FFCP PHASE1:Hg19::chr10:105036887..105036903,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6057 | |||
|TSSclassifier=strong | |||
|UniProt=Q16352 | |||
|association_with_transcript=-16bp_to_ENST00000369849,NM_032727,uc001kws.2,uc009xxj.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_INA_5end | |||
|id=chr10:105036887..105036903,+ | |||
|ontology_enrichment_celltype=CL:0000133!1.91e-08!59;CL:0000221!3.93e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.76e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,4.28e-08,59;CL:0002319,1.21e-07,25;CL:0000047,3.39e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.41e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;3.47e-08;22!DOID:2994;3.47e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.93e-08,22;DOID:2994,3.93e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.05e-39!94;UBERON:0001016!5.05e-39!94;UBERON:0000924!2.08e-36!173;UBERON:0006601!2.08e-36!173;UBERON:0004121!1.99e-35!169;UBERON:0005743!2.63e-35!86;UBERON:0001017!1.55e-34!82;UBERON:0001049!7.69e-33!57;UBERON:0005068!7.69e-33!57;UBERON:0006241!7.69e-33!57;UBERON:0007135!7.69e-33!57;UBERON:0002346!5.41e-31!90;UBERON:0003075!3.15e-30!86;UBERON:0007284!3.15e-30!86;UBERON:0002616!5.21e-28!59;UBERON:0000033!2.04e-27!123;UBERON:0000955!2.81e-27!69;UBERON:0006238!2.81e-27!69;UBERON:0002780!2.08e-26!41;UBERON:0001890!2.08e-26!41;UBERON:0006240!2.08e-26!41;UBERON:0000153!5.93e-26!129;UBERON:0007811!5.93e-26!129;UBERON:0003056!1.44e-25!61;UBERON:0003080!3.72e-25!42;UBERON:0002020!4.24e-22!34;UBERON:0003528!4.24e-22!34;UBERON:0001893!6.60e-22!34;UBERON:0001869!2.94e-21!32;UBERON:0002791!3.49e-21!33;UBERON:0000119!5.00e-21!312;UBERON:0000483!2.04e-20!309;UBERON:0000475!2.49e-20!365;UBERON:0000064!8.68e-19!219;UBERON:0000922!1.15e-17!612;UBERON:0000956!4.24e-17!25;UBERON:0000203!4.24e-17!25;UBERON:0000468!1.34e-16!659;UBERON:0002619!1.51e-16!22;UBERON:0001950!1.68e-15!20;UBERON:0002050!3.87e-15!605;UBERON:0005423!3.87e-15!605;UBERON:0000467!5.08e-15!625;UBERON:0000923!5.39e-15!604;UBERON:0005291!5.39e-15!604;UBERON:0006598!5.39e-15!604;UBERON:0002532!5.39e-15!604;UBERON:0000480!8.46e-15!626;UBERON:0000481!3.02e-14!347;UBERON:0000025!3.20e-14!194;UBERON:0004111!6.98e-14!241;UBERON:0000477!5.74e-12!286;UBERON:0000062!4.75e-11!511;UBERON:0007023!8.03e-11!115;UBERON:0003076!9.24e-09!15;UBERON:0003057!9.24e-09!15;UBERON:0004732!1.83e-07!13;UBERON:0004733!4.10e-07!12;UBERON:0002028!4.10e-07!12;UBERON:0007277!4.10e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.24e-24;32!UBERON:0003528;4.34e-24;34!UBERON:0002020;4.34e-24;34!UBERON:0001893;6.28e-24;34!UBERON:0002780;6.53e-24;41!UBERON:0001890;6.53e-24;41!UBERON:0002791;8.09e-24;32!UBERON:0000073;6.27e-23;53!UBERON:0002616;6.27e-23;53!UBERON:0000956;1.72e-21;25!UBERON:0000203;1.72e-21;25!UBERON:0002619;9.01e-21;22!UBERON:0001950;2.00e-19;20!UBERON:0001016;4.46e-17;83!UBERON:0000955;1.50e-16;68!UBERON:0001017;1.95e-15;75!UBERON:0004732;1.97e-08;13!UBERON:0004733;5.50e-08;12!UBERON:0002028;5.50e-08;12!UBERON:0011216;7.41e-08;132!UBERON:0000125;7.41e-08;9!UBERON:0002308;7.41e-08;9!UBERON:0002420;1.20e-07;9!UBERON:0007245;1.20e-07;9!UBERON:0010009;1.20e-07;9!UBERON:0010011;1.20e-07;9!UBERON:0000454;1.20e-07;9!UBERON:0001894;3.79e-07;7!UBERON:0001871;4.50e-07;6!UBERON:0000200;7.89e-07;6!UBERON:0010314;7.95e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.93e-49,89;