FFCP PHASE1:Hg19::chr1:202594169..202594182,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1331 | |||
|description=CAGE_peak_at_chr1:202594169..202594182,- | |||
|id=chr1:202594169..202594182,- | |||
|ontology_enrichment_celltype=CL:0002127!1.35e-07!1;CL:0000914!1.35e-07!1;CL:0000911!1.35e-07!1;CL:0000814!1.35e-07!1;CL:0002042!1.35e-07!1;CL:0002039!1.35e-07!1;CL:0002040!1.35e-07!1;CL:0002041!1.35e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.74e-88;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.11e-45!57;UBERON:0005068!2.11e-45!57;UBERON:0006241!2.11e-45!57;UBERON:0007135!2.11e-45!57;UBERON:0002616!1.88e-39!59;UBERON:0001017!2.64e-33!82;UBERON:0000955!1.01e-32!69;UBERON:0006238!1.01e-32!69;UBERON:0005743!1.35e-31!86;UBERON:0000073!4.15e-31!94;UBERON:0001016!4.15e-31!94;UBERON:0003075!6.94e-29!86;UBERON:0007284!6.94e-29!86;UBERON:0002346!1.97e-27!90;UBERON:0003076!3.76e-27!15;UBERON:0003057!3.76e-27!15;UBERON:0004733!2.56e-26!12;UBERON:0002028!2.56e-26!12;UBERON:0007277!2.56e-26!12;UBERON:0004732!3.12e-24!13;UBERON:0002780!1.70e-23!41;UBERON:0001890!1.70e-23!41;UBERON:0006240!1.70e-23!41;UBERON:0003080!6.86e-23!42;UBERON:0007023!7.85e-21!115;UBERON:0000988!1.44e-20!3;UBERON:0002298!2.37e-20!8;UBERON:0002020!3.03e-20!34;UBERON:0003528!3.03e-20!34;UBERON:0002680!1.32e-18!9;UBERON:0001895!1.32e-18!9;UBERON:0010092!1.32e-18!9;UBERON:0002308!5.96e-18!9;UBERON:0000125!5.96e-18!9;UBERON:0001869!8.82e-18!32;UBERON:0000153!1.00e-17!129;UBERON:0007811!1.00e-17!129;UBERON:0000033!7.54e-17!123;UBERON:0001893!1.14e-16!34;UBERON:0004121!1.41e-15!169;UBERON:0000924!4.04e-15!173;UBERON:0006601!4.04e-15!173;UBERON:0003056!4.16e-15!61;UBERON:0001905!9.65e-15!2;UBERON:0002757!9.65e-15!2;UBERON:0010134!9.65e-15!2;UBERON:0002784!9.65e-15!2;UBERON:0005408!9.65e-15!2;UBERON:0001899!9.65e-15!2;UBERON:0002148!3.67e-14!2;UBERON:0009662!3.67e-14!2;UBERON:0002791!7.42e-14!33;UBERON:0000025!3.72e-13!194;UBERON:0001950!1.71e-10!20;UBERON:0000200!2.06e-10!6;UBERON:0006331!9.72e-10!3;UBERON:0004111!1.02e-09!241;UBERON:0002771!1.26e-09!3;UBERON:0002619!1.55e-09!22;UBERON:0001896!1.57e-09!3;UBERON:0005290!1.57e-09!3;UBERON:0010096!1.57e-09!3;UBERON:0001894!4.35e-09!7;UBERON:0006222!4.35e-09!7;UBERON:0009663!6.93e-09!7;UBERON:0000477!2.17e-08!286;UBERON:0000956!2.25e-08!25;UBERON:0000203!2.25e-08!25;UBERON:0007190!4.99e-08!1;UBERON:0003296!8.53e-08!4;UBERON:0010133!8.53e-08!4;UBERON:0001882!9.72e-08!1;UBERON:0005403!9.72e-08!1;UBERON:0000483!2.04e-07!309;UBERON:0000369!2.27e-07!4;UBERON:0002435!2.27e-07!4;UBERON:0000204!2.27e-07!4;UBERON:0010082!2.27e-07!4;UBERON:0000119!2.67e-07!312;UBERON:0002420!5.21e-07!9;UBERON:0007245!5.21e-07!9;UBERON:0010009!5.21e-07!9;UBERON:0010011!5.21e-07!9;UBERON:0000454!5.21e-07!9;UBERON:0000064!8.17e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.22e-44;6!UBERON:0001905;5.04e-34;2!UBERON:0002757;5.04e-34;2!UBERON:0010134;5.04e-34;2!UBERON:0005408;5.04e-34;2!UBERON:0001899;5.04e-34;2!UBERON:0002680;3.09e-30;9!UBERON:0001895;3.09e-30;9!UBERON:0004733;5.14e-23;12!UBERON:0002028;5.14e-23;12!UBERON:0004732;2.40e-21;13!UBERON:0003296;8.69e-18;4!UBERON:0010133;8.69e-18;4!UBERON:0002784;8.69e-18;4!UBERON:0001894;8.99e-11;7!UBERON:0000073;3.69e-08;53!UBERON:0002616;3.69e-08;53!UBERON:0000955;1.68e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.22e-44,6;UBERON:0006215,1.22e-44,6;UBERON:0001905,5.04e-34,2;UBERON:0002757,5.04e-34,2;UBERON:0010134,5.04e-34,2;UBERON:0005408,5.04e-34,2;UBERON:0001899,5.04e-34,2;UBERON:0002680,3.09e-30,9;UBERON:0001895,3.09e-30,9;UBERON:0010092,3.09e-30,9;UBERON:0004733,5.14e-23,12;UBERON:0002028,5.14e-23,12;UBERON:0007277,5.14e-23,12;UBERON:0004732,2.40e-21,13;UBERON:0003076,1.13e-18,15;UBERON:0003057,1.13e-18,15;UBERON:0003296,8.69e-18,4;UBERON:0010133,8.69e-18,4;UBERON:0002784,8.69e-18,4;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0001894,8.99e-11,7;UBERON:0006222,8.99e-11,7;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.241192877250816,0,5.52896299656123,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,4.70797211106354,0,0,0,0,0,0.475788130837822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:202594169..202594182,- | |||
}} |
Revision as of 23:25, 10 January 2014
Short description: | p@chr1:202594169..202594182, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:202594169..202594182, - |
Coexpression cluster: | C1331_cerebellum_pineal_Neural_medulla_parietal_hippocampus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-44 | 6 |
rhombic lip | 1.22e-44 | 6 |
pineal body | 5.04e-34 | 2 |
regional part of epithalamus | 5.04e-34 | 2 |
secretory circumventricular organ | 5.04e-34 | 2 |
circumventricular organ | 5.04e-34 | 2 |
epithalamus | 5.04e-34 | 2 |
regional part of metencephalon | 3.09e-30 | 9 |
metencephalon | 3.09e-30 | 9 |
future metencephalon | 3.09e-30 | 9 |
segmental subdivision of hindbrain | 5.14e-23 | 12 |
hindbrain | 5.14e-23 | 12 |
presumptive hindbrain | 5.14e-23 | 12 |
segmental subdivision of nervous system | 2.40e-21 | 13 |
posterior neural tube | 1.13e-18 | 15 |
chordal neural plate | 1.13e-18 | 15 |
gland of diencephalon | 8.69e-18 | 4 |
neuroendocrine gland | 8.69e-18 | 4 |
regional part of diencephalon | 8.69e-18 | 4 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
diencephalon | 8.99e-11 | 7 |
future diencephalon | 8.99e-11 | 7 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |