FFCP PHASE1:Hg19::chr10:6881935..6881939,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:6881935..6881939,+ | |||
|id=chr10:6881935..6881939,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.08e-12!25;CL:0000047!3.27e-11!8;CL:0000540!2.53e-08!6;CL:0000031!2.53e-08!6;CL:0000404!2.53e-08!6;CL:0002605!4.87e-07!3;CL:0000128!6.16e-07!7;CL:0000126!6.16e-07!7;CL:0000127!6.16e-07!7;CL:0002453!6.16e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.14e-29;25!CL:0002605;2.46e-22;3!CL:0000540;6.69e-19;6!CL:0000404;6.69e-19;6!CL:0000128;8.23e-17;7!CL:0000126;8.23e-17;7!CL:0000127;8.23e-17;7!CL:0000243;1.64e-14;15!CL:0000125;1.64e-14;15!CL:0000095;6.26e-13;17!CL:0002327;7.56e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.69e-29,25;CL:0002605,2.47e-22,3;CL:0000047,1.34e-21,8;CL:0000540,6.26e-19,6;CL:0000031,6.26e-19,6;CL:0000404,6.26e-19,6;CL:0000128,8.25e-17,7;CL:0000126,8.25e-17,7;CL:0000127,8.25e-17,7;CL:0002453,8.25e-17,7;CL:0000243,2.04e-14,15;CL:0000125,2.04e-14,15;CL:0000030,2.04e-14,15;CL:0000339,2.04e-14,15;CL:0000095,7.59e-13,17;CL:0000123,7.59e-13,17;CL:0000133,6.97e-12,59;CL:0000221,2.67e-11,72;CL:0002327,6.71e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000031;6.69e-19;6!CL:0000339;1.64e-14;15!CL:0000133;7.41e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.05e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.56e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.12e-10,81;UBERON:0001016,1.07e-08,89;UBERON:0001911,6.71e-08,4;UBERON:0005333,6.71e-08,4;UBERON:0008425,6.71e-08,4;UBERON:0005311,6.71e-08,4;UBERON:0004121,4.59e-07,171;UBERON:0000924,4.59e-07,171;UBERON:0006601,4.59e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,3.72106783270374,13.1399448069969,4.3939923858181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0.179389635688862,0,0,0,0.515262646192195,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,1.45990943630332,0,0,0,0,0,0.354920400119532,0,0,0,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0.402115889646523,0.833296006426766,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,1.43293636324557,2.90633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,2.83698264046557,1.0656887160644,0.142977993658148,0,0.823240336780769,0,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.670065061337395,1.27587750330633,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02578175658972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0,0,0,0,0,0,0.576570202095319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,10.9427490277306,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,0.330991955875499,1.56966459203613,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0,0.548167698587004,0.19871461170299,0,0,0.480952921509202,0.640358984218058,0,0,0,0,7.63490429337193,2.11229310461235,1.88555227693436,1.08723364858891,1.15063130943567,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.62776056180637,7.06248574649615,0,0,0,0.335434687599266,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,12.6104376482774,0,0,1.56215619722769,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,1.06374456795571,0,0,0,0,0,0,0,0,0,0,0,0,1.24329698497822,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,2.56027642462766,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764859003745869,0,0.101988829741982,0,0.36757959813938,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0,0.653150243690884,0,0,0,0,0,1.3874554964103,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:6881935..6881939,+ | |||
}} |
Revision as of 01:36, 11 January 2014
Short description: | p@chr10:6881935..6881939, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:6881935..6881939, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.69e-29 | 25 |
astrocyte of the cerebral cortex | 2.47e-22 | 3 |
neuronal stem cell | 1.34e-21 | 8 |
neuron | 6.26e-19 | 6 |
neuroblast | 6.26e-19 | 6 |
electrically signaling cell | 6.26e-19 | 6 |
oligodendrocyte | 8.25e-17 | 7 |
macroglial cell | 8.25e-17 | 7 |
astrocyte | 8.25e-17 | 7 |
oligodendrocyte precursor cell | 8.25e-17 | 7 |
glial cell (sensu Vertebrata) | 2.04e-14 | 15 |
glial cell | 2.04e-14 | 15 |
glioblast | 2.04e-14 | 15 |
glioblast (sensu Vertebrata) | 2.04e-14 | 15 |
neuron associated cell | 7.59e-13 | 17 |
neuron associated cell (sensu Vertebrata) | 7.59e-13 | 17 |
neurectodermal cell | 6.97e-12 | 59 |
ectodermal cell | 2.67e-11 | 72 |
mammary gland epithelial cell | 6.71e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.12e-10 | 81 |
nervous system | 1.07e-08 | 89 |
mammary gland | 6.71e-08 | 4 |
mammary bud | 6.71e-08 | 4 |
mammary ridge | 6.71e-08 | 4 |
mammary placode | 6.71e-08 | 4 |
ectoderm-derived structure | 4.59e-07 | 171 |
ectoderm | 4.59e-07 | 171 |
presumptive ectoderm | 4.59e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.05e-08 | 1 |