UBERON:0001017,2.11e-44,81;UBERON:0001049,1.77e-42,56;UBERON:0005068,1.77e-42,56;UBERON:0006241,1.77e-42,56;UBERON:0007135,1.77e-42,56;UBERON:0004121,1.92e-41,171;UBERON:0000924,1.92e-41,171;UBERON:0006601,1.92e-41,171;UBERON:0000073,3.43e-40,53;UBERON:0002616,3.43e-40,53;UBERON:0002346,3.99e-36,86;UBERON:0003075,1.19e-35,82;UBERON:0007284,1.19e-35,82;UBERON:0000955,4.69e-35,68;UBERON:0006238,4.69e-35,68;UBERON:0002780,2.21e-33,41;UBERON:0001890,2.21e-33,41;UBERON:0003080,2.21e-33,41;UBERON:0006240,2.21e-33,41;UBERON:0010371,2.29e-33,104;UBERON:0003056,5.33e-30,61;UBERON:0003528,7.43e-28,34;UBERON:0002020,7.43e-28,34;UBERON:0001893,1.31e-27,34;UBERON:0010314,4.76e-27,132;UBERON:0001869,8.90e-27,32;UBERON:0002791,4.38e-26,32;UBERON:0011216,5.18e-22,223;UBERON:0000956,1.91e-21,25;UBERON:0000203,1.91e-21,25;UBERON:0002619,9.72e-21,22;UBERON:0001950,2.13e-19,20;UBERON:0000119,4.74e-13,309;UBERON:0000025,9.77e-13,192;UBERON:0000483,1.70e-12,306;UBERON:0000922,3.42e-12,592;UBERON:0004111,5.50e-12,240;UBERON:0007023,6.51e-11,114;UBERON:0005423,9.40e-11,581;UBERON:0003076,3.98e-10,15;UBERON:0003057,3.98e-10,15;UBERON:0004732,1.73e-08,13;UBERON:0002050,3.96e-08,564;UBERON:0004733,4.89e-08,12;UBERON:0002028,4.89e-08,12;UBERON:0007277,4.89e-08,12;UBERON:0000923,5.67e-08,560;UBERON:0010316,5.67e-08,560;UBERON:0005291,5.67e-08,560;UBERON:0006598,5.67e-08,560;UBERON:0010317,5.67e-08,560;UBERON:0002532,5.67e-08,560;UBERON:0000125,7.83e-08,9;UBERON:0002308,7.83e-08,9;UBERON:0002420,1.26e-07,9;UBERON:0007245,1.26e-07,9;UBERON:0010009,1.26e-07,9;UBERON:0010011,1.26e-07,9;UBERON:0000454,1.26e-07,9;UBERON:0001894,3.86e-07,7;UBERON:0006222,3.86e-07,7;UBERON:0001871,4.54e-07,6;UBERON:0000200,8.06e-07,6 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,1.0007329835313,0,2.61701557230111,0,0,0.783556884599516,2.7030733015166,1.39560233594486,3.05817920982241,7.12170841216825,0.247532705920093,0.994192127183747,0.672325146451775,1.80808358407193,1.46062018077475,1.46379839637152,1.72369481307503,0.408001382488506,1.25381888591235,3.43483184557268,5.2012281527696,1.38096903554283,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0,0,0,0,0,0.945348171640679,0.886917589850256,1.84453049955565,13.9492715405064,0,0,0,0.174129737299267,0,0,0,0,0.596287222100115,1.72046919021225,0,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0,0.22452937262617,0,0,0,0.366403487860815,0,0,0,2.48485975847659,0.886413581652058,1.32409180813219,0.286836620748814,1.77334191099179,1.12135520028461,0,1.48000529050296,0.311211035399766,0.269421344139376,0,0.302714855289863,0,0.234321431833797,1.87296046098192,1.1409436430889,1.04614076386261,1.40921398372518,1.61872944368132,2.10676210053373,2.24569588380383,8.47556789451199,2.06651562351531,3.56400857184616,6.18167323196392,0.910161361938026,0,6.39677233025452,1.50142223846357,1.38532057742091,1.31693286264251,5.82326812018137,2.10333282469236,0.453728732640084,0.538168907066586,1.2813443329114,0.635795703478686,0,0.206105058476878,0.515281080091258,0.930584281657949,0,0.779496041289589,0.504867548488229,0.460249493211497,1.13152239773168,1.77504796258307,0.906768884048762,1.3564847384839,1.73934767846967,2.18196896472668,3.72845974005705,6.46460642486856,6.49395864775278,8.13357600086629,15.963802472367,11.6067591402789,13.5041622858057,1.56449532329816,27.0161194041012,23.4829366299217,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