FFCP PHASE1:Hg19::chr1:155954237..155954260,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr1:155954237..155954260,- | |||
|id=chr1:155954237..155954260,- | |||
|ontology_enrichment_celltype=CL:0000223!7.09e-12!59;CL:0000066!4.26e-11!254;CL:0002322!4.62e-11!5;CL:0002076!5.51e-10!43;CL:0002368!7.47e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.99e-26;5!CL:0000039;2.48e-12;7!CL:0000586;2.48e-12;7!CL:0002368;1.69e-09;13!CL:0002321;1.59e-08;15!CL:0000540;4.45e-08;6!CL:0000404;4.45e-08;6!CL:0000307;1.11e-07;3!CL:0000167;5.89e-07;1!CL:0000164;5.89e-07;1!CL:0000502;5.89e-07;1!CL:0000172;5.89e-07;1!CL:0000173;5.89e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.29e-26,5;CL:0000039,3.09e-12,7;CL:0000586,3.09e-12,7;CL:0000066,3.55e-10,253;CL:0002368,1.22e-09,13;CL:0000540,5.24e-08,6;CL:0000031,5.24e-08,6;CL:0000404,5.24e-08,6;CL:0000068,9.08e-08,3;CL:0000069,9.08e-08,3;CL:0000307,9.08e-08,3;CL:0000377,9.08e-08,3;CL:0000167,5.90e-07,1;CL:0000164,5.90e-07,1;CL:0000502,5.90e-07,1;CL:0000172,5.90e-07,1;CL:0000173,5.90e-07,1;CL:0002351,5.90e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.60e-13;10!UBERON:0005564;6.60e-13;10!CL:0000031;4.45e-08;6!CL:0000377;1.11e-07;3!CL:0002351;5.89e-07;1 | |||
|ontology_enrichment_disease=DOID:305!2.89e-16!106;DOID:0050687!1.16e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.31e-11;2!DOID:4430;5.89e-07;1!DOID:0050619;6.58e-07;1!DOID:1357;6.58e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.50e-11,2;DOID:305,3.16e-09,106;DOID:0050687,5.76e-07,143;DOID:4430,5.90e-07,1;DOID:0050619,6.59e-07,1;DOID:1357,6.59e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000466!1.60e-12!126;UBERON:0000464!1.93e-12!104;UBERON:0000065!3.52e-12!53;UBERON:0001041!6.58e-11!98;UBERON:0001004!1.94e-10!72;UBERON:0004921!1.43e-09!129;UBERON:0004185!1.43e-09!129;UBERON:0004119!3.04e-09!169;UBERON:0000925!3.04e-09!169;UBERON:0006595!3.04e-09!169;UBERON:0000473!1.42e-08!8;UBERON:0000077!3.60e-08!130;UBERON:0001007!3.70e-08!155;UBERON:0001555!3.70e-08!155;UBERON:0007026!3.70e-08!155;UBERON:0005177!3.75e-08!107;UBERON:0003135!4.64e-08!11;UBERON:0005178!2.12e-07!34;UBERON:0002224!2.12e-07!34;UBERON:0000072!2.82e-07!46;UBERON:0005181!4.26e-07!35;UBERON:0006562!8.65e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.37e-11;8!UBERON:0003135;7.10e-08;11!UBERON:0001764;6.58e-07;1!UBERON:0001825;6.58e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.01e-10,8;UBERON:0003135,8.13e-08,11;UBERON:0001764,6.59e-07,1;UBERON:0001825,6.59e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97671160035017,2.78312513475119,4.76395165765025,3.00617059544574,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644566922551274,0,0,0,1.35359883872224,0.462092022626489,0,0,0.211103257785751,0,0,0,0,0,0,0.509752546090077,2.49322802678617,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81813406897076,0.384380134730212,0.510450849978337,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92444225451024,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,1.04171104434093,0,0,0.227586896570999,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,1.05226393590145,0.207376382794494,0,0,0,0,21.0611064062047,0,0.347119476670262,0.0979923974143777,0,0.873633341210151,0,0,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0.864542502924636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,20.9692709149417,0,0.0824158583811665,0,0.0984274815147488,0,0,0,1.12527203925513,2.06309154895851,1.24632101408756,0,0,0,0,0.630445658393585,3.09482069996489,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,4.46838880439127,0,0,0,0,25.5998176887882,0,0,0,0,0,0,0.415045904808692,0.124980407962107,0,0,0,0.936669811613763,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,1.39879507719444,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,1.21393120847326,0.455324382702595,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.68732060563215,0,0,0,6.28161495137555,2.07260472469858,0,0,0,0.485710993059139,1.40363678077263,0,0,20.8950251772076,0.219881033490858,91.9363717321042,0.231522474323834,0,45.1504604507062,0,63.3969911703374,0,0,0,0,0,0,0,3.57107877211315,0,0.0802413666891683,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0,0,4.38551967890521,14.1625224790747,12.6814961358086,1.0028301571695,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0.193766729508018,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:155954237..155954260,- | |||
}} |
Revision as of 21:21, 10 January 2014
Short description: | p@chr1:155954237..155954260, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:155954237..155954260, - |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.29e-26 | 5 |
germ line cell | 3.09e-12 | 7 |
germ cell | 3.09e-12 | 7 |
epithelial cell | 3.55e-10 | 253 |
respiratory epithelial cell | 1.22e-09 | 13 |
neuron | 5.24e-08 | 6 |
neuroblast | 5.24e-08 | 6 |
electrically signaling cell | 5.24e-08 | 6 |
duct epithelial cell | 9.08e-08 | 3 |
branched duct epithelial cell | 9.08e-08 | 3 |
tracheal epithelial cell | 9.08e-08 | 3 |
tracheoblast | 9.08e-08 | 3 |
peptide hormone secreting cell | 5.90e-07 | 1 |
enteroendocrine cell | 5.90e-07 | 1 |
type D enteroendocrine cell | 5.90e-07 | 1 |
somatostatin secreting cell | 5.90e-07 | 1 |
pancreatic D cell | 5.90e-07 | 1 |
progenitor cell of endocrine pancreas | 5.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.01e-10 | 8 |
male reproductive organ | 8.13e-08 | 11 |
maxillary sinus | 6.59e-07 | 1 |
paranasal sinus | 6.59e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.50e-11 | 2 |
carcinoma | 3.16e-09 | 106 |
cell type cancer | 5.76e-07 | 143 |
somatostatinoma | 5.90e-07 | 1 |
paranasal sinus cancer | 6.59e-07 | 1 |
maxillary sinus cancer | 6.59e-07 | 1 |