FFCP PHASE1:Hg19::chr1:52521381..52521400,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51060 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24626 | |||
|TSSclassifier=strong | |||
|UniProt=O95831,O95881 | |||
|association_with_transcript=-334bp_to_NM_015913,uc001cti.2_5end | |||
|coexpression_cluster_id=C3985 | |||
|description=CAGE_peak_2_at_TXNDC12_5end | |||
|id=chr1:52521381..52521400,- | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-16!180;CL:0000548!9.60e-15!679;CL:0000004!9.60e-15!679;CL:0000255!9.60e-15!679;CL:0000012!7.41e-14!682;CL:0000057!3.50e-10!75;CL:0000220!2.20e-09!246;CL:0002321!2.93e-09!248;CL:0000136!8.07e-09!15;CL:0000680!1.38e-08!57;CL:0000056!1.38e-08!57;CL:0000355!1.38e-08!57;CL:0000144!1.51e-08!625;CL:0000187!2.34e-08!54;CL:0000192!5.57e-08!42;CL:0000514!5.57e-08!42;CL:0002076!1.94e-07!43;CL:0000223!1.95e-07!59;CL:0000183!3.50e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.70e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-10,76;CL:0000136,2.77e-10,15;CL:0000192,1.00e-07,43;CL:0000514,1.00e-07,43;CL:0002321,1.12e-07,250;CL:0000680,1.69e-07,58;CL:0000056,1.69e-07,58;CL:0000355,1.69e-07,58;CL:0000187,3.29e-07,55;CL:0000223,4.92e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!8.31e-08!143;DOID:14566!1.87e-07!239;DOID:162!4.94e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.27e-10!95;UBERON:0002100!1.15e-09!216;UBERON:0003104!1.45e-08!238;UBERON:0009142!1.45e-08!238;UBERON:0000475!1.29e-07!365;UBERON:0002199!1.41e-07!45;UBERON:0002416!1.41e-07!45;UBERON:0000914!1.81e-07!83;UBERON:0002329!1.81e-07!83;UBERON:0003077!1.81e-07!83;UBERON:0003059!1.81e-07!83;UBERON:0007282!1.81e-07!83;UBERON:0009618!1.81e-07!83;UBERON:0007285!1.81e-07!83;UBERON:0000486!2.48e-07!82;UBERON:0005256!2.84e-07!143;UBERON:0004290!7.63e-07!70;UBERON:0001134!9.23e-07!61;UBERON:0002036!9.23e-07!61;UBERON:0003082!9.23e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.67e-10,99;UBERON:0002199,4.79e-09,46;UBERON:0002416,4.79e-09,46;UBERON:0002100,2.54e-08,199;UBERON:0002097,2.03e-07,41;UBERON:0000486,8.13e-07,83;UBERON:0007524,1.00e-06,73 | |||
|phase1_expression=12.1724514111273,11.9896293378951,25.5127471413708,5.00366491765652,16.0905993993824,9.59572376510406,17.7309914717817,12.0026775951098,8.61912573059467,0.982935746006035,0.697801167972428,0.655324116390517,0.263766978228454,3.58922423584135,3.97676850873499,1.34465029290355,1.80808358407193,0.730310090387373,3.90346239032406,0.492484232307152,0.204000691244253,0.626909442956176,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0,3.67768489791571,0.90361775633475,17.0086844676722,0.697204805222715,0,0.880801318004542,0.553995408531877,0,0,0.447830948479849,0.32389366601898,0.257575567634187,0.436194716338694,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0,0,0.580418477257168,0,0,0.502497330513487,1.0429658368404,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,11.5076305659177,7.59022220007589,7.52006865953834,9.41502373245354,9.54343136461319,4.37971383272372,0.0945348171640679,0.443458794925128,0.702678285545008,0.523916301990851,5.46442932438813,2.59549109949101,1.9472843619281,0.696518949197069,0.930705723632056,0,0,0,0.79504962946682,0,0,1.13061588384802,0.838998872419812,0,0,0,0,0.66944122552934,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,3.48875241714027,19.8788780678127,6.83804762988731,4.63432132846266,5.44989579422746,0.709336764396714,2.24271040056923,3.20246987189115,2.96001058100592,0.311211035399766,7.54379763590253,0.326923806226917,0.908144565869588,0,7.49828581868149,2.49728061464256,1.1409436430889,2.09228152772521,2.70099346880659,2.91371299862637,0,1.83738754129404,0.245668634623536,16.3254734257709,3.56400857184616,8.65434252474949,1.82032272387605,4.31170885089743,0.168336113954066,0.875829639103749,1.38532057742091,4.82875382968922,3.98434134538726,10.3664260645552,0.453728732640084,0.717558542755448,13.6676728843883,9.32500365102072,1.80054657650641,9.68693774