FFCP PHASE1:Hg19::chr1:52520828..52520888,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51060 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24626 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000472624_5end | |||
|description=CAGE_peak_1_at_TXNDC12_5end | |||
|id=chr1:52520828..52520888,- | |||
|ontology_enrichment_celltype=CL:0000063!2.55e-28!578;CL:0000012!3.62e-27!682;CL:0000548!3.96e-27!679;CL:0000004!3.96e-27!679;CL:0000255!3.96e-27!679;CL:0000003!2.21e-24!722;CL:0000144!6.57e-17!625;CL:0000763!4.76e-14!112;CL:0000049!4.76e-14!112;CL:0000066!6.17e-12!254;CL:0002371!2.32e-11!591;CL:0000766!2.50e-10!76;CL:0000034!2.05e-09!444;CL:0002009!3.56e-09!65;CL:0000134!8.64e-09!358;CL:0002194!1.16e-08!63;CL:0000576!1.16e-08!63;CL:0000040!1.16e-08!63;CL:0000559!1.16e-08!63;CL:0000723!1.96e-08!436;CL:0000048!2.64e-08!430;CL:0000557!6.44e-08!71;CL:0002320!2.21e-07!365;CL:0000219!2.46e-07!390;CL:0002032!2.52e-07!165;CL:0000837!2.52e-07!165;CL:0000037!4.89e-07!172;CL:0000566!4.89e-07!172;CL:0000839!9.04e-07!70 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.69e-13,108;CL:0000049,1.69e-13,108;CL:0000066,3.02e-12,253;CL:0000766,8.15e-10,72;CL:0000034,6.30e-09,441;CL:0002009,1.13e-08,61;CL:0000134,1.49e-08,354;CL:0002194,3.68e-08,59;CL:0000576,3.68e-08,59;CL:0000040,3.68e-08,59;CL:0000559,3.68e-08,59;CL:0000723,5.57e-08,433;CL:0000048,7.43e-08,427;CL:0000557,2.01e-07,67;CL:0002320,3.64e-07,361;CL:0000219,4.08e-07,386;CL:0002032,6.81e-07,161;CL:0000837,6.81e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!7.39e-23!239;DOID:162!3.77e-22!235;DOID:305!3.44e-13!106;DOID:0050686!2.00e-12!137;DOID:0050687!2.65e-11!143;DOID:8692!1.52e-08!31;DOID:1240!3.16e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.95e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.39e-23,239;DOID:162,3.77e-22,235;DOID:305,3.44e-13,106;DOID:0050686,2.00e-12,137;DOID:0050687,2.65e-11,143;DOID:8692,1.52e-08,31;DOID:1240,3.16e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001474!3.29e-08!86;UBERON:0002384!1.03e-07!375;UBERON:0002371!6.67e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.02e-07,82;UBERON:0002384,1.73e-07,371;UBERON:0004765,5.73e-07,90 | |||
|phase1_expression=68.1293922264587,41.9637026826327,69.6314756234098,44.0322512753774,37.5447319318922,80.2551442172339,35.4619829435635,70.7526258238051,33.4317604095793,50.8669248558123,15.3516256953934,35.3875022850879,41.1476486036388,28.5900275337708,21.5408294223145,44.3734596658172,33.1481990413187,37.245814609756,45.3777502875172,23.2698799765129,12.4440421658994,7.8363680369522,54.9573095291629,49.0010441760925,55.4898467009028,32.2464572256354,30.7056204542797,36.8366456548019,71.1989341096516,55.6552627240958,58.6753107367928,47.8099036729042,46.6869174106288,49.9167913725163,51.6706227870612,35.6844773543428,66.9409001683452,64.2634673896978,45.7241340231923,46.0063045917606,113.301229965402,91.9858011493902,106.893860568187,59.6132778996215,40.0548500310138,59.1905109298271,66.9395626288372,42.7614603542699,65.0383378879717,73.6492524344705,42.7788379903598,86.079531679445,55.5040545985956,40.0200503821972,60.9419189674538,65.8848188399116,46.9398578099495,88.3163293869183,67.9506241063404,48.139354061414,61.376364076708,67.6195165382768,43.2836137038941,60.0976898251099,63.2656140210313,34.0431134814684,56.6768246585973,62.5609176489291,47.9764284946585,71.8895075973936,53.8805557343698,48.6126479503585,65.824176587704,41.6172914034525,95.4593306843045,119.295769294266,40.7752931061777,106.775770810311,103.989454593011,21.9459812680761,76.1850873672515,104.483895953371,66.8785728953026,64.9904947401936,57.8181015011311,63.5828031624096,60.4597940424379,52.302472035858,60.1550834234225,63.9216015538