03e-07,23;UBERON:0007499,9.48e-07,25;UBERON:0009497,9.48e-07,25;UBERON:0000015,9.48e-07,25;UBERON:0002423,9.48e-07,25;UBERON:0006235,9.48e-07,25;UBERON:0004161,9.48e-07,25 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,0,1.39560233594486,5.24259293112413,3.4289707169699,0.123766352960047,0.994192127183747,0,0,0,0,0.123121058076788,1.42800483870977,1.25381888591235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.464775771478074,0.10366105501537,0.252320850875628,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0.982827216677626,0.590789906681404,0,4.18160691046586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,12.4802969240032,0,0,1.06617584622764,1.58390374586686,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,1.00034104211935,0.813795071099207,1.03985430765404,0.713715955188647,0.946214490203608,1.7571212248907,0,0,1.03473071292505,0,0.184369168541703,0,7.04884166865866,16.1277409191102,0,0,0,1.81876542867756,1.66435439510497,9.07170879989041,0,0,0,0,0,0,0,0,0,0,0,0,3.98836183652353,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0.721287081534056,0,0,0,0,0,0.290012154876366,0,0,0,0,0.145016693914229,0.0852266274161009,4.98579399621729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.491245205065606,0,0,0,0,0,0,0,0,0,0.659006605437454,0.43050537267123,0,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58116727106535,2.37571744666111,3.68592842519078,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.46112780877612,0,0,8.61303131276183,0.366390373607449,9.59462596833542,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0.067401132980677,4.01288823649394,0,0,0,0,0,3.62972148145992,0,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0,0.0882561266915003,2.48578814858586,0,0,0.0633107959558787,0,0,0,1.59847687665704,0,0,5.3194449337209,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.599037001496973,0.429226048136571,0,0.940568614814168,0,0,2.75741138075283,2.47247575143499,2.42652757875066,1.57483970423598,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,6.62534444561107,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,0,0,0.0679697329768317,0.0657727735628491,0,0,0.39246546425257,0,1.40136081656895,0,0,0,0.571812353413251,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0.647428837187895,0,8.11870101936739,0.971421986118279,0,0.994753875806841,0,0,0,0,0,0.655678681511872,0,0,0,1.37415926980462,0,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90451545170992,0,0,0,0,1.21270313374932,0.217716747896961,6.84466602170562,0.0673520530145875,0,1.66330178273007,0.325613074443898,0,0,1.25755282949222,0,0,1.62758471326295,0,0,0 | |||
|short_description=p4@CU674261 | |||
}} |
Revision as of 06:09, 11 January 2014
Short description: | p4@CU674261 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU674261_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -79bp_to_CU674261_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.57e-28 | 19 |
placental epithelial cell | 9.53e-13 | 3 |
pericyte cell | 1.01e-09 | 4 |
central nervous system pericyte | 1.15e-09 | 2 |
amniotic epithelial cell | 2.84e-09 | 2 |
amnion mesenchymal stem cell | 7.26e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.74e-27 | 14 |
membranous layer | 1.74e-27 | 14 |
extraembryonic structure | 5.16e-22 | 24 |
chorion | 1.12e-14 | 7 |
amnion | 1.81e-14 | 7 |
somatic layer of lateral plate mesoderm | 1.28e-12 | 8 |
placenta | 1.14e-09 | 4 |
allantois | 1.14e-09 | 4 |
liver | 3.47e-09 | 19 |
digestive gland | 3.47e-09 | 19 |
liver bud | 3.47e-09 | 19 |
hepatic diverticulum | 8.42e-08 | 22 |
liver primordium | 8.42e-08 | 22 |
digestive tract diverticulum | 2.03e-07 | 23 |
epithelial sac | 9.48e-07 | 25 |
epithelium of foregut-midgut junction | 9.48e-07 | 25 |
anatomical boundary | 9.48e-07 | 25 |
hepatobiliary system | 9.48e-07 | 25 |
foregut-midgut junction | 9.48e-07 | 25 |
septum transversum | 9.48e-07 | 25 |