FFCP PHASE1:Hg19::chr1:228270784..228270847,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=652 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000477451,ENST00000478336_5end | |||
|description=CAGE_peak_2_at_ARF1_5end | |||
|id=chr1:228270784..228270847,+ | |||
|ontology_enrichment_celltype=CL:0000222!9.03e-28!119;CL:0000115!1.40e-20!35;CL:0002371!3.55e-20!591;CL:0000048!7.10e-20!430;CL:0000723!1.62e-18!436;CL:0002139!1.46e-16!24;CL:0000034!1.89e-16!444;CL:0000144!3.43e-16!625;CL:0000055!8.83e-16!180;CL:0000192!1.66e-15!42;CL:0000514!1.66e-15!42;CL:0000680!2.95e-15!57;CL:0000056!2.95e-15!57;CL:0000355!2.95e-15!57;CL:0000359!6.48e-15!32;CL:0002078!8.00e-15!44;CL:0000213!1.92e-14!57;CL:0000215!1.92e-14!57;CL:0000187!3.52e-14!54;CL:0000183!5.30e-14!59;CL:0000071!1.01e-12!18;CL:0002546!1.01e-12!18;CL:0000057!5.79e-11!75;CL:0000393!7.67e-10!60;CL:0000211!7.67e-10!60;CL:0002320!2.74e-08!365;CL:0000548!3.03e-08!679;CL:0000004!3.03e-08!679;CL:0000255!3.03e-08!679;CL:0000134!6.40e-08!358;CL:0000012!8.83e-08!682;CL:1000413!2.00e-07!9;CL:0002494!6.66e-07!16;CL:0000220!6.75e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.11e-18;36!CL:0002139;7.11e-17;24!CL:0000359;3.06e-14;32!CL:0000071;5.92e-13;18!CL:0000192;2.06e-11;43!CL:0002078;9.55e-11;45!CL:0000213;4.07e-09;58!CL:0000215;4.07e-09;58!CL:0000187;7.89e-08;55!CL:1000413;1.53e-07;9!CL:0002494;5.24e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.26e-28,121;CL:0000048,1.02e-21,427;CL:0000115,1.71e-21,36;CL:0000723,3.38e-20,433;CL:0000034,6.53e-18,441;CL:0002139,8.87e-17,24;CL:0002078,1.13e-15,45;CL:0000192,1.23e-15,43;CL:0000514,1.23e-15,43;CL:0000680,1.94e-15,58;CL:0000056,1.94e-15,58;CL:0000355,1.94e-15,58;CL:0000213,3.27e-15,58;CL:0000215,3.27e-15,58;CL:0000359,4.14e-15,32;CL:0000187,2.39e-14,55;CL:0000071,6.95e-13,18;CL:0002546,6.95e-13,18;CL:0000057,1.43e-11,76;CL:0000393,4.24e-10,61;CL:0000211,4.24e-10,61;CL:0002320,3.27e-09,361;CL:0000134,8.06e-09,354;CL:0002194,8.94e-08,59;CL:0000576,8.94e-08,59;CL:0000040,8.94e-08,59;CL:0000559,8.94e-08,59;CL:0000839,1.07e-07,66;CL:1000413,1.64e-07,9;CL:0000557,1.79e-07,67;CL:0002009,4.69e-07,61;CL:0002494,5.57e-07,16;CL:0002321,6.66e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;5.92e-13;18!CL:0000514;2.06e-11;43!CL:0000222;1.30e-08;121!CL:0000355;2.27e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!5.73e-33!69;UBERON:0002049!6.85e-33!79;UBERON:0007798!6.85e-33!79;UBERON:0004535!4.38e-31!110;UBERON:0001009!7.67e-31!113;UBERON:0004872!3.13e-30!84;UBERON:0003081!7.18e-30!216;UBERON:0001981!1.97e-28!60;UBERON:0007500!1.97e-28!60;UBERON:0004537!1.97e-28!60;UBERON:0006965!1.97e-28!60;UBERON:0001637!5.31e-22!42;UBERON:0003509!5.31e-22!42;UBERON:0004572!5.31e-22!42;UBERON:0003914!4.11e-19!118;UBERON:0000926!1.43e-18!448;UBERON:0004120!1.43e-18!448;UBERON:0006603!1.43e-18!448;UBERON:0002204!1.10e-17!167;UBERON:0004573!2.72e-17!33;UBERON:0004571!2.72e-17!33;UBERON:0004290!5.57e-15!70;UBERON:0000914!1.58e-14!83;UBERON:0002329!1.58e-14!83;UBERON:0003077!1.58e-14!83;UBERON:0003059!1.58e-14!83;UBERON:0007282!1.58e-14!83;UBERON:0009618!1.58e-14!83;UBERON:0007285!1.58e-14!83;UBERON:0001134!1.91e-13!61;UBERON:0002036!1.91e-13!61;UBERON:0003082!1.91e-13!61;UBERON:0001986!1.01e-12!18;UBERON:0004638!1.01e-12!18;UBERON:0004852!1.01e-12!18;UBERON:0002385!1.30e-12!63;UBERON:0001015!1.30e-12!63;UBERON:0000383!1.30e-12!63;UBERON:0000486!5.21e-12!82;UBERON:0000490!2.29e-11!138;UBERON:0000947!9.74e-11!21;UBERON:0010191!9.74e-11!21;UBERON:0000487!9.48e-10!22;UBERON:0005256!1.82e-09!143;UBERON:0000467!3.22e-09!625;UBERON:0000480!3.23e-09!626;UBERON:0000468!6.31e-09!659;UBERON:0006914!7.93e-09!25;UBERON:0002405!2.74e-08!115;UBERON:0002193!3.28e-08!112;UBERON:0002384!1.14e-07!375;UBERON:0003915!2.00e-07!9;UBERON:0004700!2.00e-07!9;UBERON:0001917!2.00e-07!9;UBERON:0002371!2.54e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;2.75e-16;65!UBERON:0007500;2.76e-16;56!UBERON:0001981;2.76e-16;56!UBERON:0004537;2.76e-16;56!UBERON:0001637;2.79e-16;42!UBERON:0003509;2.79e-16;42!UBERON:0004572;2.79e-16;42!UBERON:0004573;4.53e-16;33!UBERON:0004571;4.53e-16;33!UBERON:0002049;1.31e-13;75!UBERON:0007798;1.31e-13;75!UBERON:0004638;5.92e-13;18!UBERON:0001986;5.92e-13;18!UBERON:0004852;5.92e-13;18!UBERON:0000947;6.98e-11;21!UBERON:0010191;6.98e-11;21!UBERON:0000487;6.08e-10;22!UBERON:0003914;1.21e-09;74!UBERON:0004535;4.20e-09;109!UBERON:0006914;4.43e-09;25!UBERON:0001009;4.71e-09;112!UBERON:0003915;1.53e-07;9!UBERON:0004700;1.53e-07;9!UBERON:0001917;1.53e-07;9 | |||
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| |||
|short_description=p2@ARF1 | |||
}} |
Revision as of 00:32, 11 January 2014
Short description: | p2@ARF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000477451, ENST00000478336_5end |
EntrezGene: | ARF1 |
HGNC: | 652 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data