694,34.1527781465669,35.2342313622563,37.0805031281472,46.2599650026591,33.0700052159106,58.7346509048422,30.0965948274165,23.1876350022007,39.0642848099068,19.8951929514907,19.5553359980154,38.8227200702481,50.6549493860569,27.5183828506379,30.9336202848579,49.6235923867311,52.535949570413,52.5174410875268,46.5612464264364,48.1803060488771,51.6774533259536,22.6046406873341,25.6535754270365,43.3416141505335,34.4967228556423,26.0611488204402,14.562378756873,44.6715679127419,48.5797808677445,50.3333354632073,53.3888432162263,41.8198899557285,42.6127586990097,40.3157825136418,74.9584359314075,51.3806636935517,62.4057277659995,30.4426182269346,27.5463401657013,26.0683926989038,21.9426179682566,69.0821885494745,77.7404376008664,39.7583067623023,39.1043570295994,36.6461692970884,129.631609369329,60.8293587878295,50.7651968171044,49.2239262366892,44.2687319893355,22.3974219101089,29.5079183516959,27.4380487660478,109.047924267974,105.870880277954,99.0536805865545,51.9909560985645,47.4755775947506,47.5465601701843,46.3116409164423,50.7538411112613,60.4024472797214,49.1817909473888,69.2174069746345,48.1456573395118,53.5027114334235,32.8189284145048,41.2688864716584,64.6010782635814,46.3253714675519,48.6574147659848,41.9786738982852,62.8703867391435,47.7983749250238,64.8316027342419,53.2134613124022,55.7426828392445,39.8623257411296,43.6662203401339,42.6860063357849,162.089913446358,186.134526791196,36.1958063278303,58.1457183483523,75.8516764870833,34.0291594689972,100.966490503582,59.9389565915223,42.6114976108153,57.6444576940407,57.7202063296154,46.0592332391654,45.6669178316243,59.6635946364124,40.5637906088416,42.0608424870399,20.6202860013741,34.6497685281656,59.3290694406227,42.7423226378151,34.8780460971982,30.9177323743131,32.7250379616239,31.4397423732536,37.3416324627775,16.6354507692982,45.144108576718,41.7881110480761,28.2150022200788,9.3420358436111,46.1240952234141,35.1583040840219,41.5596173226274,38.6300306375137,38.6174622706765,38.4609430800888,101.635236111379,52.2023839854588,53.3893472046419,69.5136635803363,73.2222274445942,49.1560564467354,25.2487729244717,59.3712771697772,82.0252974692554,51.7390497405965,25.7482449728997,48.3261967872072,43.4827892842604,67.4518225781567,47.6557424616738,73.7588576550621,63.0030381312348,75.823421524252,68.5462982979719,94.651595956566,85.746760104001,86.9130692663998,69.7638900253443,84.2751641924599,85.0397246646684,31.2899064659632,37.3079744151873,41.4404764057442,66.868981636605,52.6972021618797,55.1309688185673,54.9586089654612,67.7240993972584,56.8013959571829,53.5983432467319,67.1475852084403,61.0785825965545,67.500184003119,80.4121558017956,38.3840836404817,19.6338483324824,32.1027728838492,7.3504355692771,44.3642621876408,70.7635596007891,59.0789906681404,32.6682693566841,67.8896180757987,57.9899198809016,50.9241324296023,73.0611396174527,60.8200283090367,83.1444237523596,24.4356228982744,20.7986957055916,51.9592831290984,50.5456565691335,46.8460690000928,78.6797140297852,68.0588703487618,62.022853628479,25.2865407346968,31.7639879975103,124.83202208631,110.216008880581,107.906223821617,124.665999202413,78.1116896124697,72.7306248853443,50.4214482817036,72.9491185670044,31.4373796915473,84.7380769181023,45.3449435168114,34.8311234108497,36.6064681679082,36.7365481270766,52.0047754252864,39.7267962580609,31.6487107467127,54.7431827272657,53.1618137276183,57.9662101638761,46.5897085187842,41.7127633764742,40.5442864014951,71.4314903896053,75.6239537183,10.7296933755565,51.563467905916,71.803291477915,50.9636440865694,24.1774931806414,29.7883177248884,23.7115739324328,70.774106860783,27.6737018749636,36.2225748183538,56.6780960671099,51.8872245164117,102.161791608412,55.1634060019043,69.7226766880235,