FFCP PHASE1:Hg19::chr1:204257513..204257533,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:204257513..204257533,- | |||
|id=chr1:204257513..204257533,- | |||
|ontology_enrichment_celltype=CL:0000066!1.07e-14!254;CL:0000223!9.19e-10!59;CL:0002076!2.79e-08!43;CL:0002251!5.00e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.10e-13;5!CL:0000167;4.40e-08;1!CL:0000164;4.40e-08;1!CL:0000502;4.40e-08;1!CL:0000172;4.40e-08;1!CL:0000173;4.40e-08;1!CL:0002327;7.56e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.57e-08,1;CL:0000164,3.57e-08,1;CL:0000502,3.57e-08,1;CL:0000172,3.57e-08,1;CL:0000173,3.57e-08,1;CL:0002351,3.57e-08,1;CL:0002327,8.53e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.95e-08;1!UBERON:0008425;1.95e-08;1!CL:0002351;4.40e-08;1!UBERON:0004140;4.40e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.83e-15!143;DOID:305!1.49e-13!106;DOID:162!2.21e-10!235;DOID:14566!9.22e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:169;2.97e-19;6!DOID:171;1.27e-11;10!DOID:4430;4.40e-08;1!DOID:3095;6.47e-08;22!DOID:2994;6.47e-08;22!DOID:5409;1.12e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.59e-19,6;DOID:171,1.17e-11,10;DOID:4430,3.57e-08,1;DOID:3095,5.87e-08,22;DOID:2994,5.87e-08,22;DOID:5409,7.44e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.70e-13!169;UBERON:0000925!2.70e-13!169;UBERON:0006595!2.70e-13!169;UBERON:0001007!3.54e-11!155;UBERON:0001555!3.54e-11!155;UBERON:0007026!3.54e-11!155;UBERON:0004921!1.51e-09!129;UBERON:0004185!1.51e-09!129;UBERON:0000161!1.81e-09!35;UBERON:0001004!3.78e-09!72;UBERON:0005911!1.94e-08!82;UBERON:0000077!6.35e-08!130;UBERON:0001041!1.46e-07!98;UBERON:0005157!3.05e-07!51;UBERON:0000166!3.29e-07!21;UBERON:0001008!5.79e-07!45;UBERON:0005153!7.81e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.10e-13;5!UBERON:0002410;1.10e-13;5!UBERON:0000998;1.95e-08;1!UBERON:0006868;1.95e-08;1!UBERON:0000996;4.40e-08;1!UBERON:0002135;4.40e-08;1!UBERON:0001911;7.56e-08;4!UBERON:0000010;8.29e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.10e-13,5;UBERON:0002410,1.10e-13,5;UBERON:0000998,2.17e-08,1;UBERON:0006868,2.17e-08,1;UBERON:0002135,4.41e-08,1;UBERON:0000996,4.72e-08,1;UBERON:0000010,8.29e-08,8;UBERON:0001911,8.53e-08,4;UBERON:0005333,8.53e-08,4;UBERON:0008425,8.53e-08,4;UBERON:0005311,8.53e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0.651616610620649,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.671928512795438,0.283550194484773,0.268675568108545,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,1.08890984861323,0,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,5.33514638415572,0,0,2.50634477090067,0,0,0,0,6.18309620560377,0,0,0.166849141711909,0,0,0,0.811367035427949,0,1.4098700508785,0,0,0,0,0,0.71623345421307,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0.359473404589307,0.179021174675609,0,0.394573622547734,0,0,0,0,0,0.520855522170466,2.27395999990109,0,0.1137934482855,0.254253650292766,0,2.75794698593172,0,0,0,0,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,1.2558420511602,0.166211681900156,0,0,0,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0,0.394584402849391,0,0,0.126373159256976,0.150323419414493,0.622129148383483,0,0,0,0,0.284609546029793,0,0,0.489961987071888,0.261177619741208,0.698906672968121,0,0.0967563312890851,0.146178634172371,0,0.387956065953678,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0.171594997861965,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,1.39641200636127,0.458320848023367,0,0.998395002494955,2.14613024068285,1.56220020209311,1.47803639470798,0,0,0,0,0.0674035438541849,0.885847333632739,0,0,0,0,0,0,0.2249738915515,0,0,0.670869375198532,0.0788057072991982,0.577000469484979,0,0,0.383830394638891,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.339936274560377,0,0,0,0,1.02652102730598,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,1.40500471742064,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0.680117776536817,2.08370226891451,0,0,0,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,0.633936370075881,0,0.106691729694141,0,0,0,0.419638523158333,0,4.98788048084242,3.5582187760905,0.314531883711793,3.82233733672049,0.509197589862076,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0.183428598521679,0.231051332300676,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0.511049710558381,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0.347716544605159,0,0.414432328326074,0.17071847709395,2.07377898544228,0.860454717640555,0,0,2.11693525095465,0,0,0,0,0.196300467230486,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0.22589216407792,1.97892930141772,1.50962843566674,0,0,0,0.245148321753905,1.41405928260976,0,0,0,0,0,0,0,1.2498775702396,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,2.91406552326305,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,0.190941474834495,0,0,0.342233301085281,0.0673520530145875,0,0.332660356546013,0.488419611665847,0.533636729388577,0,0.359300808426348,0,0,0.406896178315738,1.33151354837103,0,0 | |||
|short_description=p@chr1:204257513..204257533,- | |||
}} |
Revision as of 23:36, 10 January 2014
Short description: | p@chr1:204257513..204257533, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:204257513..204257533, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.57e-08 | 1 |
enteroendocrine cell | 3.57e-08 | 1 |
type D enteroendocrine cell | 3.57e-08 | 1 |
somatostatin secreting cell | 3.57e-08 | 1 |
pancreatic D cell | 3.57e-08 | 1 |
progenitor cell of endocrine pancreas | 3.57e-08 | 1 |
mammary gland epithelial cell | 8.53e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.10e-13 | 5 |
autonomic nervous system | 1.10e-13 | 5 |
seminal vesicle | 2.17e-08 | 1 |
seminal fluid secreting gland | 2.17e-08 | 1 |
mitral valve | 4.41e-08 | 1 |
vagina | 4.72e-08 | 1 |
peripheral nervous system | 8.29e-08 | 8 |
mammary gland | 8.53e-08 | 4 |
mammary bud | 8.53e-08 | 4 |
mammary ridge | 8.53e-08 | 4 |
mammary placode | 8.53e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.59e-19 | 6 |
neuroectodermal tumor | 1.17e-11 | 10 |
somatostatinoma | 3.57e-08 | 1 |
germ cell and embryonal cancer | 5.87e-08 | 22 |
germ cell cancer | 5.87e-08 | 22 |
lung small cell carcinoma | 7.44e-08 | 4 |