FFCP PHASE1:Hg19::chr10:3511403..3511417,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:3511403..3511417,- | |||
|id=chr10:3511403..3511417,- | |||
|ontology_enrichment_celltype=CL:0002057!4.34e-46!42;CL:0000860!3.92e-42!45;CL:0002009!3.07e-31!65;CL:0002194!6.47e-31!63;CL:0000576!6.47e-31!63;CL:0000040!6.47e-31!63;CL:0000559!6.47e-31!63;CL:0000766!6.53e-30!76;CL:0000557!1.73e-27!71;CL:0000839!1.53e-26!70;CL:0000763!4.32e-22!112;CL:0000049!4.32e-22!112;CL:0000738!2.20e-19!140;CL:0002087!8.59e-17!119;CL:0000037!2.55e-14!172;CL:0000566!2.55e-14!172;CL:0002031!1.05e-13!124;CL:0002032!3.30e-13!165;CL:0000837!3.30e-13!165;CL:0000988!1.12e-12!182;CL:0000134!2.26e-12!358;CL:0002320!1.07e-11!365;CL:0000219!2.35e-09!390;CL:0000048!2.82e-09!430;CL:0000723!3.05e-09!436;CL:0000034!1.17e-08!444;CL:0000063!1.99e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.56e-70;33!CL:0002057;4.56e-70;33!CL:0000473;7.65e-47;39!CL:0000234;7.65e-47;39!CL:0000576;3.65e-41;48!CL:0000766;2.98e-22;69!CL:0002087;3.14e-13;104!CL:0000763;3.63e-11;100!CL:0000136;3.22e-10;13!CL:0002393;4.93e-09;6!CL:0002397;4.93e-09;6!CL:0000738;8.39e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.58e-77,42;CL:0002057,2.58e-77,42;CL:0000473,5.46e-67,48;CL:0000234,5.46e-67,48;CL:0002194,1.58e-52,59;CL:0000576,1.58e-52,59;CL:0000040,1.58e-52,59;CL:0000559,1.58e-52,59;CL:0002009,1.16e-50,61;CL:0000839,1.76e-46,66;CL:0000766,8.22e-46,72;CL:0000557,1.02e-45,67;CL:0002087,4.20e-29,115;CL:0000763,7.41e-29,108;CL:0000049,7.41e-29,108;CL:0000738,8.68e-26,136;CL:0002031,1.81e-25,120;CL:0000037,8.48e-20,168;CL:0002032,3.15e-19,161;CL:0000837,3.15e-19,161;CL:0000988,1.68e-18,177;CL:0000134,1.74e-13,354;CL:0002320,4.29e-13,361;CL:0000219,1.02e-11,386;CL:0000048,5.87e-11,427;CL:0000723,1.03e-10,433;CL:0000034,2.15e-10,441;CL:0000136,8.63e-09,15 | |||
|ontology_enrichment_development_v019=CL:0002057;6.32e-56;42!CL:0000049;7.39e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.89e-27!80;UBERON:0001474!1.45e-24!86;UBERON:0002193!2.21e-23!112;UBERON:0002390!2.27e-23!102;UBERON:0003061!2.27e-23!102;UBERON:0004765!3.60e-22!101;UBERON:0001434!3.60e-22!101;UBERON:0002405!7.11e-19!115;UBERON:0003081!1.61e-11!216;UBERON:0002384!2.49e-11!375;UBERON:0002204!1.05e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.47e-43,76;UBERON:0001474,1.15e-39,82;UBERON:0004765,1.08e-35,90;UBERON:0002390,4.47e-35,98;UBERON:0003061,4.47e-35,98;UBERON:0002405,2.23e-34,93;UBERON:0001434,1.30e-31,100;UBERON:0002193,2.45e-31,108;UBERON:0002204,2.27e-18,167;UBERON:0003081,2.01e-15,203;UBERON:0002384,1.46e-12,371;UBERON:0000926,1.39e-09,315;UBERON:0004120,1.39e-09,315;UBERON:0006603,1.39e-09,315 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,0.77408061658038,0,0,0,0,0,0,9.41792194504192,2.80762226458198,3.03815219002193,0,0,0.257575567634187,0.581592955118259,0,0.970336244751265,1.39457422143411,0.411167888021826,1.23882548358041,1.1507695692886,4.35473201099471,4.02019790810595,8.27389633767885,2.5819387343353,6.77132432971709,0,1.36453075028923,0.674170453335254,11.0190201253525,6.73950956859797,7.67204550958849,0.989553900560148,2.59302754908121,0.852449501065388,7.54544020434318,1.70215567407342,2.4912889959823,2.76373531782418,3.12889751052121,4.12658804939722,2.42159801053347,6.99727508376373,5.37986058649504,0.211255286311942,0.425208599930087,0.209658645508376,0.561643155732475,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0.476981248610684,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,1.06727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,1.03850885836724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0.568272293612826,0,0,0.614321404198464,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0.638002319463839,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,2.72008901684737,2.7575888342497,2.75711019087115,2.29510841496863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0.310874401165561,0,0,0,0.155262956876259,1.24411862352257,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.327130788511688,0,0.245772908753719,0,0,0,1.54993481694734,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:3511403..3511417,- | |||
}} |
Revision as of 01:23, 11 January 2014
Short description: | p@chr10:3511403..3511417, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3511403..3511417, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.58e-77 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.58e-77 | 42 |
defensive cell | 5.46e-67 | 48 |
phagocyte | 5.46e-67 | 48 |
monopoietic cell | 1.58e-52 | 59 |
monocyte | 1.58e-52 | 59 |
monoblast | 1.58e-52 | 59 |
promonocyte | 1.58e-52 | 59 |
macrophage dendritic cell progenitor | 1.16e-50 | 61 |
myeloid lineage restricted progenitor cell | 1.76e-46 | 66 |
myeloid leukocyte | 8.22e-46 | 72 |
granulocyte monocyte progenitor cell | 1.02e-45 | 67 |
nongranular leukocyte | 4.20e-29 | 115 |
myeloid cell | 7.41e-29 | 108 |
common myeloid progenitor | 7.41e-29 | 108 |
leukocyte | 8.68e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 1.81e-25 | 120 |
hematopoietic stem cell | 8.48e-20 | 168 |
hematopoietic oligopotent progenitor cell | 3.15e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.15e-19 | 161 |
hematopoietic cell | 1.68e-18 | 177 |
mesenchymal cell | 1.74e-13 | 354 |
connective tissue cell | 4.29e-13 | 361 |
motile cell | 1.02e-11 | 386 |
multi fate stem cell | 5.87e-11 | 427 |
somatic stem cell | 1.03e-10 | 433 |
stem cell | 2.15e-10 | 441 |
fat cell | 8.63e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.47e-43 | 76 |
bone element | 1.15e-39 | 82 |
skeletal element | 1.08e-35 | 90 |
hematopoietic system | 4.47e-35 | 98 |
blood island | 4.47e-35 | 98 |
immune system | 2.23e-34 | 93 |
skeletal system | 1.30e-31 | 100 |
hemolymphoid system | 2.45e-31 | 108 |
musculoskeletal system | 2.27e-18 | 167 |
lateral plate mesoderm | 2.01e-15 | 203 |
connective tissue | 1.46e-12 | 371 |
mesoderm | 1.39e-09 | 315 |
mesoderm-derived structure | 1.39e-09 | 315 |
presumptive mesoderm | 1.39e-09 | 315 |