FFCP PHASE1:Hg19::chr10:64003214..64003251,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:64003214..64003251,+ | |||
|id=chr10:64003214..64003251,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.82e-30!42;CL:0002194!8.80e-30!63;CL:0000576!8.80e-30!63;CL:0000040!8.80e-30!63;CL:0000559!8.80e-30!63;CL:0002009!2.90e-29!65;CL:0000860!7.90e-28!45;CL:0000766!8.22e-26!76;CL:0000557!7.34e-25!71;CL:0000839!1.52e-24!70;CL:0000048!1.03e-16!430;CL:0000723!9.98e-16!436;CL:0000763!1.03e-15!112;CL:0000049!1.03e-15!112;CL:0000034!5.76e-15!444;CL:0002087!1.12e-14!119;CL:0002320!8.51e-14!365;CL:0000134!6.96e-13!358;CL:0000738!3.31e-12!140;CL:0002031!3.39e-11!124;CL:0000219!3.01e-09!390;CL:0002371!3.18e-09!591;CL:0000037!6.84e-09!172;CL:0000566!6.84e-09!172;CL:0000144!8.60e-09!625;CL:0002032!1.14e-08!165;CL:0000837!1.14e-08!165;CL:0000988!5.50e-08!182;CL:0000003!7.39e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.45e-74;33!CL:0002057;5.45e-74;33!CL:0000473;1.34e-57;39!CL:0000234;1.34e-57;39!CL:0000576;2.85e-49;48!CL:0000766;2.75e-32;69!CL:0000763;2.78e-14;100!CL:0002087;1.58e-12;104!CL:0002619;3.68e-09;3!CL:0000738;3.81e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-75,42;CL:0002057,1.12e-75,42;CL:0000473,5.66e-73,48;CL:0000234,5.66e-73,48;CL:0002194,1.63e-70,59;CL:0000576,1.63e-70,59;CL:0000040,1.63e-70,59;CL:0000559,1.63e-70,59;CL:0002009,7.06e-68,61;CL:0000766,4.82e-65,72;CL:0000839,5.65e-62,66;CL:0000557,6.73e-61,67;CL:0000763,1.10e-39,108;CL:0000049,1.10e-39,108;CL:0002087,7.49e-33,115;CL:0000738,8.88e-31,136;CL:0002031,2.24e-29,120;CL:0002032,6.10e-23,161;CL:0000837,6.10e-23,161;CL:0000037,9.45e-23,168;CL:0000988,5.08e-21,177;CL:0000134,2.31e-17,354;CL:0002320,9.51e-17,361;CL:0000219,1.39e-14,386;CL:0000048,3.59e-14,427;CL:0000723,9.05e-14,433;CL:0000034,2.98e-13,441;CL:0002619,2.94e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.13e-55;42!CL:0000049;1.12e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.03e-24!80;UBERON:0002204!1.98e-22!167;UBERON:0002390!3.82e-22!102;UBERON:0003061!3.82e-22!102;UBERON:0002193!3.09e-21!112;UBERON:0001474!1.17e-20!86;UBERON:0004765!1.19e-19!101;UBERON:0001434!1.19e-19!101;UBERON:0002405!7.06e-19!115;UBERON:0002384!1.04e-12!375;UBERON:0003081!5.18e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.72e-58,76;UBERON:0001474,3.06e-53,82;UBERON:0004765,1.52e-47,90;UBERON:0002405,1.17e-45,93;UBERON:0002390,5.76e-45,98;UBERON:0003061,5.76e-45,98;UBERON:0001434,4.87e-44,100;UBERON:0002193,9.07e-40,108;UBERON:0002204,7.87e-26,167;UBERON:0003081,4.24e-25,203;UBERON:0002384,6.56e-16,371;UBERON:0000926,6.48e-15,315;UBERON:0004120,6.48e-15,315;UBERON:0006603,6.48e-15,315 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0.164201178899891,0,0,1.15148819429164,0.464448369948228,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0,7.20194031091441,5.41470008169383,1.51907609501096,1.56740831967947,3.2389366601898,3.8636335145128,1.45398238779565,1.51150377475524,0.485168122375632,14.1781712512468,19.3248907370258,21.3697395917621,31.0707783707923,23.8229457072064,38.783085701728,32.7508396699788,32.2742341791913,18.9597081232078,8.094420600332,13.0994952027766,16.4048143644912,21.4258724659632,38.1905542220551,22.3767994029664,3.29851300186716,8.37747362010854,3.40979800426155,26.9894591924583,35.1778839308507,25.5357122088186,20.8536392163097,19.2948679815475,26.4970390540242,23.005181100068,65.5534192057865,43.0388846919603,0,0.425208599930087,0.209658645508376,1.23561494261145,1.05123824989054,0.803627933485401,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0,0,0.501559486172034,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.650296737799391,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0,0,0.741568885568859,0.649094787309367,0.696518949197069,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,3.97227542439656,2.86836620748814,0,1.12135520028461,1.06748995729705,0,1.8672662123986,0.404132016209064,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0.280901613404497,1.63323337003915,0,1.13658359293342,0,0.494533858557114,0.910161361938026,0,0,0,0.554128230968366,