47.5871438026591,126.488731866838,107.985274657907,59.0335030552489,68.0534589596095,31.0127226752108,38.511964360994,61.8216179470563,39.8624065747744,63.7457029134028,66.1302349561811,33.1011677139238,28.6784674563158,27.7220958364256,39.3846667544818,42.9461517730152,27.0651084472193,26.9701187188302,19.7761013012481,210.470973729158,215.396250626898,229.586194443564,43.6781710520138,38.0129596005355,19.2598166826812,27.4521537220665,34.6152238266494,31.382780591753,34.6738588378431,34.0069092692322,56.8518760139962,31.0419213877515,64.4298830579373,38.9018945622994,52.1301686808497,6.2656370388077,10.9805895619474,55.000294948688,47.2414099792771,42.4775680057708,42.4378600024763,54.923695038464,43.2418119461443,66.4928924954322,39.1328031884559,53.325417942284,67.9137491055215,76.2443801109388,74.9579272529211,66.7881299002459,57.9828448697985,60.9036717824026,65.1268347189506,52.9639517767294,52.7595118208215,70.2193402127325,56.7433310958296,24.6777050348202,95.5256208729528,70.4692820185995,45.5001719909202,28.8767752260744,134.237732572995,22.7461433061288,26.3050604375869,154.105378183599,17.0600076106345,35.2093969922387,70.8204204815017,23.1340879035434,31.1588403175431,16.5557625372102,72.3848615447909,35.7362683839351,37.610958793326,8.55113518919145,14.6403852573944,50.2642245228123,40.3458014210638,50.433651172967,46.0593322065319,84.793324421786,115.348280888982,86.1398306994259,66.3061450957252,120.51294738312,29.291227642513,41.2850293867247,42.5205178991379,48.2428003695857,46.2981255382259,27.5531718437034,43.2099000999632,56.9805028139119,117.517574821655,86.4855303142978,41.729356985729,90.8396872082838,27.4258874085399,181.331911774449,45.307422560439,42.8166676444763,63.3444176077256,61.7652424373302,54.1146719783446,54.1012071884727,32.7499365036507,65.4905409167763,48.0388088688039,16.3774586439254,25.6763392820352,30.8657150488159,21.9785619255784,50.1844156657448,52.4365726795865,50.3058958016081,56.6110948405285,47.5530963519025,52.6573070298726,11.2155759990606,78.2320301716423,70.7855983270261,76.849450122696,51.3301717991977,30.5121914874656,60.0988224465275,68.9976534250868,64.0138292470494,31.2538788504011,36.0742113625648,56.0032640417063,54.2191121674563,50.7052084558035,54.0660797809274,63.6653785765025,50.2906182588563,63.1474694045664,39.6882354359609,34.2466688678298,20.4915513833486,16.0969971312692,92.084561878315,54.9647865939346,49.0009431875952,46.2246061813986,37.8844727950682,37.0637246468776,19.0674966020771,69.1467434622948,78.1469318217541,84.1100927856613,84.3077837017761,67.8960560054699,72.8111223362564,92.0832101893659,93.965470079432,62.6568889272474,57.578174337708,20.2120769605305,51.9485257879787,44.5927620301725,50.6384937547321,51.2221272108582,59.4659997278507,85.8191297161111,91.3480615531389,61.1736654072021,97.7112040226412,97.4366208053702,41.0822422259746,76.4597891372353,62.6586192725168,91.5868517906674,75.9581595240499,73.0514940031592,60.8960119897167,106.830162219043,126.890435659393,127.048029282892,137.817391054036,78.3506262562182,57.6300779963152,50.4658335685621,148.750623161791,59.286810303612,91.6415533071022,61.5692377943043,44.5384864986558,54.7335953090306,85.3656323565484,91.2077031248586,47.5101524628003,56.4232893582013,49.1457123358771,8.94732882989668,19.1310406318297,27.4932501406578,51.9132203814293,49.4033455019505,28.8909582964051,33.1540698637377,131.256961632078,58.0886116612239,34.2175759181773,52.5656903148455,63.4470559100128,32.4028326162853,56.7845330951828,27.0282931445198,45.5017875459186,80.0186329041386,14.5399911914283,21.2438944790639,9.98068990005971,23.438498497671,37.083039998387,31.8999813191309,55.9863765564658,54.1560275123592,21.0385036773463,53.0904794