FFCP PHASE1:Hg19::chr1:170633348..170633399,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |||
|TSSclassifier=strong | |||
|UniProt=P54821 | |||
|association_with_transcript=35bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | |||
|coexpression_cluster_id=C851 | |||
|description=CAGE_peak_2_at_PRRX1_5end | |||
|id=chr1:170633348..170633399,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.25e-46!180;CL:0000057!2.55e-25!75;CL:0000680!1.44e-17!57;CL:0000056!1.44e-17!57;CL:0000355!1.44e-17!57;CL:0000187!6.87e-17!54;CL:0000183!1.33e-15!59;CL:0000393!8.51e-15!60;CL:0000211!8.51e-15!60;CL:0002620!3.55e-12!23;CL:0000192!4.81e-12!42;CL:0000514!4.81e-12!42;CL:0000359!1.52e-10!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.24e-13;23!CL:0000359;9.72e-11;32!CL:0000057;1.66e-10;73!CL:0000187;3.55e-10;55!CL:0000192;1.50e-09;43!CL:0000393;5.14e-09;61!CL:0000211;5.14e-09;61!CL:0002320;1.61e-07;188!CL:0002334;9.81e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-25,76;CL:0000680,1.05e-18,58;CL:0000056,1.05e-18,58;CL:0000355,1.05e-18,58;CL:0000187,5.69e-18,55;CL:0000393,5.46e-16,61;CL:0000211,5.46e-16,61;CL:0002620,5.42e-13,23;CL:0000192,9.02e-13,43;CL:0000514,9.02e-13,43;CL:0000359,3.11e-11,32;CL:0000048,4.25e-09,427;CL:0000723,3.16e-08,433;CL:0000034,3.77e-07,441;CL:0002334,9.07e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;3.34e-10;58!CL:0000514;1.50e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.14e-28!83;UBERON:0002329!5.14e-28!83;UBERON:0003077!5.14e-28!83;UBERON:0003059!5.14e-28!83;UBERON:0007282!5.14e-28!83;UBERON:0009618!5.14e-28!83;UBERON:0007285!5.14e-28!83;UBERON:0004290!7.11e-25!70;UBERON:0001134!1.64e-19!61;UBERON:0002036!1.64e-19!61;UBERON:0003082!1.64e-19!61;UBERON:0000486!1.67e-19!82;UBERON:0002385!2.82e-19!63;UBERON:0001015!2.82e-19!63;UBERON:0000383!2.82e-19!63;UBERON:0000475!8.25e-18!365;UBERON:0003102!1.12e-13!95;UBERON:0000481!4.20e-12!347;UBERON:0000468!4.41e-11!659;UBERON:0004872!5.53e-11!84;UBERON:0005256!5.96e-11!143;UBERON:0002199!6.12e-11!45;UBERON:0002416!6.12e-11!45;UBERON:0002097!1.63e-09!40;UBERON:0000479!2.40e-09!787;UBERON:0007100!4.29e-09!27;UBERON:0000119!5.30e-09!312;UBERON:0000948!1.80e-08!24;UBERON:0005498!1.80e-08!24;UBERON:0004140!1.80e-08!24;UBERON:0009881!1.80e-08!24;UBERON:0004141!1.80e-08!24;UBERON:0003084!1.80e-08!24;UBERON:0007005!1.80e-08!24;UBERON:0004139!1.80e-08!24;UBERON:0004291!1.80e-08!24;UBERON:0000483!2.53e-08!309;UBERON:0007023!3.64e-08!115;UBERON:0001637!3.68e-08!42;UBERON:0003509!3.68e-08!42;UBERON:0004572!3.68e-08!42;UBERON:0004121!1.68e-07!169;UBERON:0004573!1.87e-07!33;UBERON:0004571!1.87e-07!33;UBERON:0000467!2.25e-07!625;UBERON:0000924!2.35e-07!173;UBERON:0006601!2.35e-07!173;UBERON:0000480!3.18e-07!626;UBERON:0001981!4.02e-07!60;UBERON:0007500!4.02e-07!60;UBERON:0004537!4.02e-07!60;UBERON:0006965!4.02e-07!60;UBERON:0002067!4.69e-07!9;UBERON:0004016!4.69e-07!9;UBERON:0010083!4.69e-07!9;UBERON:0000153!5.75e-07!129;UBERON:0007811!5.75e-07!129;UBERON:0000033!6.41e-07!123;UBERON:0001013!8.34e-07!14;UBERON:0002100!8.58e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.36e-12;31!UBERON:0001015;3.36e-12;31!UBERON:0000383;3.36e-12;31!UBERON:0002204;1.50e-09;70!UBERON:0007100;7.63e-09;25!UBERON:0002384;9.86e-09;198!UBERON:0001134;1.11e-08;16!UBERON:0002036;1.11e-08;16!UBERON:0000948;3.60e-08;22!UBERON:0002097;6.77e-08;41!UBERON:0002199;8.38e-08;46!UBERON:0002416;8.38e-08;46!UBERON:0002067;1.81e-07;9!UBERON:0003102;2.59e-07;50!UBERON:0001013;3.12e-07;14!UBERON:0004573;4.37e-07;33!UBERON:0004571;4.37e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