FFCP PHASE1:Hg19::chr10:123845220..123845230,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2041 | |||
|description=CAGE_peak_at_chr10:123845220..123845230,+ | |||
|id=chr10:123845220..123845230,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.17e-31!43;CL:0002251!1.72e-29!21;CL:0000223!1.02e-21!59;CL:0000066!8.35e-15!254;CL:0002623!3.79e-13!3;CL:0002621!8.46e-13!3;CL:0000076!5.46e-11!62;CL:0000240!5.72e-11!6;CL:0000311!5.72e-11!6;CL:0000079!5.72e-11!6;CL:0000237!5.72e-11!6;CL:0000036!5.72e-11!6;CL:0000357!5.72e-11!6;CL:0000114!5.72e-11!6;CL:0002159!1.60e-10!13;CL:0002368!4.53e-10!13;CL:0000575!5.62e-09!2;CL:0000622!4.76e-08!5;CL:0000312!7.79e-08!5;CL:0000154!9.14e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.07e-13;2!CL:0001016;1.07e-13;2!CL:0002567;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.07e-13,2;CL:0001016,1.07e-13,2;CL:0002567,1.19e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.39e-21!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;5.92e-26;1!DOID:3149;5.92e-26;1!DOID:1749;1.41e-16;14!DOID:3451;1.07e-13;2!DOID:4159;1.07e-13;2!DOID:0060122;1.07e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.61e-26,1;DOID:3149,4.61e-26,1;DOID:1749,1.41e-16,14;DOID:3451,9.40e-14,2;DOID:4159,9.40e-14,2;DOID:0060122,9.40e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!4.93e-25!21;UBERON:0000165!2.31e-21!28;UBERON:0000930!2.31e-21!28;UBERON:0003729!6.33e-20!5;UBERON:0000161!6.30e-19!35;UBERON:0003343!2.70e-16!4;UBERON:0004785!2.70e-16!4;UBERON:0001444!2.85e-15!48;UBERON:0001004!4.91e-15!72;UBERON:0003102!7.54e-15!95;UBERON:0001949!8.46e-13!3;UBERON:0000344!2.62e-11!12;UBERON:0000974!1.04e-09!10;UBERON:0004119!3.57e-09!169;UBERON:0000925!3.57e-09!169;UBERON:0006595!3.57e-09!169;UBERON:0000078!2.22e-07!18;UBERON:0001044!9.14e-07!6;UBERON:0003293!9.14e-07!6;UBERON:0003294!9.14e-07!6;UBERON:0010047!9.14e-07!6;UBERON:0000167!9.14e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.26e-25;4!UBERON:0004785;1.26e-25;4!UBERON:0000974;1.85e-17;6!UBERON:0003729;1.36e-08;13!UBERON:0000014;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.84e-25,4;UBERON:0004785,1.84e-25,4;UBERON:0000974,8.06e-11,10;UBERON:0003729,1.53e-08,13;UBERON:0000014,1.59e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.201057944823262,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,4.46155981691531,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,1.67717343799633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0.235939446695481,1.46742878817343,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.51215543128185,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:123845220..123845230,+ | |||
}} |
Revision as of 05:21, 11 January 2014
Short description: | p@chr10:123845220..123845230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123845220..123845230, + |
Coexpression cluster: | C2041_cervical_immature_malignant_keratoacanthoma_salivary_nasal_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.07e-13 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-13 | 2 |
light melanocyte | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.84e-25 | 4 |
respiratory system mucosa | 1.84e-25 | 4 |
neck | 8.06e-11 | 10 |
mouth mucosa | 1.53e-08 | 13 |
zone of skin | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.61e-26 | 1 |
keratoacanthoma | 4.61e-26 | 1 |
squamous cell carcinoma | 1.41e-16 | 14 |
skin carcinoma | 9.40e-14 | 2 |
skin cancer | 9.40e-14 | 2 |
integumentary system cancer | 9.40e-14 | 2 |