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,1.06778694409284,1.69545520927649,0.300091096084402,0.309157587715317,0.257640540045629,0.37223371266318,0,0,0.504867548488229,0.736399189138395,0.323292113637624,0,0.10075209822764,0.169560592310488,0.57978255948989,0.545492241181669,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.761016608938393,0,0,1.96973604869918,1.17002132569619,0.743155811443641,0,0.335964256397719,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.868687840005475,0.410952645100767,0.179060963239896,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,1.24324654030811,0.24538298343828,0.500170521059677,0.271265023699736,0.623912584592421,1.24900292158013,1.41932173530541,0.585707074963566,0,0,0,0,0,0.347534457872331,0,0.343143423810856,0.413536052245775,1.07857100409308,0.853820462427555,0,0,0,0.744323423456331,0.767309866440312,0.841980283299221,0.384417447767103,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0.184161977871793,0.68888668898764,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0.616194468458578,0.307007349452259,0.137836572484531,0.429680979473094,0.145016693914229,0.0852266274161009,0.178064071293475,0.826424576804891,0,2.29702882490251,0.50578890427775,0,0.94443704049192,0.6970372701606,0,0,0,0.18532421910392,0.429374660225974,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0,0,1.22849920267187,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,3.95153871551882,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.586032717087576,0,0.111443384277478,0,0,0,0,0,0,0.779160935160341,0.16480387422676,0,0,0,0,0,0,0.933118762985422,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.569710279235006,0,0,0,0,0.366390373607449,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.543616824294456,0.418411385249333,0.101998217636322,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.295282444544246,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,1.34340638123612,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0.5013797880454,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0.189403005275089,1.25783950876288,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| |||
|short_description=p@chr10:64003214..64003251,+ | |||
}} |
Revision as of 03:03, 11 January 2014
Short description: | p@chr10:64003214..64003251, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:64003214..64003251, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.12e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-75 | 42 |
defensive cell | 5.66e-73 | 48 |
phagocyte | 5.66e-73 | 48 |
monopoietic cell | 1.63e-70 | 59 |
monocyte | 1.63e-70 | 59 |
monoblast | 1.63e-70 | 59 |
promonocyte | 1.63e-70 | 59 |
macrophage dendritic cell progenitor | 7.06e-68 | 61 |
myeloid leukocyte | 4.82e-65 | 72 |
myeloid lineage restricted progenitor cell | 5.65e-62 | 66 |
granulocyte monocyte progenitor cell | 6.73e-61 | 67 |
myeloid cell | 1.10e-39 | 108 |
common myeloid progenitor | 1.10e-39 | 108 |
nongranular leukocyte | 7.49e-33 | 115 |
leukocyte | 8.88e-31 | 136 |
hematopoietic lineage restricted progenitor cell | 2.24e-29 | 120 |
hematopoietic oligopotent progenitor cell | 6.10e-23 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-23 | 161 |
hematopoietic stem cell | 9.45e-23 | 168 |
hematopoietic cell | 5.08e-21 | 177 |
mesenchymal cell | 2.31e-17 | 354 |
connective tissue cell | 9.51e-17 | 361 |
motile cell | 1.39e-14 | 386 |
multi fate stem cell | 3.59e-14 | 427 |
somatic stem cell | 9.05e-14 | 433 |
stem cell | 2.98e-13 | 441 |
adult endothelial progenitor cell | 2.94e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.72e-58 | 76 |
bone element | 3.06e-53 | 82 |
skeletal element | 1.52e-47 | 90 |
immune system | 1.17e-45 | 93 |
hematopoietic system | 5.76e-45 | 98 |
blood island | 5.76e-45 | 98 |
skeletal system | 4.87e-44 | 100 |
hemolymphoid system | 9.07e-40 | 108 |
musculoskeletal system | 7.87e-26 | 167 |
lateral plate mesoderm | 4.24e-25 | 203 |
connective tissue | 6.56e-16 | 371 |
mesoderm | 6.48e-15 | 315 |
mesoderm-derived structure | 6.48e-15 | 315 |
presumptive mesoderm | 6.48e-15 | 315 |