FFCP PHASE1:Hg19::chr1:54355705..54355732,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=54432 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25231 | |||
|TSSclassifier=strong | |||
|UniProt=C9JFB2 | |||
|association_with_transcript=-198bp_to_ENST00000412288_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_YIPF1_5end | |||
|id=chr1:54355705..54355732,- | |||
|ontology_enrichment_celltype=CL:0002057!4.84e-65!42;CL:0000860!1.96e-60!45;CL:0002194!1.95e-45!63;CL:0000576!1.95e-45!63;CL:0000040!1.95e-45!63;CL:0000559!1.95e-45!63;CL:0000766!1.58e-44!76;CL:0002009!6.28e-44!65;CL:0000839!1.56e-40!70;CL:0000557!6.55e-40!71;CL:0002087!5.04e-32!119;CL:0000738!2.35e-31!140;CL:0000763!6.95e-29!112;CL:0000049!6.95e-29!112;CL:0002031!1.40e-25!124;CL:0000037!1.24e-24!172;CL:0000566!1.24e-24!172;CL:0000988!5.15e-23!182;CL:0002032!8.10e-22!165;CL:0000837!8.10e-22!165;CL:0000134!3.50e-11!358;CL:0002320!7.25e-11!365;CL:0000219!9.50e-10!390;CL:0000767!1.64e-09!3;CL:0000842!1.78e-09!3;CL:0000623!3.24e-09!3;CL:0000825!3.24e-09!3;CL:0000048!2.08e-08!430;CL:0000723!3.22e-08!436;CL:0000034!5.69e-08!444;CL:0000224!2.58e-07!4;CL:0002393!2.89e-07!9;CL:0002397!2.89e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.45e-37;33!CL:0002057;1.45e-37;33!CL:0000473;1.75e-29;39!CL:0000234;1.75e-29;39!CL:0000576;9.41e-27;48!CL:0002393;2.99e-25;6!CL:0002397;2.99e-25;6!CL:0000766;1.01e-20;69!CL:0002087;4.55e-13;104!CL:0000763;1.33e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-55,42;CL:0002057,1.62e-55,42;CL:0000473,1.66e-48,48;CL:0000234,1.66e-48,48;CL:0002194,1.10e-38,59;CL:0000576,1.10e-38,59;CL:0000040,1.10e-38,59;CL:0000559,1.10e-38,59;CL:0002009,2.04e-37,61;CL:0000839,1.41e-34,66;CL:0000557,4.65e-34,67;CL:0000766,1.11e-31,72;CL:0000763,5.64e-21,108;CL:0000049,5.64e-21,108;CL:0002087,1.16e-19,115;CL:0002031,8.13e-19,120;CL:0002393,4.41e-17,9;CL:0002397,4.41e-17,9;CL:0000738,1.60e-16,136;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.56e-38;42!CL:0000049;5.52e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.36e-35!80;UBERON:0001474!2.76e-32!86;UBERON:0002390!4.02e-32!102;UBERON:0003061!4.02e-32!102;UBERON:0002193!7.15e-29!112;UBERON:0004765!6.73e-27!101;UBERON:0001434!6.73e-27!101;UBERON:0002405!1.88e-25!115;UBERON:0002204!1.31e-14!167;UBERON:0003081!8.56e-13!216;UBERON:0002384!1.96e-10!375;UBERON:0001282!1.87e-07!1;UBERON:0009842!1.87e-07!1;UBERON:0003704!1.87e-07!1;UBERON:0001171!1.87e-07!1;UBERON:0001172!1.87e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.34e-30,76;UBERON:0001474,8.85e-28,82;UBERON:0004765,2.83e-25,90;UBERON:0002405,1.92e-24,93;UBERON:0002390,3.59e-23,98;UBERON:0003061,3.59e-23,98;UBERON:0001434,1.07e-22,100;UBERON:0002193,5.64e-21,108;UBERON:0002204,2.60e-13,167;UBERON:0003081,8.49e-11,203 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,3.87796785972314,2.20598892217156,2.38711957787437,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0.47296445977717,6.89491361473237,3.22742341791913,2.70852973188684,0,0.272906150057846,0,6.73384563215986,4.17207735198922,5.11469700639233,0,0,0,1.7412554317715,3.40431134814684,0,0.502497330513487,0,0,1.81619850790011,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@YIPF1 | |||
}} |
Revision as of 18:36, 10 January 2014
Short description: | p3@YIPF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_YIPF1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -198bp_to_ENST00000412288_5end |
EntrezGene: | YIPF1 |
HGNC: | 25231 |
UniProt: | C9JFB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.62e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-55 | 42 |
defensive cell | 1.66e-48 | 48 |
phagocyte | 1.66e-48 | 48 |
monopoietic cell | 1.10e-38 | 59 |
monocyte | 1.10e-38 | 59 |
monoblast | 1.10e-38 | 59 |
promonocyte | 1.10e-38 | 59 |
macrophage dendritic cell progenitor | 2.04e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.41e-34 | 66 |
granulocyte monocyte progenitor cell | 4.65e-34 | 67 |
myeloid leukocyte | 1.11e-31 | 72 |
myeloid cell | 5.64e-21 | 108 |
common myeloid progenitor | 5.64e-21 | 108 |
nongranular leukocyte | 1.16e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 8.13e-19 | 120 |
intermediate monocyte | 4.41e-17 | 9 |
CD14-positive, CD16-positive monocyte | 4.41e-17 | 9 |
leukocyte | 1.60e-16 | 136 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.34e-30 | 76 |
bone element | 8.85e-28 | 82 |
skeletal element | 2.83e-25 | 90 |
immune system | 1.92e-24 | 93 |
hematopoietic system | 3.59e-23 | 98 |
blood island | 3.59e-23 | 98 |
skeletal system | 1.07e-22 | 100 |
hemolymphoid system | 5.64e-21 | 108 |
musculoskeletal system | 2.60e-13 | 167 |
lateral plate mesoderm | 8.49e-11 | 203 |