FFCP PHASE1:Hg19::chr1:61542922..61542955,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4774 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7784 | |||
|TSSclassifier=strong | |||
|UniProt=F5H0R0,B4DRJ3,Q12857 | |||
|association_with_transcript=0bp_to_ENST00000407417,NM_001145511,uc001czy.2_5end | |||
|description=CAGE_peak_10_at_NFIA_5end | |||
|id=chr1:61542922..61542955,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.94e-16!140;CL:0002031!9.37e-14!124;CL:0000037!2.91e-12!172;CL:0000566!2.91e-12!172;CL:0000791!5.28e-12!18;CL:0000789!5.28e-12!18;CL:0002420!5.28e-12!18;CL:0002419!5.28e-12!18;CL:0000790!5.28e-12!18;CL:0002087!5.30e-12!119;CL:0002032!7.27e-11!165;CL:0000837!7.27e-11!165;CL:0000988!3.81e-10!182;CL:0000542!3.13e-09!53;CL:0000051!3.13e-09!53;CL:0000838!4.43e-09!52;CL:0000625!5.01e-09!11;CL:0000084!1.17e-08!25;CL:0000827!1.17e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.29e-18;18!CL:0000789;1.29e-18;18!CL:0002419;1.29e-18;18!CL:0000625;9.53e-16;11!CL:0000084;1.22e-13;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.06e-19,18;CL:0000789,3.06e-19,18;CL:0002420,3.06e-19,18;CL:0002419,3.06e-19,18;CL:0000790,3.06e-19,18;CL:0000625,1.70e-16,11;CL:0000084,6.56e-14,25;CL:0000827,6.56e-14,25;CL:0000738,7.95e-12,136;CL:0002031,1.44e-09,120;CL:0002087,2.10e-09,115;CL:0002393,2.46e-09,9;CL:0002397,2.46e-09,9;CL:0000838,3.62e-09,52;CL:0000542,7.09e-09,53;CL:0000051,7.09e-09,53;CL:0000037,1.03e-07,168;CL:0002032,5.42e-07,161;CL:0000837,5.42e-07,161;CL:0000988,9.70e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.29e-18;18!UBERON:0006601;7.44e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.41e-40!115;UBERON:0001049!2.27e-18!57;UBERON:0005068!2.27e-18!57;UBERON:0006241!2.27e-18!57;UBERON:0007135!2.27e-18!57;UBERON:0002780!1.13e-15!41;UBERON:0001890!1.13e-15!41;UBERON:0006240!1.13e-15!41;UBERON:0002616!1.67e-15!59;UBERON:0003080!6.67e-15!42;UBERON:0001017!3.03e-13!82;UBERON:0005743!2.07e-12!86;UBERON:0000955!2.32e-12!69;UBERON:0006238!2.32e-12!69;UBERON:0003075!3.61e-12!86;UBERON:0007284!3.61e-12!86;UBERON:0001893!9.32e-12!34;UBERON:0002020!9.75e-12!34;UBERON:0003528!9.75e-12!34;UBERON:0002346!1.16e-11!90;UBERON:0002791!2.53e-11!33;UBERON:0000073!2.97e-11!94;UBERON:0001016!2.97e-11!94;UBERON:0001869!7.88e-11!32;UBERON:0003056!1.43e-09!61;UBERON:0002390!2.55e-08!102;UBERON:0003061!2.55e-08!102;UBERON:0000956!9.68e-08!25;UBERON:0000203!9.68e-08!25;UBERON:0002619!1.47e-07!22;UBERON:0002193!2.45e-07!112;UBERON:0000153!4.41e-07!129;UBERON:0007811!4.41e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.66e-13;53!UBERON:0002616;1.66e-13;53!UBERON:0002780;3.54e-12;41!UBERON:0001890;3.54e-12;41!UBERON:0007023;2.30e-11;114!UBERON:0003528;7.57e-10;34!UBERON:0002020;7.57e-10;34!UBERON:0001893;8.22e-10;34!UBERON:0001869;2.01e-09;32!UBERON:0002619;2.63e-09;22!UBERON:0002791;1.09e-08;32!UBERON:0000200;1.68e-08;6!UBERON:0001017;5.51e-08;75!UBERON:0000956;8.14e-08;25!UBERON:0000203;8.14e-08;25!UBERON:0001894;8.89e-08;7!UBERON:0001950;1.73e-07;20!UBERON:0003296;2.50e-07;4!UBERON:0010133;2.50e-07;4!UBERON:0000955;2.52e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.78e-40,114;UBERON:0001049,1.44e-22,56;UBERON:0005068,1.44e-22,56;UBERON:0006241,1.44e-22,56;UBERON:0007135,1.44e-22,56;UBERON:0000073,2.40e-21,53;UBERON:0002616,2.40e-21,53;UBERON:0002780,4.33e-17,41;UBERON:0001890,4.33e-17,41;UBERON:0003080,4.33e-17,41;UBERON:0006240,4.33e-17,41;UBERON:0001017,2.37e-16,81;UBERON:0000955,2.17e-15,68;UBERON:0006238,2.17e-15,68;UBERON:0001016,1.59e-14,89;UBERON:0003075,4.98e-14,82;UBERON:0007284,4.98e-14,82;UBERON:0002346,6.83e-13,86;UBERON:0001893,1.09e-11,34;UBERON:0003528,1.16e-11,34;UBERON:0002020,1.16e-11,34;UBERON:0001869,3.67e-11,32;UBERON:0003056,5.71e-11,61;UBERON:0010371,1.90e-10,104;UBERON:0002791,5.73e-10,32;UBERON:0002619,1.75e-09,22;UBERON:0010314,5.82e-09,132;UBERON:0000200,2.21e-08,6;UBERON:0000956,5.73e-08,25;UBERON:0000203,5.73e-08,25;UBERON:0001894,7.74e-08,7;UBERON:0006222,7.74e-08,7;UBERON:0001950,1.18e-07,20;UBERON:0003296,2.17e-07,4;UBERON:0010133,2.17e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,3.14691421479123,3.0706351847777,1.39334510984468,0,0.30120591877825,0,0.46480320348181,0.710846162437108,0.880801318004542,1.66198622559563,1.00272223735071,1.73608696572681,1.34349284543955,1.6194683300949,1.54545340580512,1.16318591023652,0.377875943688809,0.485168122375632,0.464858073811369,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0.989553900560148,0.997318288108159,0.426224750532694,0.580418477257168,0,0,0,0.521