FFCP PHASE1:Hg19::chr1:47407140..47407154,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2642 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000465874_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_CYP4A11_5end | |||
|id=chr1:47407140..47407154,- | |||
|ontology_enrichment_celltype=CL:0000181!5.10e-09!12;CL:0000417!5.10e-09!12;CL:0000668!5.10e-09!12;CL:0000414!5.10e-09!12;CL:0000412!5.10e-09!12;CL:0000182!5.10e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.61e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.61e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.59e-10;31!UBERON:0003918;4.19e-08;10!UBERON:0007687;4.19e-08;10!UBERON:0004161;1.37e-07;11 | |||
|ontology_enrichment_disease=DOID:178!3.85e-12!1;DOID:326!3.85e-12!1;DOID:3978!3.85e-12!1;DOID:3394!3.85e-12!1;DOID:5844!3.85e-12!1;DOID:3493!8.06e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.58e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0005057!3.82e-15!26;UBERON:0002107!8.45e-15!19;UBERON:0006925!8.45e-15!19;UBERON:0008836!8.45e-15!19;UBERON:0008835!9.00e-13!22;UBERON:0003894!9.00e-13!22;UBERON:0009854!3.26e-12!23;UBERON:0002146!3.45e-12!1;UBERON:0005623!3.45e-12!1;UBERON:0005172!4.05e-12!55;UBERON:0005173!4.05e-12!55;UBERON:0007499!3.14e-11!25;UBERON:0009497!3.14e-11!25;UBERON:0000015!3.14e-11!25;UBERON:0002423!3.14e-11!25;UBERON:0006235!3.14e-11!25;UBERON:0004161!3.14e-11!25;UBERON:0002417!7.72e-11!61;UBERON:0000916!7.72e-11!61;UBERON:0009856!8.57e-11!26;UBERON:0002365!4.93e-09!31;UBERON:0002330!4.93e-09!31;UBERON:0002368!5.51e-08!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.13e-24;19!UBERON:0006925;7.13e-24;19!UBERON:0002423;3.42e-18;25!UBERON:0002365;1.14e-14;31!UBERON:0002330;1.14e-14;31!UBERON:0002368;1.05e-12;33!UBERON:0005172;2.84e-12;52!UBERON:0005173;2.84e-12;52!UBERON:0000949;2.73e-09;43!UBERON:0002417;2.00e-08;58!UBERON:0000916;2.00e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.13e-24,19;UBERON:0006925,7.13e-24,19;UBERON:0008836,7.13e-24,19;UBERON:0008835,1.20e-20,22;UBERON:0003894,1.20e-20,22;UBERON:0009854,9.28e-20,23;UBERON:0007499,3.42e-18,25;UBERON:0009497,3.42e-18,25;UBERON:0000015,3.42e-18,25;UBERON:0002423,3.42e-18,25;UBERON:0006235,3.42e-18,25;UBERON:0004161,3.42e-18,25;UBERON:0009856,1.69e-17,26;UBERON:0005172,4.73e-16,54;UBERON:0005173,4.73e-16,54;UBERON:0002365,1.06e-14,31;UBERON:0002330,1.06e-14,31;UBERON:0002417,2.03e-14,60;UBERON:0000916,2.03e-14,60;UBERON:0002368,4.92e-13,35;UBERON:0000949,3.72e-10,45;UBERON:0003929,1.80e-08,54;UBERON:0005177,2.00e-08,101;UBERON:0002530,9.40e-08,59;UBERON:0009569,1.47e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.7698063473229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.9695642769506,10.8110993834539,14.1789577603537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6335905758507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.29907346130538,18.9885609048693,0,0,0,0,0,0,0,0,0,0,0,0,0,55.9829532650275,21.2011022259554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70685094975177,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CYP4A11 | |||
}} |
Revision as of 18:25, 10 January 2014
Short description: | p1@CYP4A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP4A11_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000465874_5end |
EntrezGene: | CYP4A11 |
HGNC: | 2642 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.61e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 7.13e-24 | 19 |
digestive gland | 7.13e-24 | 19 |
liver bud | 7.13e-24 | 19 |
hepatic diverticulum | 1.20e-20 | 22 |
liver primordium | 1.20e-20 | 22 |
digestive tract diverticulum | 9.28e-20 | 23 |
epithelial sac | 3.42e-18 | 25 |
epithelium of foregut-midgut junction | 3.42e-18 | 25 |
anatomical boundary | 3.42e-18 | 25 |
hepatobiliary system | 3.42e-18 | 25 |
foregut-midgut junction | 3.42e-18 | 25 |
septum transversum | 3.42e-18 | 25 |
sac | 1.69e-17 | 26 |
abdomen element | 4.73e-16 | 54 |
abdominal segment element | 4.73e-16 | 54 |
exocrine gland | 1.06e-14 | 31 |
exocrine system | 1.06e-14 | 31 |
abdominal segment of trunk | 2.03e-14 | 60 |
abdomen | 2.03e-14 | 60 |
endocrine gland | 4.92e-13 | 35 |
endocrine system | 3.72e-10 | 45 |
gut epithelium | 1.80e-08 | 54 |
trunk region element | 2.00e-08 | 101 |
gland | 9.40e-08 | 59 |
subdivision of trunk | 1.47e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.58e-10 | 2 |