FFCP PHASE1:Hg19::chr1:86044028..86044041,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2715 | |||
|TSSclassifier=strong | |||
|UniProt=Q5HYC8,B4E3V1 | |||
|association_with_transcript=4bp_to_ENST00000535924,NM_001134445,uc001dlc.2_5end | |||
|coexpression_cluster_id=C934 | |||
|description=CAGE_peak_10_at_DDAH1_5end | |||
|id=chr1:86044028..86044041,- | |||
|ontology_enrichment_celltype=CL:0000055!1.85e-35!180;CL:0000057!4.67e-18!75;CL:0000680!1.67e-16!57;CL:0000056!1.67e-16!57;CL:0000355!1.67e-16!57;CL:0000187!4.03e-15!54;CL:0000192!6.36e-14!42;CL:0000514!6.36e-14!42;CL:0000183!1.79e-13!59;CL:0000359!6.61e-12!32;CL:0000393!1.12e-11!60;CL:0000211!1.12e-11!60;CL:0000222!3.49e-11!119;CL:0002620!2.67e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.04e-12;23!CL:0000359;4.77e-10;32!CL:0000192;5.87e-10;43!CL:0000057;3.83e-09;73!CL:0002320;4.37e-08;188!CL:0000187;9.18e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.30e-21,76;CL:0000048,1.35e-16,427;CL:0000723,8.46e-16,433;CL:0000680,5.06e-15,58;CL:0000056,5.06e-15,58;CL:0000355,5.06e-15,58;CL:0000034,8.93e-15,441;CL:0000192,7.48e-14,43;CL:0000514,7.48e-14,43;CL:0000187,3.18e-13,55;CL:0002620,1.15e-12,23;CL:0000393,6.93e-11,61;CL:0000211,6.93e-11,61;CL:0000359,1.12e-10,32;CL:0000134,5.30e-07,354;CL:0002320,5.93e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;5.87e-10;43!CL:0000355;1.13e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.98e-07;5!DOID:450;8.98e-07;5!DOID:66;8.98e-07;5!DOID:423;8.98e-07;5!DOID:0080000;8.98e-07;5!DOID:11722;8.98e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.60e-07,5;DOID:450,8.60e-07,5;DOID:66,8.60e-07,5;DOID:423,8.60e-07,5;DOID:0080000,8.60e-07,5;DOID:11722,8.60e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.45e-17!83;UBERON:0002329!1.45e-17!83;UBERON:0003077!1.45e-17!83;UBERON:0003059!1.45e-17!83;UBERON:0007282!1.45e-17!83;UBERON:0009618!1.45e-17!83;UBERON:0007285!1.45e-17!83;UBERON:0004290!1.19e-15!70;UBERON:0002385!9.56e-15!63;UBERON:0001015!9.56e-15!63;UBERON:0000383!9.56e-15!63;UBERON:0005256!1.22e-14!143;UBERON:0001134!1.53e-14!61;UBERON:0002036!1.53e-14!61;UBERON:0003082!1.53e-14!61;UBERON:0000486!5.35e-13!82;UBERON:0000475!8.01e-12!365;UBERON:0002100!8.02e-12!216;UBERON:0003104!3.58e-10!238;UBERON:0009142!3.58e-10!238;UBERON:0000481!4.32e-09!347;UBERON:0004872!5.45e-09!84;UBERON:0001637!2.11e-08!42;UBERON:0003509!2.11e-08!42;UBERON:0004572!2.11e-08!42;UBERON:0002049!5.83e-08!79;UBERON:0007798!5.83e-08!79;UBERON:0004573!1.81e-07!33;UBERON:0004571!1.81e-07!33;UBERON:0001981!7.52e-07!60;UBERON:0007500!7.52e-07!60;UBERON:0004537!7.52e-07!60;UBERON:0006965!7.52e-07!60;UBERON:0000468!9.35e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.56e-08;6!UBERON:0002358;1.56e-08;6!UBERON:0003684;1.56e-08;6!UBERON:0001178;1.56e-08;6!UBERON:0002384;8.78e-08;198!UBERON:0002097;1.01e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.71e-15,73;UBERON:0002329,8.89e-15,71;UBERON:0003059,8.89e-15,71;UBERON:0007282,8.89e-15,71;UBERON:0004290,8.89e-15,71;UBERON:0009618,8.89e-15,71;UBERON:0003077,2.19e-14,72;UBERON:0007285,2.19e-14,72;UBERON:0007503,1.04e-13,78;UBERON:0002385,2.43e-13,64;UBERON:0001015,2.43e-13,64;UBERON:0000383,2.43e-13,64;UBERON:0001134,2.74e-13,62;UBERON:0002036,2.74e-13,62;UBERON:0003082,2.74e-13,62;UBERON:0000486,4.79e-12,83;UBERON:0005256,6.22e-11,122;UBERON:0002097,1.00e-09,41;UBERON:0002199,1.99e-09,46;UBERON:0002416,1.99e-09,46;UBERON:0003688,1.74e-08,6;UBERON:0002358,1.74e-08,6;UBERON:0003684,1.74e-08,6;UBERON:0001178,1.74e-08,6;UBERON:0003104,2.06e-08,160;UBERON:0009142,2.06e-08,160;UBERON:0002100,1.28e-07,199;UBERON:0003102,1.49e-07,99;UBERON:0000490,2.14e-07,148;UBERON:0002384,2.98e-07,371 | |||