482918420201,0.65156653411535,0,0.368277635987565,0,0.845021145247767,1.27562579979026,2.09658645508376,1.23561494261145,0.901061357049038,1.6072558669708,1.71007646244749,3.38158351238453,2.37463399894024,0,0.546138611262131,0.889509253863555,1.28019066769952,0.800791974072025,1.72425731986345,0.661044872784862,0.954053754535364,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,1.57367816091066,0.786021525498329,2.05601498999509,0.167186495390678,1.95553359980154,0.946895611469467,1.94826728407911,0.222820913770347,1.17842362989935,1.32920336750173,1.08321545506006,0.128091319725675,0,0,0,0,2.66915813691709,2.1403266247177,1.04535523804977,0.226618685395132,3.06576394881537,2.74901956386104,4.80737414837055,1.91139248594458,1.95325036156926,6.65316431113862,2.71035214339991,2.30375900077953,4.99722906209383,3.78843603270427,1.64225599384209,2.01606743224732,2.40696176205157,1.73789284659359,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,0,0.945348171640679,0.443458794925128,0.175669571386252,1.17881167947941,0.364295288292542,0,0,0.522389211897802,0,0.476981248610684,1.71598473234038,0.74291500265913,0.596287222100115,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0.357198913136319,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,1.47730203652438,0.234004265139238,0,0,0,0,0,0,0,0.985326475791887,0.968532774145487,2.90259361757081,3.17063897517315,2.39860623510122,0,0.763976851116555,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.224170287987055,1.97030760201927,1.94064817373566,0.513372145118994,1.77866236955724,0,0.773288812777695,0.167516265334349,0,0.749007023947182,0,1.65766205374414,0.12269149171914,0.500170521059677,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0.343143423810856,1.86091223510599,0.431428401637234,1.17400313583789,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,0.618246069886334,0.0915694648183434,0.330037999682352,0,0,0,0,0,0,0,0.537101224341368,0,0.0852266274161009,0.0890320356467374,0,0,0.510450849978337,0,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.658589785919804,0,0,0,0,0,1.03558180854457,0,0,0,0,1.01489521846434,0,1.13929437434833,2.1440859791201,1.64544909234478,0.648473311192717,1.62009431171434,3.17250070517708,0,0,0.490080431962063,0.371606350251437,0.144269212976445,0,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0.835218521685727,0,0,0.33307196799782,0,0.18714054040822,0.586032717087576,0.121360521749513,1.00299045849731,0,0,0.296964680832639,0,0,3.23539657744179,0,0,0,1.9924798825107,1.38141957765574,0.503865495708552,0,0,0,0.0898683511473268,0,0,0.789147245095469,0,0,2.90799823828566,0.74214478529481,0,0.520855522170466,2.27395999990109,0,0.1137934482855,0.254253650292766,0.236387681767936,1.03423011972439,0,0.173624994933292,0.885741385813839,2.05013945663194,4.5774520895125,2.21158519862449,0.295547618953547,1.75508317723178,0,0.139423744278603,1.15425387755696,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0.37950746544837,1.11255605286265,0,0,0.141353071433941,0,0,1.23840590304675,0.611030144933625,0,0,0,2.69604531922708,0,1.1713222286267,0.729819156862664,0,0,1.18375320854817,0,0.30607276163049,1.64285107034069,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,2.27144668714639,0,0.19351266257817,0,0,0.775912131907355,0,0.677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| |||
|short_description=p10@NFIA | |||
}} |
Revision as of 18:45, 10 January 2014
Short description: | p10@NFIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NFIA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000407417, NM_001145511, uc001czy.2_5end |
EntrezGene: | NFIA |
HGNC: | 7784 |
UniProt: | F5H0R0B4DRJ3Q12857 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.06e-19 | 18 |
alpha-beta T cell | 3.06e-19 | 18 |
immature T cell | 3.06e-19 | 18 |
mature T cell | 3.06e-19 | 18 |
immature alpha-beta T cell | 3.06e-19 | 18 |
CD8-positive, alpha-beta T cell | 1.70e-16 | 11 |
T cell | 6.56e-14 | 25 |
pro-T cell | 6.56e-14 | 25 |
leukocyte | 7.95e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 1.44e-09 | 120 |
nongranular leukocyte | 2.10e-09 | 115 |
intermediate monocyte | 2.46e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.46e-09 | 9 |
lymphoid lineage restricted progenitor cell | 3.62e-09 | 52 |
lymphocyte | 7.09e-09 | 53 |
common lymphoid progenitor | 7.09e-09 | 53 |
hematopoietic stem cell | 1.03e-07 | 168 |
hematopoietic oligopotent progenitor cell | 5.42e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.42e-07 | 161 |
hematopoietic cell | 9.70e-07 | 177 |