FFCP PHASE1:Hg19::chr1:227505967..227506013,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8476 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1737 | |||
|TSSclassifier=strong | |||
|UniProt=E9PEF7,Q5VT25 | |||
|association_with_transcript=-141bp_to_ENST00000334218,ENST00000366762,ENST00000366764,ENST00000366766,NM_003607,NM_014826,uc001hqr.2,uc001hqs.2,uc009xes.2,uc010pvs.1_5end | |||
|description=CAGE_peak_3_at_CDC42BPA_5end | |||
|id=chr1:227505967..227506013,- | |||
|ontology_enrichment_celltype=CL:0002139!4.96e-10!24;CL:0000071!3.38e-08!18;CL:0002546!3.38e-08!18;CL:0000213!1.61e-07!57;CL:0000215!1.61e-07!57;CL:0000115!4.33e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.87e-10;24!CL:0000071;1.53e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.50e-10,24;CL:0000071,1.98e-08,18;CL:0002546,1.98e-08,18;CL:0000213,1.55e-07,58;CL:0000215,1.55e-07,58;CL:0000115,4.08e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.53e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!3.39e-17!241;UBERON:0000477!7.88e-16!286;UBERON:0007023!1.06e-14!115;UBERON:0000025!1.60e-13!194;UBERON:0000955!1.79e-13!69;UBERON:0006238!1.79e-13!69;UBERON:0001017!2.01e-12!82;UBERON:0000475!3.59e-12!365;UBERON:0000073!9.42e-12!94;UBERON:0001016!9.42e-12!94;UBERON:0000468!9.73e-12!659;UBERON:0001049!1.41e-11!57;UBERON:0005068!1.41e-11!57;UBERON:0006241!1.41e-11!57;UBERON:0007135!1.41e-11!57;UBERON:0002616!2.77e-11!59;UBERON:0005743!2.84e-11!86;UBERON:0000119!6.23e-11!312;UBERON:0000483!9.27e-11!309;UBERON:0000033!2.10e-10!123;UBERON:0003080!7.98e-10!42;UBERON:0000924!1.25e-09!173;UBERON:0006601!1.25e-09!173;UBERON:0004121!1.86e-09!169;UBERON:0000153!1.98e-09!129;UBERON:0007811!1.98e-09!129;UBERON:0001950!2.05e-09!20;UBERON:0002780!2.36e-09!41;UBERON:0001890!2.36e-09!41;UBERON:0006240!2.36e-09!41;UBERON:0000467!2.79e-09!625;UBERON:0000481!2.99e-09!347;UBERON:0000480!5.03e-09!626;UBERON:0002619!6.83e-09!22;UBERON:0002346!1.42e-08!90;UBERON:0003075!1.84e-08!86;UBERON:0007284!1.84e-08!86;UBERON:0001869!1.89e-08!32;UBERON:0002020!2.30e-08!34;UBERON:0003528!2.30e-08!34;UBERON:0001893!2.77e-08!34;UBERON:0001986!3.38e-08!18;UBERON:0004638!3.38e-08!18;UBERON:0004852!3.38e-08!18;UBERON:0002791!6.33e-08!33;UBERON:0000956!9.04e-08!25;UBERON:0000203!9.04e-08!25;UBERON:0000487!2.99e-07!22;UBERON:0006914!3.35e-07!25;UBERON:0004872!3.36e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.41e-10;20!UBERON:0002619;4.24e-09;22!UBERON:0004638;1.53e-08;18!UBERON:0001986;1.53e-08;18!UBERON:0004852;1.53e-08;18!UBERON:0000956;4.09e-08;25!UBERON:0000203;4.09e-08;25!UBERON:0001869;7.74e-08;32!UBERON:0000487;1.20e-07;22!UBERON:0006914;1.72e-07;25!UBERON:0001893;2.10e-07;34!UBERON:0002780;2.64e-07;41!UBERON:0001890;2.64e-07;41!UBERON:0003528;2.95e-07;34!UBERON:0002020;2.95e-07;34!UBERON:0002791;3.66e-07;32!UBERON:0001017;9.32e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,9.92e-16,240;UBERON:0007023,5.04e-15,114;UBERON:0000955,4.67e-13,68;UBERON:0006238,4.67e-13,68;UBERON:0000025,3.81e-12,192;UBERON:0001016,3.89e-12,89;UBERON:0001017,1.16e-11,81;UBERON:0001049,4.29e-11,56;UBERON:0005068,4.29e-11,56;UBERON:0006241,4.29e-11,56;UBERON:0007135,4.29e-11,56;UBERON:0000073,2.92e-10,53;UBERON:0002616,2.92e-10,53;UBERON:0001950,1.09e-09,20;UBERON:0002780,2.12e-09,41;UBERON:0001890,2.12e-09,41;UBERON:0003080,2.12e-09,41;UBERON:0006240,2.12e-09,41;UBERON:0002619,3.78e-09,22;UBERON:0010314,6.05e-09,132;UBERON:0000119,6.97e-09,309;UBERON:0011216,9.08e-09,223;UBERON:0000483,1.01e-08,306;UBERON:0004121,1.32e-08,171;UBERON:0000924,1.32e-08,171;UBERON:0006601,1.32e-08,171;UBERON:0001869,1.88e-08,32;UBERON:0004638,1.98e-08,18;UBERON:0001986,1.98e-08,18;UBERON:0004852,1.98e-08,18;UBERON:0003528,2.25e-08,34;UBERON:0002020,2.25e-08,34;UBERON:0001893,2.73e-08,34;UBERON:0002346,3.03e-08,86;UBERON:0003075,3.29e-08,82;UBERON:0007284,3.29e-08,82;UBERON:0000956,5.47e-08,25;UBERON:0000203,5.47e-08,25;UBERON:0002791,8.84e-08,32;UBERON:0000487,1.53e-07,22;UBERON:0006914,1.75e-07,25 | |||
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| |||
|short_description=p3@CDC42BPA | |||
}} |
Revision as of 00:32, 11 January 2014
Short description: | p3@CDC42BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDC42BPA_5end |
Coexpression cluster: | NA |
Association with transcript: | -141bp_to_ENST00000334218, ENST00000366762, ENST00000366764, ENST00000366766, NM_003607, NM_014826, uc001hqr.2, uc001hqs.2, uc009xes.2, uc010pvs.1_5end |
EntrezGene: | CDC42BPA |
HGNC: | 1737 |
UniProt: | E9PEF7Q5VT25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.50e-10 | 24 |
blood vessel endothelial cell | 1.98e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.98e-08 | 18 |
lining cell | 1.55e-07 | 58 |
barrier cell | 1.55e-07 | 58 |
endothelial cell | 4.08e-07 | 36 |