|phase1_expression=6.17706489519893,7.70761886007539,11.8401699440616,14.0102617694383,7.59833860526389,13.9574163856059,2.53299878168311,0,0.261185628199839,0.737201809504527,1.39560233594486,0.436882744260345,0.263766978228454,0.247532705920093,0,0.672325146451775,3.01347264011988,1.46062018077475,1.95173119516203,1.47745269692145,1.83600622119828,0.626909442956176,1.14494394852423,1.23186982565596,4.01736446703369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,5.37022759742827,8.67453965722959,7.52006865953834,4.05570253090306,2.3858578411533,2.43317435151318,0.283604451492204,1.33037638477538,3.16205228495254,0.523916301990851,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0,0.208994966536811,0,0,1.33888245105868,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,6.46063537203914,4.93858995491861,8.87141511448566,10.3261183469573,0.709336764396714,7.8494864019923,0,1.72667283892012,2.17847724779836,0.404132016209064,0.490385709340376,1.05950199351452,0,1.17160715916898,0,0,1.04614076386261,1.05691048779388,1.29498355494505,0.98315564691574,1.22492502752936,1.35117749042945,0.516628905878827,0,5.19260551484969,0.910161361938026,0,1.0100166837244,0.625592599359821,2.77064115484183,5.26773145057006,6.43624371177941,5.10809400282429,1.24775401476023,14.351170855109,6.83383644219416,5.93409323246773,6.30191301777245,6.38925681278321,17.7771972631484,7.81690796592677,7.76371128309825,8.18470843354068,12.3692549379616,9.38908966151453,1.93975268182574,13.845374108148,6.2466300901137,3.89989362314122,0,0.545492241181669,0,0,0,0.116193942869518,0,0,0,1.56449532329816,3.85944562915731,1.38134921352481,4.64367928031979,3.60939740834793,0.709840800239063,0.337169380156203,0.241011029883482,0.330881918197182,1.08939722046203,0.237270619111097,0.269662616320329,0.588664395376038,0.769494313892781,1.4763109092493,0,2.057870056657,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0.325808305310325,1.03993478527958,0,0,3.05262605013136,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,1.45770409648969,2.61576041299968,0.95339771567235,1.16344544182,0,0.845302752556,10.3715865468099,3.12022310734098,1.28603687131071,1.41849132023278,0.532844358032199,3.71742783511184,0.542621605391443,3.29296134712308,0.65147236858747,3.55391948742546,0.791951872933429,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,5.99062138728957,3.44585807502342,0,5.64647096003559,1.43833425785268,3.04403637507822,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,1.35632511849868,6.86303843051664,7.13715955188647,7.88512075169673,4.33423235473039,1.80567659836631,4.5481500811197,2.0694614258501,2.65690239414175,3.68738337083406,2.5196248195744,0,0,0,0,0,0.303127571446259,0,0.604780586659361,5.21026396419431,9.97502826372406,7.85848264412606,7.43207065683066,15.3512174720011,10.1337970320473,10.3892646511494,1.07946785661859,0.710246901252508,0.164254312027618,0,0.929683027679674,0.120859449591622,0,0,3.4444334449382,2.36718518408732,3.14698595902618,0,0.539107359730903,1.56869953835371,0,0.527758144464379,0,0,1.0795795805107,0,0.541892875087706,0.501689773854853,0,0,0.895499018888713,0,0,0.512900250232778,1.96808787419823,2.60302715731442,0.721287081534056,7.6002655799225,8.99353549134409,0.574265537996172,0,6.42735719376638,0.676695028044854,0.616194468458578,0.307007349452259,1.65403886981437,0.751941714077915,1.0151168573996,1.36362603865761,0.623224249527