FFCP PHASE1:Hg19::chr1:241577012..241577023,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1853 | |||
|description=CAGE_peak_at_chr1:241577012..241577023,+ | |||
|id=chr1:241577012..241577023,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.94e-16!75;CL:0002620!7.61e-15!23;CL:0002556!2.14e-14!6;CL:0002551!5.71e-14!6;CL:0000055!1.05e-08!180;CL:0002552!3.66e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002552;1.63e-23;5!CL:0000222;1.25e-13;1!CL:0002556;2.45e-09;6!CL:0002551;3.86e-09;6!CL:0000057;1.31e-08;73!CL:0002363;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,1.63e-23,5;CL:0000057,9.89e-10,76;CL:0002556,2.56e-09,6;CL:0002551,4.03e-09,6;CL:0002363,1.54e-07,2;CL:0000008,1.54e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.28e-17;3!CL:0000008;1.87e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;6.23e-14;1!DOID:3451;1.32e-07;2!DOID:4159;1.32e-07;2!DOID:0060122;1.32e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,5.85e-14,1;DOID:3451,1.28e-07,2;DOID:4159,1.28e-07,2;DOID:0060122,1.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001758!2.14e-14!6;UBERON:0003672!2.14e-14!6;UBERON:0003102!6.16e-14!95;UBERON:0002067!3.43e-09!9;UBERON:0004016!3.43e-09!9;UBERON:0010083!3.43e-09!9;UBERON:0002097!3.44e-09!40;UBERON:0002199!6.90e-08!45;UBERON:0002416!6.90e-08!45;UBERON:0003129!1.14e-07!11;UBERON:0000165!9.59e-07!28;UBERON:0000930!9.59e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0001828;6.04e-15;8!UBERON:0000165;2.84e-11;28!UBERON:0003729;2.04e-09;13!UBERON:0001758;2.45e-09;6!UBERON:0003672;2.45e-09;6!UBERON:0002037;2.78e-09;6!UBERON:0003129;3.98e-08;7!UBERON:0001444;7.72e-08;48!UBERON:0007811;1.26e-07;52!UBERON:0001954;1.87e-07;2!UBERON:0003566;1.87e-07;2!UBERON:0003022;1.87e-07;2!UBERON:0001777;1.87e-07;2!UBERON:0002421;1.87e-07;2!UBERON:0002600;1.87e-07;2!UBERON:0000033;5.21e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,6.04e-15,8;UBERON:0000165,7.13e-11,29;UBERON:0000930,7.13e-11,29;UBERON:0003729,2.04e-09,13;UBERON:0002037,2.35e-09,6;UBERON:0006215,2.35e-09,6;UBERON:0001758,2.56e-09,6;UBERON:0003672,2.56e-09,6;UBERON:0003102,3.18e-09,99;UBERON:0001444,6.06e-09,49;UBERON:0003129,4.12e-08,7;UBERON:0000033,8.87e-08,56;UBERON:0003566,1.54e-07,2;UBERON:0001777,1.54e-07,2;UBERON:0001954,1.64e-07,2;UBERON:0003022,1.64e-07,2;UBERON:0002421,1.64e-07,2;UBERON:0002600,1.64e-07,2;UBERON:0000153,5.48e-07,62;UBERON:0007811,5.48e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423704220986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,1.1409436430889,0.896692083310806,0.117434498643765,1.29498355494505,0.702254033511242,9.1869377064702,3.31652656741774,6.19954687054593,0,0,0,0,1.17835279767846,0.500474079487857,11.9137569658199,0.438977620880838,0.919463387397059,0,0,0,0,0,0,0,0.515281080091258,0.930584281657949,0,0,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62904152655162,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.22001485746285,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14114786556594,0.315404830067869,0.234282829985426,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,2.48831670129446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20201187738654,1.77328571372128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:241577012..241577023,+ | |||
}} |
Revision as of 01:01, 11 January 2014
Short description: | p@chr1:241577012..241577023, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:241577012..241577023, + |
Coexpression cluster: | C1853_Fibroblast_cerebellum_Olfactory_basal_mesodermal_Keratocytes_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 1.63e-23 | 5 |
fibroblast | 9.89e-10 | 76 |
fibroblast of periodontium | 2.56e-09 | 6 |
fibroblast of dermis | 4.03e-09 | 6 |
keratocyte | 1.54e-07 | 2 |
migratory cranial neural crest cell | 1.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingiva | 6.04e-15 | 8 |
mouth | 7.13e-11 | 29 |
stomodeum | 7.13e-11 | 29 |
mouth mucosa | 2.04e-09 | 13 |
cerebellum | 2.35e-09 | 6 |
rhombic lip | 2.35e-09 | 6 |
periodontium | 2.56e-09 | 6 |
dentition | 2.56e-09 | 6 |
surface structure | 3.18e-09 | 99 |
subdivision of head | 6.06e-09 | 49 |
skull | 4.12e-08 | 7 |
head | 8.87e-08 | 56 |
head connective tissue | 1.54e-07 | 2 |
substantia propria of cornea | 1.54e-07 | 2 |
Ammon's horn | 1.64e-07 | 2 |
lobe parts of cerebral cortex | 1.64e-07 | 2 |
hippocampal formation | 1.64e-07 | 2 |
limbic lobe | 1.64e-07 | 2 |
anterior region of body | 5.48e-07 | 62 |
craniocervical region | 5.48e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 5.85e-14 | 1 |
skin carcinoma | 1.28e-07 | 2 |
skin cancer | 1.28e-07 | 2 |
integumentary system cancer | 1.28e-07 | 2 |