FFCP PHASE1:Hg19::chr1:45478528..45478542,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7389 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12591 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001cnc.1_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_8_at_UROD_5end | |||
|id=chr1:45478528..45478542,+ | |||
|ontology_enrichment_celltype=CL:0000764!4.89e-07!2;CL:0000765!4.89e-07!2;CL:0000050!4.89e-07!2;CL:0000038!4.89e-07!2;CL:0000558!4.89e-07!2;CL:0000547!4.89e-07!2;CL:0000549!4.89e-07!2;CL:0000550!4.89e-07!2;CL:0000552!4.89e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.29e-26;2!CL:0000558;1.29e-26;2!CL:0002593;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.29e-26,2;CL:0000765,1.29e-26,2;CL:0000050,1.29e-26,2;CL:0000038,1.29e-26,2;CL:0000558,1.29e-26,2;CL:0000547,1.29e-26,2;CL:0000549,1.29e-26,2;CL:0000550,1.29e-26,2;CL:0000552,1.29e-26,2;CL:0002593,2.40e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.99e-16!8;DOID:8692!7.29e-14!31;DOID:1240!2.71e-10!39;DOID:2531!4.34e-07!51;DOID:0060083!4.34e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;8.07e-25;8!DOID:8692;1.93e-14;31!DOID:1240;2.22e-10;39!DOID:2531;1.19e-07;51!DOID:0060083;1.19e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.14e-25,8;DOID:8692,5.01e-14,31;DOID:1240,4.36e-11,39;DOID:2531,2.13e-08,51;DOID:0060083,2.13e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.13e-08!15;UBERON:0000179!3.13e-08!15;UBERON:0000463!3.13e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-13;15!UBERON:0000179;1.40e-13;15!UBERON:0000463;1.40e-13;15!UBERON:0002390;1.09e-09;32!UBERON:0002456;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.31e-13,15;UBERON:0000179,1.31e-13,15;UBERON:0000463,1.31e-13,15;UBERON:0002456,2.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.5483580596178,69.5418299726235,0,0,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,1.52234282769651,2.29391162142713,2.27858874869665,0.952927101831156,0,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,1.23087398947712,0.811367035427949,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,1.1279783030859,1.37243774022418,1.1747511088309,1.3282761290693,0.317873157960757,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,7.95041333473328,0,0,0,0,0.106787412567695,1.10043013569766,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,2.12711030312805,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.852935927603924,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@UROD | |||
}} |
Revision as of 18:19, 10 January 2014
Short description: | p8@UROD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_UROD_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_uc001cnc.1_5end |
EntrezGene: | UROD |
HGNC: | 12591 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.29e-26 | 2 |
erythroblast | 1.29e-26 | 2 |
megakaryocyte-erythroid progenitor cell | 1.29e-26 | 2 |
erythroid progenitor cell | 1.29e-26 | 2 |
reticulocyte | 1.29e-26 | 2 |
proerythroblast | 1.29e-26 | 2 |
basophilic erythroblast | 1.29e-26 | 2 |
polychromatophilic erythroblast | 1.29e-26 | 2 |
orthochromatic erythroblast | 1.29e-26 | 2 |
smooth muscle cell of the internal thoracic artery | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.31e-13 | 15 |
haemolymphatic fluid | 1.31e-13 | 15 |
organism substance | 1.31e-13 | 15 |
internal thoracic artery | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.14e-25 | 8 |
myeloid leukemia | 5.01e-14 | 31 |
leukemia | 4.36e-11 | 39 |
hematologic cancer | 2.13e-08 | 51 |
immune system cancer | 2.13e-08 | 51 |