161,0,0,0,0,7.90237433805386,7.55549632393536,3.485186350803,0.308033580176089,0.532306030317022,0.869932992075073,1.48259375283136,3.86437194203376,2.60510858551767,4.42931194606216,4.76575484809562,0,0.855877976067841,0.636406495851874,2.35484592059769,5.39617372749944,2.74537029736055,3.29874726567922,0.808729926293264,1.58510321173008,0.842516912477962,1.46290121726877,0,2.11300293513511,3.8219975194236,2.82810863907426,1.13008116620243,0.551365343546124,1.99031692572366,2.19225442626881,0,1.31178950409327,2.23201414658974,2.16876448669825,1.40847801266121,3.29846110069318,7.36867807598409,2.85336841185,1.41904425628239,1.05553817648832,0.987884678879706,0.379473173765715,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.568272293612826,0,0.296964680832639,0,0,0,0,0,3.3780065300479,1.79323189425963,0.552567831062295,0,0.511343412510774,0,7.15391051622157,0.539210106883961,0,0,0.986434056369336,0,7.77958931012458,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0.435753854075961,0,1.76985594558733,2.73460934032803,0,0.448788222048861,0,0.31900115973192,4.48828207669125,0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| |||
|short_description=p10@DDAH1 | |||
}} |
Revision as of 19:21, 10 January 2014
Short description: | p10@DDAH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_DDAH1_5end |
Coexpression cluster: | C934_basal_Preadipocyte_Adipocyte_Fibroblast_Mesenchymal_spindle_Myoblast |
Association with transcript: | 4bp_to_ENST00000535924, NM_001134445, uc001dlc.2_5end |
EntrezGene: | DDAH1 |
HGNC: | 2715 |
UniProt: | Q5HYC8B4E3V1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.30e-21 | 76 |
multi fate stem cell | 1.35e-16 | 427 |
somatic stem cell | 8.46e-16 | 433 |
muscle precursor cell | 5.06e-15 | 58 |
myoblast | 5.06e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.06e-15 | 58 |
stem cell | 8.93e-15 | 441 |
smooth muscle cell | 7.48e-14 | 43 |
smooth muscle myoblast | 7.48e-14 | 43 |
muscle cell | 3.18e-13 | 55 |
skin fibroblast | 1.15e-12 | 23 |
electrically responsive cell | 6.93e-11 | 61 |
electrically active cell | 6.93e-11 | 61 |
vascular associated smooth muscle cell | 1.12e-10 | 32 |
mesenchymal cell | 5.30e-07 | 354 |
connective tissue cell | 5.93e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 4.71e-15 | 73 |
somite | 8.89e-15 | 71 |
presomitic mesoderm | 8.89e-15 | 71 |
presumptive segmental plate | 8.89e-15 | 71 |
dermomyotome | 8.89e-15 | 71 |
trunk paraxial mesoderm | 8.89e-15 | 71 |
paraxial mesoderm | 2.19e-14 | 72 |
presumptive paraxial mesoderm | 2.19e-14 | 72 |
epithelial vesicle | 1.04e-13 | 78 |
muscle tissue | 2.43e-13 | 64 |
musculature | 2.43e-13 | 64 |
musculature of body | 2.43e-13 | 64 |
skeletal muscle tissue | 2.74e-13 | 62 |
striated muscle tissue | 2.74e-13 | 62 |
myotome | 2.74e-13 | 62 |
multilaminar epithelium | 4.79e-12 | 83 |
trunk mesenchyme | 6.22e-11 | 122 |
skin of body | 1.00e-09 | 41 |
integument | 1.99e-09 | 46 |
integumental system | 1.99e-09 | 46 |
omentum | 1.74e-08 | 6 |
peritoneum | 1.74e-08 | 6 |
abdominal cavity | 1.74e-08 | 6 |
visceral peritoneum | 1.74e-08 | 6 |
mesenchyme | 2.06e-08 | 160 |
entire embryonic mesenchyme | 2.06e-08 | 160 |
trunk | 1.28e-07 | 199 |
surface structure | 1.49e-07 | 99 |
unilaminar epithelium | 2.14e-07 | 148 |
connective tissue | 2.98e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.60e-07 | 5 |
myotonic disease | 8.60e-07 | 5 |
muscle tissue disease | 8.60e-07 | 5 |
myopathy | 8.60e-07 | 5 |
muscular disease | 8.60e-07 | 5 |
myotonic dystrophy | 8.60e-07 | 5 |