0.122988438543114,1.88724591328378,1.64625428112938,2.24803506515239,0.502644862058154,0.555530670951178,1.62904152655162,3.11980435583874,1.44331342025273,7.76733713333015,2.7003999674239,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,3.35964256397719,1.27597587518148,0.53735113621709,0.290633938513962,8.43441894163465,0,0,0,0,0,0.380987365753014,0,0,5.13217338068116,0.102827492703324,0.300343057843917,0,1.34557301214433,2.61576041299968,1.0267360014933,0.258543431515556,0,0,4.25500986535793,11.4408180602503,0.514414748524284,1.41849132023278,0.266422179016099,1.28680194292333,0,0,0,0.710783897485092,0,0.301439377059586,0,0.299918973546171,0,0,0,2.39624855491583,1.14861935834114,5.70547620162874,0.144781306667579,0.61642896765115,0.358121926479791,0,0,0,0,11.1801634657884,153.565027551994,44.8507511411063,180.917566561097,61.2421201587037,0,0,0.414415513436035,0,0.500170521059677,0.813795071099207,1.24782516918484,3.21172179834891,3.46945313074656,0.468565659970853,1.20378439891088,0,3.10419213877515,0,1.29058417979192,3.21469373531907,1.56640925970192,1.02943027143257,0,0,0,2.12189300012382,8.32177197552485,1.5119514666484,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0.804269605718038,0,0.771048469013278,2.84098760501003,1.88892458831761,0,1.74315567689939,0.362578348774867,13.4339335103201,1.10497186723076,1.03333003348146,2.54927635209404,1.70461739447251,3.60959690325929,7.85556438465031,6.27479815341484,2.92278449306521,10.7662661470733,1.13733384070897,0.340187410553031,2.37507507712353,0,3.52230368807009,3.01013864312912,4.33289664176565,2.49322802678617,1.79099803777743,0,0,5.12900250232778,0.656029291399411,0.650756789328606,0.103041011647722,14.5595449061166,14.7692004857852,0,0.650060246036521,0,0.193341436584244,0,0,0,0,0,0.340906509664404,0.534192213880424,2.97512847649761,1.53752053892085,1.02090169995667,1.51736671283325,0.929691098594572,0.31481234683064,0,0.616067160352178,1.59691809095107,0.869932992075073,0.37064843820784,0.286249773483982,1.116475108079,0.316379424718726,0,0.255897791311334,0,1.27281299170375,1.56989728039846,0.899362287916574,0.823611089208164,0.942499218765491,1.01091240786658,0,0.421258456238981,1.46290121726877,0.487426979262569,0,3.54899769660763,0.565621727814851,0,0,0.66343897524122,4.38450885253763,1.15755106853338,0.655894752046633,3.04365565444056,1.239293992399,0.563391205064483,1.00387946542836,0.589494246078727,1.07001315444375,0.709522128141196,0.422215270595328,0.329294892959902,0.75894634753143,0.349934720244983,0.192444225451024,0,0,0,0.86101074534246,3.36942951335251,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,30.2312121290749,0,0,0,0,0,10.6815602728311,0.399158742865633,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0.50054742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| |||
|short_description=p1@INA | |||
}} |
Revision as of 04:46, 11 January 2014
Short description: | p1@INA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_INA_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -16bp_to_ENST00000369849, NM_032727, uc001kws.2, uc009xxj.2_5end |
EntrezGene: | INA |
HGNC: | 6057 |
UniProt: | Q16352 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 4.28e-08 | 59 |
neural cell | 1.21e-07 | 25 |
neuronal stem cell | 3.39e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.93e-08 | 22 |
germ cell cancer | 3.93e-08 | 22 |