.77e-27,73;UBERON:0002329,1.50e-26,71;UBERON:0003059,1.50e-26,71;UBERON:0007282,1.50e-26,71;UBERON:0004290,1.50e-26,71;UBERON:0009618,1.50e-26,71;UBERON:0003077,1.53e-26,72;UBERON:0007285,1.53e-26,72;UBERON:0007503,1.81e-21,78;UBERON:0000486,4.06e-21,83;UBERON:0001134,8.56e-21,62;UBERON:0002036,8.56e-21,62;UBERON:0003082,8.56e-21,62;UBERON:0002385,3.97e-20,64;UBERON:0001015,3.97e-20,64;UBERON:0000383,3.97e-20,64;UBERON:0003102,4.50e-14,99;UBERON:0010314,5.53e-13,132;UBERON:0000479,2.34e-12,773;UBERON:0002199,1.00e-11,46;UBERON:0002416,1.00e-11,46;UBERON:0005256,2.28e-11,122;UBERON:0003104,8.49e-11,160;UBERON:0009142,8.49e-11,160;UBERON:0002097,3.40e-10,41;UBERON:0004872,7.82e-10,83;UBERON:0007100,1.13e-09,27;UBERON:0000948,5.28e-09,24;UBERON:0005498,5.28e-09,24;UBERON:0004140,5.28e-09,24;UBERON:0009881,5.28e-09,24;UBERON:0004141,5.28e-09,24;UBERON:0003084,5.28e-09,24;UBERON:0007005,5.28e-09,24;UBERON:0004139,5.28e-09,24;UBERON:0004291,5.28e-09,24;UBERON:0001637,2.78e-08,42;UBERON:0003509,2.78e-08,42;UBERON:0004572,2.78e-08,42;UBERON:0000119,5.36e-08,309;UBERON:0004573,8.54e-08,33;UBERON:0004571,8.54e-08,33;UBERON:0002067,1.76e-07,9;UBERON:0004016,1.76e-07,9;UBERON:0010083,1.76e-07,9;UBERON:0000483,2.45e-07,306;UBERON:0001013,3.27e-07,14;UBERON:0007023,3.95e-07,114;UBERON:0000926,5.74e-07,315;UBERON:0004120,5.74e-07,315;UBERON:0006603,5.74e-07,315;UBERON:0004121,6.22e-07,171;UBERON:0000924,6.22e-07,171;UBERON:0006601,6.22e-07,171;UBERON:0000490,9.11e-07,148 | |||
|phase1_expression=17.8044811685145,17.9844440068426,5.49722175974288,24.0175916047513,2.23480547213644,13.0850778615055,2.53299878168311,10.1075179748293,10.4474251279935,0.245733936501509,0,0,0,21.9066444739283,11.5989081504771,32.2716070296852,38.5724497935345,44.5489155136298,27.8121695310589,1.96993692922861,7.14002419354885,0,9.15955158819382,13.9611913574342,8.53689949244659,4.50839093912912,6.32174538764582,5.11620078538915,0,0,2.63187409637329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9426179682566,8.71911117614727,8.69465420536006,11.9274920286907,35.0936537445123,19.2645870217896,40.5595832996061,9.73269740605272,0,0.221729397462564,0.966182642624386,5.04269440666194,0,0,0,0,0,0,0,0,0.596287222100115,3.4409383804245,0,0,5.45349267072878,0,0.417989933073621,0,0.35576626268671,0,0,0.760272105718513,0.732186172644509,0,0,0,0,0.112611480483322,0,3.79706263827252,0.732806975721629,0,0,0,15.9031024542502,47.4864418742174,5.69359477496841,21.512746556161,36.5308433664308,22.4271040056923,3.20246987189115,4.44001587150888,21.7847724779836,9.56445771694785,9.80771418680752,2.27036141467397,3.45705554687999,23.6664646152135,40.892970064772,31.9464220064892,43.6390147211259,34.4083081026231,58.9217517499999,57.8657323613264,44.0973009910569,65.3478568098606,40.8136835644274,97.4162342971284,91.7360307623446,2.73048408581408,0.718618141816238,76.5929318491001,75.8218230424103,82.8421705297707,98.7699646981885,79.9933147035441,109.523544942909,9.07457465280168,24.0382111823075,35.8776413215193,20.9812582147966,10.2030972668697,26.072289897325,12.6243864622358,21.9617890471276,25.6540025006725,60.8981282257491,13.126556260694,17.8576803366061,98.6040946594753,11.7153165530483,24.3820077710889,30.8600278005087,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.518305275076852,0.252320850875628,0,29.725411142665,48.8863113026593,29.0083334840209,43.1862173069741,22.3782639317572,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,1.2347220339942,0,0,0,0,0,0,8.23525489432923,0,0,0,0,15.9646069602059,19.758760920312,1.44331342025273,1.39116485