FFCP PHASE1:Hg19::chr1:54204818..54204870,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148979 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_5_at_GLIS1_5end | |||
|id=chr1:54204818..54204870,- | |||
|ontology_enrichment_celltype=CL:0000055!1.46e-24!180;CL:0000057!7.68e-17!75;CL:0002620!1.34e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.91e-10;23!CL:0000062;7.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.99e-14,76;CL:0002620,6.33e-10,23;CL:0000062,2.55e-07,11;CL:0000375,2.55e-07,11;CL:0000335,2.55e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.32e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.35e-23!365;UBERON:0000033!3.93e-16!123;UBERON:0000481!6.75e-16!347;UBERON:0000153!1.15e-15!129;UBERON:0007811!1.15e-15!129;UBERON:0003075!2.06e-13!86;UBERON:0007284!2.06e-13!86;UBERON:0003102!1.37e-12!95;UBERON:0002346!1.45e-12!90;UBERON:0002616!5.78e-11!59;UBERON:0003056!2.79e-10!61;UBERON:0000914!4.20e-10!83;UBERON:0002329!4.20e-10!83;UBERON:0003077!4.20e-10!83;UBERON:0003059!4.20e-10!83;UBERON:0007282!4.20e-10!83;UBERON:0009618!4.20e-10!83;UBERON:0007285!4.20e-10!83;UBERON:0000955!1.59e-09!69;UBERON:0006238!1.59e-09!69;UBERON:0001049!1.76e-09!57;UBERON:0005068!1.76e-09!57;UBERON:0006241!1.76e-09!57;UBERON:0007135!1.76e-09!57;UBERON:0004121!2.95e-09!169;UBERON:0000064!3.46e-09!219;UBERON:0000924!7.01e-09!173;UBERON:0006601!7.01e-09!173;UBERON:0007023!1.00e-08!115;UBERON:0005743!2.46e-08!86;UBERON:0005256!5.45e-08!143;UBERON:0001017!6.82e-08!82;UBERON:0000119!1.01e-07!312;UBERON:0000468!1.03e-07!659;UBERON:0002199!1.15e-07!45;UBERON:0002416!1.15e-07!45;UBERON:0001444!1.37e-07!48;UBERON:0002020!1.63e-07!34;UBERON:0003528!1.63e-07!34;UBERON:0001869!1.76e-07!32;UBERON:0000073!2.53e-07!94;UBERON:0001016!2.53e-07!94;UBERON:0001893!2.78e-07!34;UBERON:0000483!3.41e-07!309;UBERON:0002791!5.92e-07!33;UBERON:0002097!8.44e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001434;2.66e-10;36!UBERON:0000075;1.91e-09;16!UBERON:0004765;3.27e-08;26!UBERON:0006876;1.33e-07;11!UBERON:0003129;9.73e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.87e-13,132;UBERON:0003104,4.29e-12,160;UBERON:0009142,4.29e-12,160;UBERON:0003102,8.68e-12,99;UBERON:0003075,1.70e-11,82;UBERON:0007284,1.70e-11,82;UBERON:0002346,3.10e-10,86;UBERON:0000075,1.44e-09,16;UBERON:0010371,2.59e-09,104;UBERON:0011137,6.12e-08,14;UBERON:0007503,6.51e-08,78;UBERON:0004121,7.61e-08,171;UBERON:0000924,7.61e-08,171;UBERON:0006601,7.61e-08,171;UBERON:0007524,9.79e-08,73;UBERON:0006876,1.22e-07,11;UBERON:0002097,1.62e-07,41;UBERON:0000955,2.12e-07,68;UBERON:0006238,2.12e-07,68;UBERON:0003056,2.28e-07,61;UBERON:0002199,3.12e-07,46;UBERON:0002416,3.12e-07,46;UBERON:0003077,3.13e-07,72;UBERON:0007285,3.13e-07,72;UBERON:0000073,3.59e-07,53;UBERON:0002616,3.59e-07,53;UBERON:0002329,6.45e-07,71;UBERON:0003059,6.45e-07,71;UBERON:0007282,6.45e-07,71;UBERON:0004290,6.45e-07,71;UBERON:0009618,6.45e-07,71;UBERON:0001049,7.93e-07,56;UBERON:0005068,7.93e-07,56;UBERON:0006241,7.93e-07,56;UBERON:0007135,7.93e-07,56;UBERON:0003129,8.05e-07,7;UBERON:0001444,9.32e-07,49 | |||
|phase1_expression=1.09007027562334,2.5692062866918,1.26858963686374,3.00219895059391,0.446961094427288,0.872338524100369,2.53299878168311,0.631719873426831,6.52964070499596,0.245733936501509,0,0,0,11.8815698841645,9.94192127183747,0,0,0,0,9.23407935575909,14.6880497695862,5.01527554364941,0.572471974262113,1.64249310087461,2.38531015230125,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,4.3372698286148,16.5441510509844,5.21447468258965,4.7717156823066,9.24606253575008,2.26883561193763,5.98669373148923,4.91874799881506,4.58426764241994,2.91436230634034,4.07862887062872,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,1.85372853138506,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,1.48000529050296,2.48968828319813,1.34710672069688,0.326923806226917,3.48122083583342,2.88087962239999,2.57753575017176,2.80944069147288,4.56377457235559,1.79338416662161,5.75429043354448,6.63679071909339,6.32028630160118,16.5364878716464,7.37005903870608,33.1675757574207,4.75201