FFCP PHASE1:Hg19::chr10:106098270..106098302,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:106098270..106098302,+ | |||
|id=chr10:106098270..106098302,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.67e-13!42;CL:0000860!2.02e-12!45;CL:0000766!1.10e-09!76;CL:0002194!1.34e-08!63;CL:0000576!1.34e-08!63;CL:0000040!1.34e-08!63;CL:0000559!1.34e-08!63;CL:0000839!4.61e-08!70;CL:0000048!6.28e-08!430;CL:0002009!7.88e-08!65;CL:0000763!1.16e-07!112;CL:0000049!1.16e-07!112;CL:0000034!1.48e-07!444;CL:0000723!1.92e-07!436;CL:0002371!6.06e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.34e-36;33!CL:0002057;2.34e-36;33!CL:0000473;1.80e-27;39!CL:0000234;1.80e-27;39!CL:0000576;4.64e-20;48!CL:0000766;2.25e-17;69!CL:0000094;1.27e-11;8!CL:0000081;3.06e-08;11!CL:0000763;5.98e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.43e-39,42;CL:0002057,2.43e-39,42;CL:0000473,4.34e-36,48;CL:0000234,4.34e-36,48;CL:0000766,3.71e-33,72;CL:0002194,2.96e-27,59;CL:0000576,2.96e-27,59;CL:0000040,2.96e-27,59;CL:0000559,2.96e-27,59;CL:0002009,4.05e-26,61;CL:0000839,1.41e-23,66;CL:0000557,4.08e-23,67;CL:0000763,4.96e-22,108;CL:0000049,4.96e-22,108;CL:0000738,1.79e-16,136;CL:0002087,1.90e-13,115;CL:0000037,1.93e-13,168;CL:0002032,1.35e-12,161;CL:0000837,1.35e-12,161;CL:0000988,2.91e-12,177;CL:0000094,1.03e-11,8;CL:0002031,1.21e-10,120;CL:0002320,2.34e-09,361;CL:0000134,3.18e-09,354;CL:0000048,1.82e-08,427;CL:0000081,2.64e-08,11;CL:0000034,2.78e-08,441;CL:0000723,3.72e-08,433;CL:0000219,7.38e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.82e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;7.80e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.71e-08,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.22e-20,98;UBERON:0003061,4.22e-20,98;UBERON:0002193,4.70e-20,108;UBERON:0002371,1.67e-19,76;UBERON:0001474,1.54e-17,82;UBERON:0002405,3.74e-17,93;UBERON:0004765,1.39e-16,90;UBERON:0001434,3.54e-14,100;UBERON:0003081,1.90e-11,203;UBERON:0002384,9.42e-09,371;UBERON:0002204,2.91e-08,167;UBERON:0000926,6.86e-08,315;UBERON:0004120,6.86e-08,315;UBERON:0006603,6.86e-08,315 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0.85870796139317,0.136874425072884,0.251085279189606,0.0764134057479513,0.164201178899891,0.0787107813136792,1.57345710739562,1.15148819429164,0.154816123316076,0,0.30120591877825,0,1.16200800870452,0.142169232487422,0.293600439334847,8.30993112797816,4.01088894940283,6.2933152507597,0,0,0,0,0.377875943688809,0.242584061187816,3.0215774797739,2.05583944010913,5.26500830521676,3.16461631554365,2.30544635876191,3.31075121844019,15.5135556331478,13.5551783552603,14.8969135253776,1.69418105588344,0.545812300115692,1.12361742222542,8.57034898638527,4.49300637906531,7.67204550958849,0.329851300186716,0.398927315243264,0,2.32167390902867,2.8369261234557,6.22822248995575,4.77372463987812,4.17186334736161,4.34377689410233,4.84319602106695,4.78760926783834,3.79754864929061,0,0,0,0.22465726229299,0.300353785683013,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.472674085820339,0,0.351339142772504,0.196468613246569,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0.838998872419812,0.550236083880135,0.835979866147242,1.03366703667732,1.42306505074684,0.66944122552934,0.402829317109147,0.760272105718513,0.488124115096339,0,0.81014194788176,0.446498641420399,0.898117490504679,0.563057402416611,0,0.949265659568129,0.549605231791222,1.31780417436063,11.6334079244498,0,0.496971951695318,0.379891534993739,0.926864265692532,1.14734648299525,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.67355336034844,0.326923806226917,0,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0.704606991862589,0.647491777472526,0.561803226808994,0.204154171254893,0.491337269247072,0,0,0,0,0,0.336672227908132,0.625592599359821,0,0,0.30648779579902,0.300476117813194,0.113432183160021,1.07633781413317,0.213557388818567,0.423863802319124,0.600182192168805,0.309157587715317,1.8034837803194,0.558350568994769,0.506328996723799,0,2.27190396819703,0.552299391853796,0.646584227275248,0.710019185033229,0.10075209822764,0.169560592310488,0,0.272746120590835,0.573609190778008,0,0.132529768321485,0.232387885739037,0.310983165046111,0,1.09493207722749,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.330881918197182,0.217879444092406,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0.695582429850461,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0.492434012174795,1.17002132569619,0.445893486866185,0,0,0.425325291727159,0.358234090811393,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.66004457238855,0,0,0.845302752556,0,1.04007436911366,0,0,0,0.428933980974443,0,0.823240336780769,0.65147236858747,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.895304816199478,0.336255431980582,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,3.74503511973591,0,4.55857064779639,0.12269149171914,1.00034104211935,0.271265023699736,0,0.178428988797162,0.473107245101804,0.234282829985426,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0.206768026122887,1.07857100409308,1.28073069364133,0,0,0,0.248107807818777,0.767309866440312,0,0.256278298511402,0,0.482561763430822,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0.464841513839837,0,0,1.19705285616665,0.114814448164607,0.182091168006717,0.262248829918848,0,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0.877039506583738,0.522870902049801,0.256450125116389,0.656029291399411,0.650756789328606,0.515205058238611,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.676695028044854,0.308097234229289,0,0,0.322260734604821,0.145016693914229,0.681813019328807,0.445160178233687,0,0,1.65896526242959,0.50578890427775,0,0.94443704049192,1.3940745403212,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0,0,0,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0,0.731140468893853,1.05650146756755,0.272999822815972,0,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0.655894752046633,0,0.30982349809975,0,0.430234056612155,0.196498082026242,0,0.354761064070598,0.422215270595328,0.329294892959902,0,1.04980416073495,0.0962221127255121,0,1.08890984861323,0.376575203107117,0,0,0,0,2.02979043692868,1.52927441428475,1.70894156152249,0.714695326373367,0,0,0.540031437238115,0,0.213648142254946,0,0,0.185803175125719,0.432807638929335,0,0,0.199579371432817,1.91505370132367,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| |||
|short_description=p@chr10:106098270..106098302,+ | |||
}} |
Revision as of 04:53, 11 January 2014
Short description: | p@chr10:106098270..106098302, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:106098270..106098302, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.43e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-39 | 42 |
defensive cell | 4.34e-36 | 48 |
phagocyte | 4.34e-36 | 48 |
myeloid leukocyte | 3.71e-33 | 72 |
monopoietic cell | 2.96e-27 | 59 |
monocyte | 2.96e-27 | 59 |
monoblast | 2.96e-27 | 59 |
promonocyte | 2.96e-27 | 59 |
macrophage dendritic cell progenitor | 4.05e-26 | 61 |
myeloid lineage restricted progenitor cell | 1.41e-23 | 66 |
granulocyte monocyte progenitor cell | 4.08e-23 | 67 |
myeloid cell | 4.96e-22 | 108 |
common myeloid progenitor | 4.96e-22 | 108 |
leukocyte | 1.79e-16 | 136 |
nongranular leukocyte | 1.90e-13 | 115 |
hematopoietic stem cell | 1.93e-13 | 168 |
hematopoietic oligopotent progenitor cell | 1.35e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-12 | 161 |
hematopoietic cell | 2.91e-12 | 177 |
granulocyte | 1.03e-11 | 8 |
hematopoietic lineage restricted progenitor cell | 1.21e-10 | 120 |
connective tissue cell | 2.34e-09 | 361 |
mesenchymal cell | 3.18e-09 | 354 |
multi fate stem cell | 1.82e-08 | 427 |
blood cell | 2.64e-08 | 11 |
stem cell | 2.78e-08 | 441 |
somatic stem cell | 3.72e-08 | 433 |
motile cell | 7.38e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.22e-20 | 98 |
blood island | 4.22e-20 | 98 |
hemolymphoid system | 4.70e-20 | 108 |
bone marrow | 1.67e-19 | 76 |
bone element | 1.54e-17 | 82 |
immune system | 3.74e-17 | 93 |
skeletal element | 1.39e-16 | 90 |
skeletal system | 3.54e-14 | 100 |
lateral plate mesoderm | 1.90e-11 | 203 |
connective tissue | 9.42e-09 | 371 |
musculoskeletal system | 2.91e-08 | 167 |
mesoderm | 6.86e-08 | 315 |
mesoderm-derived structure | 6.86e-08 | 315 |
presumptive mesoderm | 6.86e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.71e-08 | 14 |