791856,49.28117966177,34.5513739917252,18.6005691020906,23.9986912864562,13.7323562685375,23.1110653256259,15.3684761855845,16.8926755808559,54.1424163689381,43.91847944776,27.9329438368783,132.058842726674,39.8875554591344,63.0996240200698,37.5919906850148,58.0582110712093,74.6520386225178,55.435616705938,70.5133757550582,59.0245764045293,71.4710232170673,60.6852327060216,47.2510707705752,67.4642779642888,69.4498661770517,72.9518897519938,101.068072908925,126.995124747817,99.3712092180604,91.9651718903887,35.8294295188262,34.7638228498123,36.6618086960175,30.2451551254234,47.0778607386176,42.186467600204,20.9617523569906,17.6567082405734,17.3355689836751,27.1857635931342,106.637217317989,65.0651417151369,31.1721678251019,41.1368434565457,14.0793470350025,56.4256156082398,26.9078920751942,63.2497967523208,39.8792323624311,64.2124394398468,45.5202731690477,59.7362148864794,259.563905979171,46.8720394784409,61.4401473706363,105.929781604942,84.6215487961513,27.4320869139987,82.7252816188476,73.825080773572,54.6708091804668,68.5664066394297,27.8358477321764,236.349907279838,30.0554385238108,86.4734544520998,48.2876506438265,15.637766601102,70.7896005499987,218.031991084172,31.5910432214242,51.1512600530253,151.150847594657,55.8938589289668,48.9045743906599,107.752988895136,27.8325679666569,69.058352142721,41.0430702342314,43.6193869122429,92.7163798314165,32.9403672487732,10.2071449080664,22.7262928960708,29.3817152554036,57.1588037088543,35.4897928277075,26.8111105221364,21.5410798570983,31.5864130813798,31.3496030783416,28.7581452251502,35.4842617332577,29.4935444216728,58.008281250327,68.7326102211978,93.2792878517528,100.712178941785,105.621353219508,95.9667944768801,56.6464591520098,8.74752658790234,25.8786471611994,88.4142316557605,78.3974788604233,64.8086927325529,96.0638516924907,64.2255622283098,15.8556342877444,43.2710747003053,42.0034419904726,29.4270239437339,132.739623004894,56.8340865685118,72.5439445867503,32.1612896868015,34.4287824590024,42.717114325998,72.2189470332438,73.4588267521078,81.9734273874617,63.4570015281184,161.886450917696,35.4407085313677,54.1631797466201,70.3450721654796,59.6281000104996,11.7647490289011,25.2564269328538,44.140404174157,123.342628905418,45.2778629287025,31.7552696301325,30.6536900956925,32.7469574395888,57.5049848823018,50.6657209264527,45.3222293016829,17.4085697078232,27.575888342497,19.6061169128615,27.5413009796236,110.880191952665,12.4049545195378,10.7383113113728,18.528257744562,13.7618206965617,31.2819925333923,20.6160057765393,38.1842232423997,76.238048856885,64.602524072742,57.6639973760834,80.4609103367747,27.631759442606,30.5783370368841,62.9855268182609,81.5659451366813,76.008403025858,51.8964234453744,42.7665432979378,57.8377294037748,56.981177030834,37.8077309408098,65.4390614453506,75.5539816447029,72.6393258266483,45.4301143285241,72.6630638180894,75.4765298270357,79.4866726528405,64.1746426028433,62.0563925158512,77.3034580702655,95.2077515698908,67.284003904947,54.9942052057541,77.9576716595869,74.8420270753398,57.203970346831,44.6414416737631,33.6749488765919,51.7358082737469,63.7571638648174,67.9779844658514,60.8116700278943,101.110842778473,106.963383137611,83.4552162367054,110.497814947278,79.6707733675308,57.0138528904638,35.5145183351221,94.5278787527483,106.602680052089,93.2719127660126,52.159981601411,60.7719912354764,16.7292707743594,34.6851349734111,42.9153434212163,45.6347449973805,21.9498598727096,79.3846495274513,64.6615097477399,31.398021149224,125.256090660921,48.9090542236717,38.5910848425448,72.1695324987216,54.8327670260222,62.8298032633303,7.03419042170084,18.977166805816,55.9866753006991,31.4523757993,37.8503541797476,28.4850392936255,21.8126945095844,32.9600501604214,48.654665