FFCP PHASE1:Hg19::chr10:28691530..28691544,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:28691530..28691544,- | |||
|id=chr10:28691530..28691544,- | |||
|ontology_enrichment_celltype=CL:0002057!7.29e-121!42;CL:0000860!3.39e-112!45;CL:0002009!6.10e-82!65;CL:0000766!1.97e-77!76;CL:0002194!3.63e-76!63;CL:0000576!3.63e-76!63;CL:0000040!3.63e-76!63;CL:0000559!3.63e-76!63;CL:0000557!2.52e-74!71;CL:0000839!9.45e-68!70;CL:0000738!2.21e-56!140;CL:0000763!5.09e-55!112;CL:0000049!5.09e-55!112;CL:0002087!1.24e-50!119;CL:0002031!1.41e-45!124;CL:0000037!5.26e-44!172;CL:0000566!5.26e-44!172;CL:0000988!5.05e-41!182;CL:0002032!6.54e-40!165;CL:0000837!6.54e-40!165;CL:0002393!5.88e-33!9;CL:0002397!5.88e-33!9;CL:0000134!1.28e-16!358;CL:0002320!4.30e-16!365;CL:0000219!3.07e-14!390;CL:0000034!6.33e-13!444;CL:0000048!8.02e-13!430;CL:0000767!1.07e-12!3;CL:0000723!1.71e-12!436;CL:0000842!8.24e-12!3;CL:0000875!2.97e-11!3;CL:0002396!2.97e-11!3;CL:0000224!5.76e-09!4;CL:0000094!3.91e-08!8;CL:0001014!4.70e-08!2;CL:0001016!4.70e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.33e-51;33!CL:0002057;3.33e-51;33!CL:0000576;8.88e-42;48!CL:0002393;2.81e-40;6!CL:0002397;2.81e-40;6!CL:0000473;6.08e-35;39!CL:0000234;6.08e-35;39!CL:0000766;1.56e-30;69!CL:0000767;3.37e-21;3!CL:0000763;2.57e-15;100!CL:0000094;7.69e-14;8!CL:0002087;4.16e-12;104!CL:0000081;4.19e-10;11!CL:0000226;1.74e-09;3!CL:0000842;1.74e-09;3!CL:0000738;9.74e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.25e-80,42;CL:0002057,4.25e-80,42;CL:0000473,1.45e-69,48;CL:0000234,1.45e-69,48;CL:0000766,1.92e-62,72;CL:0002194,8.28e-55,59;CL:0000576,8.28e-55,59;CL:0000040,8.28e-55,59;CL:0000559,8.28e-55,59;CL:0002009,6.65e-53,61;CL:0000839,1.23e-48,66;CL:0000557,7.35e-48,67;CL:0000763,2.67e-40,108;CL:0000049,2.67e-40,108;CL:0000738,2.07e-36,136;CL:0002087,1.67e-31,115;CL:0000037,1.31e-28,168;CL:0000988,6.41e-27,177;CL:0002393,1.04e-26,9;CL:0002397,1.04e-26,9;CL:0002032,1.42e-25,161;CL:0000837,1.42e-25,161;CL:0002031,5.31e-25,120;CL:0000767,3.37e-21,3;CL:0000094,7.32e-14,8;CL:0000134,5.18e-11,354;CL:0002320,1.06e-10,361;CL:0000081,4.04e-10,11;CL:0000219,1.34e-09,386;CL:0000226,1.40e-09,3;CL:0000842,1.40e-09,3;CL:0000034,1.08e-08,441;CL:0000048,3.00e-08,427;CL:0000723,4.61e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.75e-61;42!CL:0000049;1.68e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.17e-65!80;UBERON:0001474!7.09e-60!86;UBERON:0002390!8.40e-58!102;UBERON:0003061!8.40e-58!102;UBERON:0002193!8.20e-52!112;UBERON:0004765!1.13e-49!101;UBERON:0001434!1.13e-49!101;UBERON:0002405!1.56e-42!115;UBERON:0002204!5.27e-28!167;UBERON:0003081!3.11e-22!216;UBERON:0002384!2.24e-15!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.12e-42,76;UBERON:0001474,1.95e-38,82;UBERON:0002390,1.08e-37,98;UBERON:0003061,1.08e-37,98;UBERON:0004765,1.12e-34,90;UBERON:0002193,8.08e-34,108;UBERON:0002405,1.96e-33,93;UBERON:0001434,8.14e-31,100;UBERON:0002204,8.96e-17,167;UBERON:0003081,6.43e-16,203;UBERON:0002384,2.83e-10,371;UBERON:0000926,1.36e-08,315;UBERON:0004120,1.36e-08,315;UBERON:0006603,1.36e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,6.1412703695554,8.3600706590681,0,0,0,0,0,0,16.0658668474244,17.2468224824322,11.9355978893719,0,0,0,0.290796477559129,0,0,2.55671940596253,4.52284676824008,0.309706370895104,4.02769349251011,5.37937483711111,0.236482229888585,38.9562619232379,37.4381116478619,8.12558919566051,1.50593871634084,0.272906150057846,0.224723484445085,22.6502080354468,19.8975996787178,3.19668562899521,0.329851300186716,1.19678194572979,0,0.290209238628584,1.13477044938228,0,2.51248665256743,3.12889751052121,0.65156653411535,1.21079900526674,3.68277635987565,0.316462387440884,2.5350634357433,4.46469029926591,2.09658645508376,0.786300418025466,0.750884464207532,0.16072558669708,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.50999940573032,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:28691530..28691544,- | |||
}} |
Revision as of 02:20, 11 January 2014
Short description: | p@chr10:28691530..28691544, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:28691530..28691544, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.12e-42 | 76 |
bone element | 1.95e-38 | 82 |
hematopoietic system | 1.08e-37 | 98 |
blood island | 1.08e-37 | 98 |
skeletal element | 1.12e-34 | 90 |
hemolymphoid system | 8.08e-34 | 108 |
immune system | 1.96e-33 | 93 |
skeletal system | 8.14e-31 | 100 |
musculoskeletal system | 8.96e-17 | 167 |
lateral plate mesoderm | 6.43e-16 | 203 |
connective tissue | 2.83e-10 | 371 |
mesoderm | 1.36e-08 | 315 |
mesoderm-derived structure | 1.36e-08 | 315 |
presumptive mesoderm | 1.36e-08 | 315 |