142912821,7.41800787835671,2.73048408581408,5.03032699271367,4.88174730466792,11.5109038282207,16.9009110445352,12.7303510055443,11.0335606487647,4.95785594391769,0.453728732640084,4.84352016359927,7.47450860864986,2.96704661623387,4.20127534518163,2.26715564324566,5.15281080091258,4.65292140828975,0.506328996723799,0.194874010322397,10.3497847440087,8.46859067509154,0.323292113637624,8.52023022039874,2.61955455391865,2.7129694769678,0.193260853163297,0.818238361772504,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,13.5080597020506,15.1948413487729,3.71494342425583,3.60939740834793,0.236613600079688,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,1.20097467208968,0.109750285408626,0,0,0.370353780634118,3.25808305310325,1.03993478527958,5.77325368101093,0.579652024875384,4.22671299248958,0.433099343283221,0,0,0,0,0,0,0,0,0,1.55952606966625,0,0,0,0,0,0,0,0.25248486685276,0.063497894292169,0.381988425558278,1.17217447210047,6.84289784090821,0.411309970813294,0,0,3.36393253036082,1.30788020649984,4.6936502925408,1.55126058909333,35.7656445851882,5.917119267892,0.26593811658487,0,12.8603687131071,4.25547396069835,10.1240428026118,0.142977993658148,8.68194568626309,4.93944202068461,4.88604276440603,0,1.58390374586686,0.602878754119172,2.61460037580088,0,0,0,0,1.67737398844108,2.29723871668228,1.42636905040718,1.88215698667853,8.83548186966649,6.44619467663624,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,16.0725854152073,22.5076734476855,2.71265023699736,2.70362119990049,5.88815663030634,2.36553622550902,7.37990914454093,7.22270639346525,2.27407504055985,4.1389228517002,3.98535359121262,9.03408925854345,3.12781012085098,18.2095076440349,10.9805895619474,0,0,0,0,1.66435439510497,0.30239029332968,0.248107807818777,3.37616341233737,2.80660094433074,1.40953064181271,1.02341449813341,3.05622450172854,0,0.771048469013278,0.710246901252508,0.9033987161519,1.55776328755086,0.697262270759755,0,0.601519410909855,0,1.83703117063371,7.4657378882754,9.30983346211911,0.902399225814824,1.07821471946181,14.9026456143602,2.92278449306521,1.47772280450026,0,0.170093705276516,7.77297297967702,4.62681758070868,11.6506968143857,15.5523829895005,1.27438136522519,0,7.83561641527624,0.219259876645935,0,0,3.60816110269676,0.650756789328606,0,30.675770714145,32.3437239688705,4.01985876597321,0,0,2.90012154876366,2.61882649094895,2.91656981979646,3.72158745708233,7.94909812025225,8.41096824702525,6.39199705620757,2.1367688555217,0,0,0.127612712494584,0,0.464845549297286,1.25924938732256,0,0.308033580176089,0.532306030317022,0,0.37064843820784,1.00187420719394,5.95453390975468,8.85862389212432,3.43134349062885,3.83846686967001,3.42351190427136,2.86382923133343,0,2.51821440616641,3.84351841630477,3.88780927740765,0.606547444719948,0,0,4.38870365180631,0.243713489631284,1.05650146756755,5.45999645631943,2.2624869112594,4.52032466480971,0,0,0,5.20897980840019,4.59126326432643,0.405820753925408,0,0,1.72093622644862,3.34046739444612,0.7133421029625,0,0.844430541190656,0.658589785919804,7.20999030154859,19.946279053964,0,0,1.08890984861323,0,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,1.92283328029452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0.994147647766298,5.06409899077846,0,0,0.211125408127993,1.39473591775749,6.07824614168525,0,0,0,2.17727711363265,0,0,0,2.86065876347107,0,7.77958931012458,1.93866549219044,1.76259386507517,0,0,0,3.62499787717397,0,0,0,0,0.874813840149763,0.694499979733169,0.885741385813839,4.22087535188928,1.52581736317083,3.20679853800551,3.25102380848902,0.87754158861589,0.1089384635189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| |||
|short_description=p5@GLIS1 | |||
}} |
Revision as of 18:36, 10 January 2014
Short description: | p5@GLIS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GLIS1_5end |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | GLIS1 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.99e-14 | 76 |
skin fibroblast | 6.33e-10 | 23 |
osteoblast | 2.55e-07 | 11 |
osteoprogenitor cell | 2.55e-07 | 11 |
mesenchyme condensation cell | 2.55e-07 | 11 |