649973,224.282802783565,43.2308204074154,45.8478726797889,61.5553409479932,14.5158048717999,7.08482881627925,20.1138662412011,12.3069818544453,6.04972070932123,13.7622932403794,15.5016619806577,15.704636228507,42.4979621109441,145.456668887764,70.2531532338031,60.0733463981759,46.9099977424616,91.1275102399333,62.6586099666265,40.7639979652974,96.8184329776896,69.5547469997452,53.952779063173,61.2506971487762,49.5317888827102,14.5205806929548,9.37293718336617,19.2218720746101,16.4881106504158,9.84554656232795,51.5362300845751,25.8029812762433,37.8123175373184,29.1298335018277,15.5353532404703,25.8938466108494,30.3482802118316,39.8408834864771,44.6172921918073,29.4999008142795,77.855556284588,17.2643121761153,11.4444625999357,85.572340799993,46.2722631871008,30.847785490252,14.2975186823562,100.337434466336,26.4816028947754,92.6329366327886,142.847754678228,24.2305484758865,45.8239474024907,58.3531955347989,81.3656714376072,41.6889909659731,30.4607761319664,44.0453670902391,32.4892041052623,50.3366009819725,45.4394882805371,47.8899334746466,34.2943510654652,56.3602896618363,65.7637537608358,102.242666470585,223.263441868393,75.6738301173523,121.796007057287,14.2434344181337,22.7911431220868,11.598144313382,25.7426826321344,16.1418229788853,21.6856344925891,29.8489427851697,55.3435801990904,72.4508005352378,30.041605869768,50.0088544539481,47.4274246293587,122.282497053996,15.1991959487421,64.5753739058455,13.5452842309312,33.5662432369607,13.9476390102522,63.0429595491801,50.7513157091209,32.2289439867886,44.6736966984432,77.6709632934611,248.437989687847,64.6745415514696,45.2808560712841,35.3221548221496,32.5380853753794,57.271077076126,13.530306547992,5.67255897442491,52.3736572110246,60.6351879611805,62.8558854938729,47.5889218336168,92.6061558289479,203.12469828051,63.4759490067299,206.119424908545,307.032798650129,361.790219468684,98.5280629419034,30.9177088730417,16.8817401998392,12.4375415918817,25.3410839861643,23.4557380091079,22.1399921261279,37.5907455245556,36.9965297203313,62.5695793199823,51.5541982053136,26.2752345645685,27.2145934871202,22.5873978716285,36.4374606808919,51.7834322935123,32.9333752980553,49.2489775096396,72.2544131592134,44.4066249259962,66.8299503673006,39.8889602085872,23.4703572831104,18.3103280242082,30.6248116125336,40.4560325117963,31.4157122457168 | |||
|short_description=p1@TXNDC12 | |||
}} |
Revision as of 18:32, 10 January 2014
Short description: | p1@TXNDC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TXNDC12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472624_5end |
EntrezGene: | TXNDC12 |
HGNC: | 24626 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.69e-13 | 108 |
common myeloid progenitor | 1.69e-13 | 108 |
epithelial cell | 3.02e-12 | 253 |
myeloid leukocyte | 8.15e-10 | 72 |
stem cell | 6.30e-09 | 441 |
macrophage dendritic cell progenitor | 1.13e-08 | 61 |
mesenchymal cell | 1.49e-08 | 354 |
monopoietic cell | 3.68e-08 | 59 |
monocyte | 3.68e-08 | 59 |
monoblast | 3.68e-08 | 59 |
promonocyte | 3.68e-08 | 59 |
somatic stem cell | 5.57e-08 | 433 |
multi fate stem cell | 7.43e-08 | 427 |
granulocyte monocyte progenitor cell | 2.01e-07 | 67 |
connective tissue cell | 3.64e-07 | 361 |
motile cell | 4.08e-07 | 386 |
hematopoietic oligopotent progenitor cell | 6.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.81e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.02e-07 | 82 |
connective tissue | 1.73e-07 | 371 |
skeletal element | 5.73e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.39e-23 | 239 |
cancer | 3.77e-22 | 235 |
carcinoma | 3.44e-13 | 106 |
organ system cancer | 2.00e-12 | 137 |
cell type cancer | 2.65e-11 | 143 |
myeloid leukemia | 1.52e-08 | 31 |
leukemia | 3.16e-08 | 39 |