FFCP PHASE1:Hg19::chr10:5138470..5138477,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1314 | |||
|description=CAGE_peak_at_chr10:5138470..5138477,+ | |||
|id=chr10:5138470..5138477,+ | |||
|ontology_enrichment_celltype=CL:0002553!7.13e-15!1;CL:0001014!4.69e-08!2;CL:0001016!4.69e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.92e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.48e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.40e-21;13!UBERON:0001041;8.87e-21;30!UBERON:0004161;2.47e-07;11 | |||
|ontology_enrichment_disease=DOID:0050619!2.41e-14!1;DOID:1357!2.41e-14!1;DOID:0050615!4.17e-08!16;DOID:305!2.76e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:7,6.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001764!2.41e-14!1;UBERON:0001825!2.41e-14!1;UBERON:0001737!1.09e-13!9;UBERON:0004921!4.36e-09!129;UBERON:0004185!4.36e-09!129;UBERON:0001007!5.14e-09!155;UBERON:0001555!5.14e-09!155;UBERON:0007026!5.14e-09!155;UBERON:0008947!1.07e-08!38;UBERON:0003258!1.07e-08!38;UBERON:0002294!1.32e-08!7;UBERON:0001173!1.32e-08!7;UBERON:0004912!1.32e-08!7;UBERON:0004119!3.69e-08!169;UBERON:0000925!3.69e-08!169;UBERON:0006595!3.69e-08!169;UBERON:0000072!3.60e-07!46;UBERON:0001557!8.98e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;8.69e-18;4!UBERON:0003928;8.69e-18;4!UBERON:0002423;1.09e-11;25!UBERON:0002294;8.99e-11;7!UBERON:0001173;8.99e-11;7!UBERON:0000058;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,3.77e-13,22;UBERON:0003894,3.77e-13,22;UBERON:0009854,1.25e-12,23;UBERON:0002394,2.45e-12,6;UBERON:0003928,2.45e-12,6;UBERON:0007499,1.03e-11,25;UBERON:0009497,1.03e-11,25;UBERON:0000015,1.03e-11,25;UBERON:0002423,1.03e-11,25;UBERON:0006235,1.03e-11,25;UBERON:0004161,1.03e-11,25;UBERON:0009856,2.63e-11,26;UBERON:0002294,1.12e-08,9;UBERON:0001173,1.12e-08,9;UBERON:0004912,1.12e-08,9;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68531762013414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95282444544246,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56630256826494,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:5138470..5138477,+ | |||
}} |
Revision as of 01:30, 11 January 2014
Short description: | p@chr10:5138470..5138477, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5138470..5138477, + |
Coexpression cluster: | C1314_bile_lung_hepatoma_Hepatocyte_Mast_choriocarcinoma_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 3.77e-13 | 22 |
liver primordium | 3.77e-13 | 22 |
digestive tract diverticulum | 1.25e-12 | 23 |
bile duct | 2.45e-12 | 6 |
digestive system duct | 2.45e-12 | 6 |
epithelial sac | 1.03e-11 | 25 |
epithelium of foregut-midgut junction | 1.03e-11 | 25 |
anatomical boundary | 1.03e-11 | 25 |
hepatobiliary system | 1.03e-11 | 25 |
foregut-midgut junction | 1.03e-11 | 25 |
septum transversum | 1.03e-11 | 25 |
sac | 2.63e-11 | 26 |
biliary system | 1.12e-08 | 9 |
biliary tree | 1.12e-08 | 9 |
biliary bud | 1.12e-08 | 9 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 6.60e-08 | 39 |