FFCP PHASE1:Hg19::chr10:109196502..109196516,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr10:109196502..109196516,- | |||
|id=chr10:109196502..109196516,- | |||
|ontology_enrichment_celltype=CL:0000080!1.23e-10!6;CL:0002566!2.17e-07!1;CL:0002574!2.63e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.58e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.58e-07,25;CL:0000827,2.58e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!5.22e-08!1;DOID:0060061!5.22e-08!1;DOID:8691!5.22e-08!1;DOID:630!1.01e-07!1;DOID:0050177!1.01e-07!1;DOID:0050427!1.01e-07!1;DOID:6193!1.69e-07!1;DOID:0050619!1.80e-07!1;DOID:1357!1.80e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.21e-40;1!DOID:0060061;2.21e-40;1!DOID:8691;2.21e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.21e-40,1;DOID:0060061,2.21e-40,1;DOID:8691,2.21e-40,1 | |||
|ontology_enrichment_uberon=UBERON:0001875!1.27e-13!2;UBERON:0006514!1.27e-13!2;UBERON:0001301!6.37e-08!1;UBERON:0000989!7.76e-08!1;UBERON:0008811!7.76e-08!1;UBERON:0006258!7.76e-08!1;UBERON:0005876!7.76e-08!1;UBERON:0004874!7.76e-08!1;UBERON:0001764!1.80e-07!1;UBERON:0001825!1.80e-07!1;UBERON:0003101!5.01e-07!22;UBERON:0000079!5.01e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.40e-36;10!UBERON:0000178;1.40e-24;15!UBERON:0000179;1.40e-24;15!UBERON:0000463;1.40e-24;15!UBERON:0000478;1.02e-15;24!UBERON:0002390;4.20e-12;32!UBERON:0000922;5.87e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.40e-36,10;UBERON:0000358,2.40e-36,10;UBERON:0000307,2.40e-36,10;UBERON:0000091,2.40e-36,10;UBERON:0000087,2.40e-36,10;UBERON:0007010,2.40e-36,10;UBERON:0007806,2.40e-36,10;UBERON:0008780,2.40e-36,10;UBERON:0005728,2.40e-36,10;UBERON:0000178,1.40e-24,15;UBERON:0000179,1.40e-24,15;UBERON:0000463,1.40e-24,15;UBERON:0000478,1.02e-15,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.8199859596543,6.91958058100416,7.20511451587642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0.600420288709789,0.136905378891993,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.209818352539992,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.982829546539238,0,0,2.39984875025916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.222462803784138,0,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr10:109196502..109196516,- | |||
}} |
Revision as of 04:54, 11 January 2014
Short description: | p@chr10:109196502..109196516, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr10:109196502..109196516, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.58e-07 | 25 |
pro-T cell | 2.58e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.40e-36 | 10 |
blastocyst | 2.40e-36 | 10 |
blastula | 2.40e-36 | 10 |
bilaminar disc | 2.40e-36 | 10 |
inner cell mass | 2.40e-36 | 10 |
cleaving embryo | 2.40e-36 | 10 |
connecting stalk | 2.40e-36 | 10 |
inner cell mass derived epiblast | 2.40e-36 | 10 |
extraembryonic mesoderm | 2.40e-36 | 10 |
blood | 1.40e-24 | 15 |
haemolymphatic fluid | 1.40e-24 | 15 |
organism substance | 1.40e-24 | 15 |
extraembryonic structure | 1.02e-15 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.21e-40 | 1 |
cutaneous T cell lymphoma | 2.21e-40 | 1 |
mycosis fungoides | 2.21e-40 | 1 |