841326,8.24449728146013,13.0281799432113,2.02531598689519,9.64626351095866,3.28163906517349,15.1882332759794,3.71785930683267,1.42003837006646,3.92933183087797,2.37384829234683,0.386521706326594,0.545492241181669,0.860413786167011,0.365921118388786,0.530119073285941,0.116193942869518,0.310983165046111,0.252320850875628,0,3.12899064659632,3.21620469096443,0,3.25057549622385,4.33127689001751,0.354920400119532,0.168584690078102,0.241011029883482,0.55146986366197,0.217879444092406,0.474541238222193,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0.4115740113314,0,1.26755034821831,0,1.77236972004421,0,4.5505722260952,1.88724591328378,2.63400684980701,25.8524032492525,2.31216636546751,5.74048359982883,16.6162235708266,0,0,0.34779121492523,6.34006948873437,0,0.462985512576611,0.190254152234598,0,0,0,0.936017060556951,0.891786973732369,0,0.839910640994298,1.55952606966625,14.8667147686728,5.81267877027924,0.383382679165211,0,0,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,3.4214489204541,0,0.300343057843917,0,2.24262168690721,2.1798003441664,0.5867062865676,8.27338980849778,0,0,6.64845291462176,3.12022310734098,0.257207374262142,0,0,14.7267333467892,11.3950537132203,2.46972101034231,0.325736184293735,11.727934308504,2.37585561880029,1.50719688529793,3.48613383440118,1.19967589418468,0,0,0,5.03212196532324,12.6348129417525,1.42636905040718,2.17171960001369,1.84928690295345,1.43248770591916,1.00876629594175,0,0,0,0.254094624222463,2.60279707715243,0,0.167516265334349,0,0,0,0.414415513436035,1.2269149171914,0.500170521059677,9.22301080579101,2.9115920614313,3.7470087647404,9.30444248700215,3.5142424497814,13.2416283880196,18.1926003244788,30.0071906748264,2.65690239414175,4.42486004500088,1.65078867489357,0.783204629850962,0,0.206768026122887,0,0.106727557803444,1.21251028578504,4.99306318531491,2.41912234663744,36.4718477493602,10.1284902370121,20.4881868936144,40.3638320155458,20.9799972117348,16.0853921143608,13.3576259800492,1.07946785661859,2.84098760501003,2.13530605635904,2.59627214591811,0.464841513839837,2.05461064305758,0.802025881213139,35.2670187624483,19.9777139806416,7.28364672026868,7.99858931252487,1.35359883872224,1.84836809050595,0.784349769176855,0,1.37217117560738,1.13733384070897,0.170093705276516,0.431831832204279,0,0.541892875087706,0.501689773854853,0.764628819135115,1.66215201785745,0,0.219259876645935,0.261435451024901,0,0,27.9825419411301,1.33953315142039,1.09883357782012,0.660075999364704,7.46545199395024,5.85054221432869,20.8889108797407,10.9237911670098,0.924291702687866,0.921022048356777,0.137836572484531,8.70103983433016,2.0302337147992,0.852266274161009,7.30062692303246,30.5777093417809,18.06586633232,2.16941611240793,27.7172319544207,18.5938219718914,11.6480568327337,2.0911118104818,2.46426864140871,1.59691809095107,6.08953094452551,4.633105477598,8.73061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| |||
|short_description=p2@TXNDC12 | |||
}} |
Revision as of 18:32, 10 January 2014
Short description: | p2@TXNDC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TXNDC12_5end |
Coexpression cluster: | C3985_Preadipocyte_squamous_mesenchymal_Prostate_cholangiocellular_Small_nasal |
Association with transcript: | -334bp_to_NM_015913, uc001cti.2_5end |
EntrezGene: | TXNDC12 |
HGNC: | 24626 |
UniProt: | O95831O95881 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-10 | 76 |
fat cell | 2.77e-10 | 15 |
smooth muscle cell | 1.00e-07 | 43 |
smooth muscle myoblast | 1.00e-07 | 43 |
embryonic cell | 1.12e-07 | 250 |
muscle precursor cell | 1.69e-07 | 58 |
myoblast | 1.69e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.69e-07 | 58 |
muscle cell | 3.29e-07 | 55 |
endodermal cell | 4.92e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.67e-10 | 99 |
integument | 4.79e-09 | 46 |
integumental system | 4.79e-09 | 46 |
trunk | 2.54e-08 | 199 |
skin of body | 2.03e-07 | 41 |
multilaminar epithelium | 8.13e-07 | 83 |
dense mesenchyme tissue | 1.00e-06 | 73 |