FFCP PHASE1:Hg19::chr1:211665453..211665518,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=343035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19689 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-80bp_to_ENST00000484910_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_RD3_5end | |||
|id=chr1:211665453..211665518,- | |||
|ontology_enrichment_celltype=CL:0000242!3.00e-11!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.65e-20;3!UBERON:0006601;1.56e-09;82 | |||
|ontology_enrichment_disease=DOID:169!7.88e-08!6;DOID:3095!2.29e-07!22;DOID:2994!2.29e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!6.50e-22!4;UBERON:0010133!6.50e-22!4;UBERON:0003075!6.04e-19!86;UBERON:0007284!6.04e-19!86;UBERON:0000073!1.77e-18!94;UBERON:0001016!1.77e-18!94;UBERON:0002346!6.50e-18!90;UBERON:0003056!1.34e-17!61;UBERON:0005743!6.30e-15!86;UBERON:0001049!3.00e-14!57;UBERON:0005068!3.00e-14!57;UBERON:0006241!3.00e-14!57;UBERON:0007135!3.00e-14!57;UBERON:0004121!3.04e-14!169;UBERON:0001017!6.78e-14!82;UBERON:0000924!8.65e-14!173;UBERON:0006601!8.65e-14!173;UBERON:0000955!4.75e-13!69;UBERON:0006238!4.75e-13!69;UBERON:0002780!1.10e-12!41;UBERON:0001890!1.10e-12!41;UBERON:0006240!1.10e-12!41;UBERON:0001894!1.43e-12!7;UBERON:0006222!1.43e-12!7;UBERON:0003080!2.43e-12!42;UBERON:0001905!5.07e-12!2;UBERON:0002757!5.07e-12!2;UBERON:0010134!5.07e-12!2;UBERON:0002784!5.07e-12!2;UBERON:0005408!5.07e-12!2;UBERON:0001899!5.07e-12!2;UBERON:0000369!5.22e-12!4;UBERON:0002435!5.22e-12!4;UBERON:0000204!5.22e-12!4;UBERON:0010082!5.22e-12!4;UBERON:0000033!7.98e-12!123;UBERON:0002616!1.06e-11!59;UBERON:0000007!1.18e-11!2;UBERON:0000153!4.42e-11!129;UBERON:0007811!4.42e-11!129;UBERON:0000013!2.64e-09!5;UBERON:0002410!2.64e-09!5;UBERON:0000970!9.85e-09!20;UBERON:0002104!2.75e-08!21;UBERON:0005383!8.06e-08!3;UBERON:0005382!8.06e-08!3;UBERON:0001896!1.21e-07!3;UBERON:0005290!1.21e-07!3;UBERON:0010096!1.21e-07!3;UBERON:0000020!1.63e-07!23;UBERON:0001032!3.57e-07!24;UBERON:0004456!3.57e-07!24;UBERON:0009663!4.73e-07!7;UBERON:0007023!8.75e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.91e-57;4!UBERON:0010133;2.91e-57;4!UBERON:0001894;5.93e-33;7!UBERON:0001905;4.49e-30;2!UBERON:0002757;4.49e-30;2!UBERON:0010134;4.49e-30;2!UBERON:0005408;4.49e-30;2!UBERON:0001899;4.49e-30;2!UBERON:0000007;4.55e-29;2!UBERON:0002784;1.44e-15;4!UBERON:0000966;1.69e-12;5!UBERON:0005388;1.69e-12;5!UBERON:0001802;1.69e-12;5!UBERON:0002360;2.77e-08;2!UBERON:0000094;2.77e-08;2!UBERON:0010743;2.77e-08;2!UBERON:0001017;5.03e-08;75!UBERON:0000955;9.69e-08;68!UBERON:0000970;4.52e-07;20!UBERON:0002104;9.31e-07;21!UBERON:0002780;9.72e-07;41!UBERON:0001890;9.72e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.91e-57,4;UBERON:0010133,2.91e-57,4;UBERON:0001894,5.93e-33,7;UBERON:0006222,5.93e-33,7;UBERON:0001905,4.49e-30,2;UBERON:0002757,4.49e-30,2;UBERON:0010134,4.49e-30,2;UBERON:0005408,4.49e-30,2;UBERON:0001899,4.49e-30,2;UBERON:0000007,4.55e-29,2;UBERON:0002784,1.44e-15,4;UBERON:0001017,5.70e-13,81;UBERON:0000955,2.67e-12,68;UBERON:0006238,2.67e-12,68;UBERON:0001016,1.29e-11,89;UBERON:0003056,8.65e-11,61;UBERON:0000966,1.43e-10,6;UBERON:0005388,1.43e-10,6;UBERON:0001802,1.43e-10,6;UBERON:0003075,2.89e-10,82;UBERON:0007284,2.89e-10,82;UBERON:0002346,9.25e-10,86;UBERON:0000073,3.46e-09,53;UBERON:0002616,3.46e-09,53;UBERON:0001049,1.09e-08,56;UBERON:0005068,1.09e-08,56;UBERON:0006241,1.09e-08,56;UBERON:0007135,1.09e-08,56;UBERON:0002780,1.81e-08,41;UBERON:0001890,1.81e-08,41;UBERON:0003080,1.81e-08,41;UBERON:0006240,1.81e-08,41;UBERON:0002360,2.48e-08,2;UBERON:0000094,2.48e-08,2;UBERON:0010743,2.48e-08,2;UBERON:0010371,5.89e-08,104;UBERON:0004121,4.24e-07,171;UBERON:0000924,4.24e-07,171;UBERON:0006601,4.24e-07,171;UBERON:0002368,8.02e-07,35;UBERON:0000970,9.31e-07,21;UBERON:0002104,9.31e-07,21 | |||
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|short_description=p1@RD3 | |||
}} |
Revision as of 00:04, 11 January 2014
Short description: | p1@RD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RD3_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -80bp_to_ENST00000484910_5end |
EntrezGene: | RD3 |
HGNC: | 19689 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data