970092,6.80970426567766,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.25248486685276,0.126995788584338,0,0,5.13217338068116,0.514137463516618,0,0,20.2957262665103,14.3866822714982,38.6492766276407,3.74887975697556,14.3062578340753,24.513779824124,16.2222251116771,7.28052058379563,24.1774931806414,11.3479305618623,26.908640080626,0.285955987316295,1.62786481617433,9.05564370458846,33.5508269822547,0,7.12756685640086,0,0,0,0,0,0,25.1606098266162,22.9723871668228,69.892083469952,7.09428402671138,13.3559609657749,9.13210912523467,0,0,0,0,2.54094624222463,3.90419561572865,4.63973287666617,3.18280904135263,1.91381625495949,0,0,0,30.672872929785,19.5066503213274,7.05289061619313,67.7985008590431,43.1798152889131,30.2788636865155,34.322434592865,26.784202875767,36.3852006489576,28.9724599619014,76.3859438315752,41.6674320904249,41.0959496434032,6.85304051119592,8.92172901908225,0,0,0,0,3.32870879020994,1.5119514666484,14.3902528534891,22.7123720466332,23.2947878379451,5.76626171650654,25.0736552042685,4.98647155545183,13.3576259800492,49.3471020168498,25.0362032691509,47.7158776440231,34.270792326119,34.8631135379878,0,0,0,6.31479464905337,26.0390370249605,18.4885425092788,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,6.41125312790973,0.984043937099117,6.50756789328606,2.36994326789761,0.457847324091717,0.082509499920588,4.59412430396938,0.650060246036521,24.1025894766239,27.3578132766705,16.7912992654962,12.5873013275426,25.3619293371536,27.3921624414098,22.187554168877,29.1475065763065,28.134123264369,0,0,0,0,13.015675380324,7.24068397710472,32.0637144273876,67.4593540585634,10.1138145760234,28.7077887384774,9.82218361250776,4.72312126248571,16.747126621185,8.22586504268687,1.71567174531442,5.62975140884935,17.5454985093907,41.0482189824458,13.3441268833869,5.57604618508276,1.09814811894422,3.29874726567922,11.3222189681057,6.34041284692033,13.4802705996474,0.48763373908959,12.6731014608268,10.5650146756755,30.5759801553888,3.53513579884282,47.463408980502,21.5032483982988,3.3171948762061,5.26141062304515,8.10285747973363,26.8916848339119,2.43492452355245,11.7732929277905,18.8736053696602,17.6395963210983,5.89494246078727,2.1400263088875,28.0261240615772,13.5108886590505,18.7698088987144,25.4247026423029,18.1966054527391,0,1.34060455107157,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5741461624796,0,0,0,0,2.96964680832639,0,2.98244294329889,2.67271891179974,0.222617410045812,0,0,4.98119970627674,2.48655523978033,0,0.102268682502155,10.2160388532688,22.3948503116501,0,0,0,9.27248012987176,0,33.3410970433911,0.969332746095218,2.96857914117924,0,0,0,7.24999575434793,0,0,0,0,0,5.55599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| |||
|short_description=p2@PRRX1 | |||
}} |
Revision as of 22:13, 10 January 2014
Short description: | p2@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRRX1_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | 35bp_to_NM_006902, NM_022716, uc001ghe.2, uc001ghf.2_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-25 | 76 |
muscle precursor cell | 1.05e-18 | 58 |
myoblast | 1.05e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.05e-18 | 58 |
muscle cell | 5.69e-18 | 55 |
electrically responsive cell | 5.46e-16 | 61 |
electrically active cell | 5.46e-16 | 61 |
skin fibroblast | 5.42e-13 | 23 |
smooth muscle cell | 9.02e-13 | 43 |
smooth muscle myoblast | 9.02e-13 | 43 |
vascular associated smooth muscle cell | 3.11e-11 | 32 |
multi fate stem cell | 4.25e-09 | 427 |
somatic stem cell | 3.16e-08 | 433 |
stem cell | 3.77e-07 | 441 |
preadipocyte | 9.07e-07 | 12 |