FFCP PHASE1:Hg19::chr1:87012691..87012711,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22802 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2018 | |||
|TSSclassifier=strong | |||
|UniProt=Q14CN2 | |||
|association_with_transcript=-47bp_to_NM_012128,NR_024602,uc009wcs.2,uc009wct.2,uc009wcu.2_5end | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_6_at_CLCA4_5end | |||
|id=chr1:87012691..87012711,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.16e-26;1!UBERON:0008814;1.29e-13;2!UBERON:0010056;1.29e-13;2 | |||
|ontology_enrichment_disease=DOID:1749!1.73e-12!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005383!2.27e-10!3;UBERON:0005382!2.27e-10!3;UBERON:0002372!7.56e-09!1;UBERON:0001961!7.56e-09!1;UBERON:0001744!7.56e-09!1;UBERON:0001735!7.56e-09!1;UBERON:0001154!1.27e-08!1;UBERON:0001153!1.27e-08!1;UBERON:0007029!1.37e-08!1;UBERON:0000997!2.84e-08!1;UBERON:0005056!2.84e-08!1;UBERON:0007023!3.00e-08!115;UBERON:0001874!3.06e-08!1;UBERON:0000369!5.43e-08!4;UBERON:0002435!5.43e-08!4;UBERON:0000204!5.43e-08!4;UBERON:0010082!5.43e-08!4;UBERON:0000161!6.06e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;8.64e-26;1!UBERON:0005795;8.64e-26;1!UBERON:0001961;8.64e-26;1!UBERON:0001744;8.64e-26;1!UBERON:0001042;8.64e-26;1!UBERON:0001735;8.64e-26;1!UBERON:0003127;8.28e-14;2!UBERON:0000341;8.28e-14;2!UBERON:0006562;1.29e-13;2!UBERON:0001043;1.01e-09;3!UBERON:0001723;1.60e-09;3!UBERON:0001033;1.60e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,5.93e-26,1;UBERON:0001961,5.93e-26,1;UBERON:0001744,5.93e-26,1;UBERON:0001735,5.93e-26,1;UBERON:0000341,7.30e-14,2;UBERON:0003127,8.28e-14,2;UBERON:0001042,8.06e-11,10;UBERON:0009145,8.06e-11,10;UBERON:0006562,6.34e-10,11;UBERON:0001043,1.01e-09,3;UBERON:0009143,1.01e-09,3;UBERON:0001723,1.81e-09,3;UBERON:0001033,1.81e-09,3;UBERON:0010056,1.81e-09,3;UBERON:0007023,6.15e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0.139423744278603,2.00070672109872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,12.7055611599829,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,0,0,0,0,0,0,1.08858373948481,0,1.27968900727716,2.07994395638761,0,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p6@CLCA4 | |||
}} |
Revision as of 19:23, 10 January 2014
Short description: | p6@CLCA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CLCA4_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -47bp_to_NM_012128, NR_024602, uc009wcs.2, uc009wct.2, uc009wcu.2_5end |
EntrezGene: | CLCA4 |
HGNC: | 2018 |
UniProt: | Q14CN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 5.93e-26 | 1 |
mucosa-associated lymphoid tissue | 5.93e-26 | 1 |
lymphoid tissue | 5.93e-26 | 1 |
tonsillar ring | 5.93e-26 | 1 |
throat | 7.30e-14 | 2 |
open tracheal system trachea | 8.28e-14 | 2 |
chordate pharynx | 8.06e-11 | 10 |
pharyngeal region of foregut | 8.06e-11 | 10 |
pharynx | 6.34e-10 | 11 |
esophagus | 1.01e-09 | 3 |
esophageal region | 1.01e-09 | 3 |
tongue | 1.81e-09 | 3 |
gustatory system | 1.81e-09 | 3 |
future tongue | 1.81e-09 | 3 |
adult organism | 6.15e-08 | 114 |