FFCP PHASE1:Hg19::chr10:30723105..30723122,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1326 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6860 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T857 | |||
|association_with_transcript=35bp_to_ENST00000415139_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_MAP3K8_5end | |||
|id=chr10:30723105..30723122,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.29e-37!140;CL:0000766!5.63e-35!76;CL:0000037!1.54e-33!172;CL:0000566!1.54e-33!172;CL:0000557!1.23e-31!71;CL:0002032!3.12e-31!165;CL:0000837!3.12e-31!165;CL:0000988!4.64e-31!182;CL:0000763!2.69e-30!112;CL:0000049!2.69e-30!112;CL:0000839!1.09e-28!70;CL:0002031!1.31e-28!124;CL:0002009!1.46e-28!65;CL:0002194!2.58e-27!63;CL:0000576!2.58e-27!63;CL:0000040!2.58e-27!63;CL:0000559!2.58e-27!63;CL:0002057!3.44e-27!42;CL:0002087!5.92e-27!119;CL:0000860!7.31e-26!45;CL:0000134!2.13e-20!358;CL:0002320!1.95e-18!365;CL:0000048!2.81e-13!430;CL:0000219!3.50e-13!390;CL:0000723!1.08e-11!436;CL:0000034!1.18e-11!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.64e-20;33!CL:0002057;3.64e-20;33!CL:0000473;1.93e-18;39!CL:0000234;1.93e-18;39!CL:0000576;1.63e-16;48!CL:0000766;1.26e-15;69!CL:0000738;7.82e-09;136!CL:0000763;8.70e-09;100!CL:0002087;1.36e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.78e-37,136;CL:0000766,9.26e-36,72;CL:0000037,1.75e-33,168;CL:0000557,2.19e-32,67;CL:0000988,1.18e-31,177;CL:0002032,3.51e-31,161;CL:0000837,3.51e-31,161;CL:0000763,1.99e-30,108;CL:0000049,1.99e-30,108;CL:0000839,2.44e-29,66;CL:0002009,2.66e-29,61;CL:0000473,4.42e-29,48;CL:0000234,4.42e-29,48;CL:0002031,8.83e-29,120;CL:0002194,4.87e-28,59;CL:0000576,4.87e-28,59;CL:0000040,4.87e-28,59;CL:0000559,4.87e-28,59;CL:0000860,3.06e-27,42;CL:0002057,3.06e-27,42;CL:0002087,4.04e-27,115;CL:0000134,9.69e-21,354;CL:0002320,9.44e-19,361;CL:0000219,1.45e-13,386;CL:0000048,2.37e-13,427;CL:0000723,8.61e-12,433;CL:0000034,1.01e-11,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.28e-20;42!CL:0000049;1.11e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.33e-34!102;UBERON:0003061!8.33e-34!102;UBERON:0002193!4.75e-31!112;UBERON:0002371!4.13e-28!80;UBERON:0001474!1.47e-24!86;UBERON:0002405!1.74e-22!115;UBERON:0004765!3.59e-18!101;UBERON:0001434!3.59e-18!101;UBERON:0002384!8.52e-18!375;UBERON:0003081!4.14e-15!216;UBERON:0002204!4.39e-08!167;UBERON:0000178!5.65e-07!15;UBERON:0000179!5.65e-07!15;UBERON:0000463!5.65e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.35e-07;15!UBERON:0000179;5.35e-07;15!UBERON:0000463;5.35e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.35e-34,98;UBERON:0003061,2.35e-34,98;UBERON:0002193,1.67e-31,108;UBERON:0002371,9.64e-29,76;UBERON:0002405,2.07e-25,93;UBERON:0001474,5.36e-25,82;UBERON:0004765,5.14e-20,90;UBERON:0002384,3.56e-18,371;UBERON:0003081,6.39e-17,203;UBERON:0001434,1.05e-16,100;UBERON:0000926,3.92e-09,315;UBERON:0004120,3.92e-09,315;UBERON:0006603,3.92e-09,315;UBERON:0002204,4.02e-07,167;UBERON:0000178,5.51e-07,15;UBERON:0000179,5.51e-07,15;UBERON:0000463,5.51e-07,15 | |||
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| |||
|short_description=p1@MAP3K8 | |||
}} |
Revision as of 02:24, 11 January 2014
Short description: | p1@MAP3K8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAP3K8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 35bp_to_ENST00000415139_5end |
EntrezGene: | MAP3K8 |
HGNC: | 6860 |
UniProt: | Q5T857 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.78e-37 | 136 |
myeloid leukocyte | 9.26e-36 | 72 |
hematopoietic stem cell | 1.75e-33 | 168 |
granulocyte monocyte progenitor cell | 2.19e-32 | 67 |
hematopoietic cell | 1.18e-31 | 177 |
hematopoietic oligopotent progenitor cell | 3.51e-31 | 161 |
hematopoietic multipotent progenitor cell | 3.51e-31 | 161 |
myeloid cell | 1.99e-30 | 108 |
common myeloid progenitor | 1.99e-30 | 108 |
myeloid lineage restricted progenitor cell | 2.44e-29 | 66 |
macrophage dendritic cell progenitor | 2.66e-29 | 61 |
defensive cell | 4.42e-29 | 48 |
phagocyte | 4.42e-29 | 48 |
hematopoietic lineage restricted progenitor cell | 8.83e-29 | 120 |
monopoietic cell | 4.87e-28 | 59 |
monocyte | 4.87e-28 | 59 |
monoblast | 4.87e-28 | 59 |
promonocyte | 4.87e-28 | 59 |
classical monocyte | 3.06e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.06e-27 | 42 |
nongranular leukocyte | 4.04e-27 | 115 |
mesenchymal cell | 9.69e-21 | 354 |
connective tissue cell | 9.44e-19 | 361 |
motile cell | 1.45e-13 | 386 |
multi fate stem cell | 2.37e-13 | 427 |
somatic stem cell | 8.61e-12 | 433 |
stem cell | 1.01e-11 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.35e-34 | 98 |
blood island | 2.35e-34 | 98 |
hemolymphoid system | 1.67e-31 | 108 |
bone marrow | 9.64e-29 | 76 |
immune system | 2.07e-25 | 93 |
bone element | 5.36e-25 | 82 |
skeletal element | 5.14e-20 | 90 |
connective tissue | 3.56e-18 | 371 |
lateral plate mesoderm | 6.39e-17 | 203 |
skeletal system | 1.05e-16 | 100 |
mesoderm | 3.92e-09 | 315 |
mesoderm-derived structure | 3.92e-09 | 315 |
presumptive mesoderm | 3.92e-09 | 315 |
musculoskeletal system | 4.02e-07 | 167 |
blood | 5.51e-07 | 15 |
haemolymphatic fluid | 5.51e-07 | 15 |
organism substance | 5.51e-07 | 15 |