FFCP PHASE1:Hg19::chr1:98518907..98518920,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1861 | |||
|description=CAGE_peak_at_chr1:98518907..98518920,+ | |||
|id=chr1:98518907..98518920,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.67e-23!7;CL:0000126!2.67e-23!7;CL:0000127!2.67e-23!7;CL:0002453!2.67e-23!7;CL:0002605!1.11e-20!3;CL:0000064!8.79e-20!3;CL:0005012!8.79e-20!3;CL:0000067!8.79e-20!3;CL:0002304!8.79e-20!3;CL:0000133!3.96e-15!59;CL:0002319!3.65e-14!25;CL:0000221!3.19e-12!71;CL:0000243!1.82e-09!15;CL:0000125!1.82e-09!15;CL:0000030!1.82e-09!15;CL:0000339!1.82e-09!15;CL:0000095!1.92e-08!17;CL:0000123!1.92e-08!17;CL:0000047!1.14e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.37e-66;3!CL:0000128;1.50e-50;7!CL:0000126;1.50e-50;7!CL:0000127;1.50e-50;7!CL:0000243;3.54e-21;15!CL:0000125;3.54e-21;15!CL:0002319;1.39e-20;25!CL:0000095;5.29e-19;17!CL:0000047;2.74e-12;2!CL:0000064;1.26e-08;3!CL:0000067;1.26e-08;3!CL:0005012;1.26e-08;3!CL:0002304;1.26e-08;3!CL:0000083;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,9.82e-67,3;CL:0000128,8.98e-51,7;CL:0000126,8.98e-51,7;CL:0000127,8.98e-51,7;CL:0002453,8.98e-51,7;CL:0000243,2.88e-21,15;CL:0000125,2.88e-21,15;CL:0000030,2.88e-21,15;CL:0000339,2.88e-21,15;CL:0002319,1.31e-20,25;CL:0000095,4.39e-19,17;CL:0000123,4.39e-19,17;CL:0000133,5.10e-13,59;CL:0000221,9.88e-11,72;CL:0000333,1.16e-08,41;CL:0000064,1.40e-08,3;CL:0000067,1.40e-08,3;CL:0005012,1.40e-08,3;CL:0002304,1.40e-08,3;CL:0000083,8.61e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000339;3.54e-21;15!CL:0000133;3.46e-13;59!CL:0000221;3.20e-08;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;2.74e-12;2!DOID:4905;2.74e-12;2!DOID:3498;2.74e-12;2!DOID:1793;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.59e-12,2;DOID:4905,2.59e-12,2;DOID:3498,2.59e-12,2;DOID:1793,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001778!8.79e-20!3;UBERON:0001775!8.79e-20!3;UBERON:0000488!5.57e-15!4;UBERON:0002020!3.62e-13!34;UBERON:0003528!3.62e-13!34;UBERON:0001017!6.33e-12!82;UBERON:0000073!1.29e-11!94;UBERON:0001016!1.29e-11!94;UBERON:0003075!1.89e-11!86;UBERON:0007284!1.89e-11!86;UBERON:0005743!2.95e-11!86;UBERON:0000956!2.99e-11!25;UBERON:0000203!2.99e-11!25;UBERON:0001869!3.42e-11!32;UBERON:0002791!7.90e-11!33;UBERON:0002346!7.96e-11!90;UBERON:0001893!1.74e-10!34;UBERON:0003056!2.22e-10!61;UBERON:0002203!3.71e-10!6;UBERON:0001768!3.71e-10!6;UBERON:0004121!2.06e-09!169;UBERON:0001049!4.08e-09!57;UBERON:0005068!4.08e-09!57;UBERON:0006241!4.08e-09!57;UBERON:0007135!4.08e-09!57;UBERON:0000924!4.11e-09!173;UBERON:0006601!4.11e-09!173;UBERON:0000955!9.36e-09!69;UBERON:0006238!9.36e-09!69;UBERON:0002616!9.37e-09!59;UBERON:0002780!1.52e-08!41;UBERON:0001890!1.52e-08!41;UBERON:0006240!1.52e-08!41;UBERON:0003080!2.56e-08!42;UBERON:0001874!2.17e-07!1;UBERON:0000033!3.87e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;8.96e-09;3!UBERON:0001235;8.96e-09;3!UBERON:0006858;8.96e-09;3!UBERON:0001778;1.26e-08;3!UBERON:0002114;1.26e-08;2!UBERON:0001775;1.26e-08;3!UBERON:0000956;2.43e-08;25!UBERON:0000203;2.43e-08;25!UBERON:0002791;5.84e-07;32!UBERON:0001869;5.84e-07;32!UBERON:0000488;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,8.96e-09,3;UBERON:0001235,8.96e-09,3;UBERON:0006858,8.96e-09,3;UBERON:0002114,1.30e-08,2;UBERON:0001778,1.40e-08,3;UBERON:0001775,1.40e-08,3;UBERON:0000956,2.34e-08,25;UBERON:0000203,2.34e-08,25;UBERON:0001017,8.18e-07,81;UBERON:0000488,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,1.71741592278634,3.96935832711364,3.01302335027527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,1.05401742831751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6408156524854,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94310496754094,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,1.69946265673865,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873677105536111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30905207102113,0,0,0,0,0.378499274505237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:98518907..98518920,+ | |||
}} |
Revision as of 19:43, 10 January 2014
Short description: | p@chr1:98518907..98518920, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:98518907..98518920, + |
Coexpression cluster: | C1861_astrocytoma_Astrocyte_Ciliary_adrenal_Neural_ductal_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 9.82e-67 | 3 |
oligodendrocyte | 8.98e-51 | 7 |
macroglial cell | 8.98e-51 | 7 |
astrocyte | 8.98e-51 | 7 |
oligodendrocyte precursor cell | 8.98e-51 | 7 |
glial cell (sensu Vertebrata) | 2.88e-21 | 15 |
glial cell | 2.88e-21 | 15 |
glioblast | 2.88e-21 | 15 |
glioblast (sensu Vertebrata) | 2.88e-21 | 15 |
neural cell | 1.31e-20 | 25 |
neuron associated cell | 4.39e-19 | 17 |
neuron associated cell (sensu Vertebrata) | 4.39e-19 | 17 |
neurectodermal cell | 5.10e-13 | 59 |
ectodermal cell | 9.88e-11 | 72 |
migratory neural crest cell | 1.16e-08 | 41 |
ciliated cell | 1.40e-08 | 3 |
ciliated epithelial cell | 1.40e-08 | 3 |
multi-ciliated epithelial cell | 1.40e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.40e-08 | 3 |
epithelial cell of pancreas | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 8.96e-09 | 3 |
adrenal cortex | 8.96e-09 | 3 |
adrenal/interrenal gland | 8.96e-09 | 3 |
duodenum | 1.30e-08 | 2 |
ciliary epithelium | 1.40e-08 | 3 |
ciliary body | 1.40e-08 | 3 |
cerebral cortex | 2.34e-08 | 25 |
pallium | 2.34e-08 | 25 |
central nervous system | 8.18e-07 | 81 |
atypical epithelium | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.59e-12 | 2 |
pancreatic carcinoma | 2.59e-12 | 2 |
pancreatic ductal adenocarcinoma | 2.59e-12 | 2 |
pancreatic cancer | 8.61e-07 | 4 |