FFCP PHASE1:Hg19::chr1:32169580..32169599,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2193 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=61bp_to_ENST00000532877_5end | |||
|coexpression_cluster_id=C2580 | |||
|description=CAGE_peak_2_at_COL16A1_5end | |||
|id=chr1:32169580..32169599,- | |||
|ontology_enrichment_celltype=CL:0000055!9.94e-35!180;CL:0000057!6.17e-24!75;CL:0000680!6.20e-16!57;CL:0000056!6.20e-16!57;CL:0000355!6.20e-16!57;CL:0000183!2.29e-15!59;CL:0000187!2.96e-15!54;CL:0000393!3.36e-12!60;CL:0000211!3.36e-12!60;CL:0000192!3.86e-12!42;CL:0000514!3.86e-12!42;CL:0002620!2.12e-09!23;CL:0000359!1.26e-08!32;CL:0002334!4.14e-08!12;CL:0000136!1.66e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.66e-10;73!CL:0002620;8.02e-10;23!CL:0000187;2.59e-09;55!CL:0000192;2.90e-09;43!CL:0002334;1.71e-08;12!CL:0000359;2.95e-08;32!CL:0002320;4.13e-07;188!CL:0000393;9.33e-07;61!CL:0000211;9.33e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.79e-26,76;CL:0000680,8.73e-17,58;CL:0000056,8.73e-17,58;CL:0000355,8.73e-17,58;CL:0000187,4.57e-16,55;CL:0000192,8.88e-13,43;CL:0000514,8.88e-13,43;CL:0000393,1.98e-12,61;CL:0000211,1.98e-12,61;CL:0002620,6.71e-10,23;CL:0000359,1.21e-08,32;CL:0002334,1.82e-08,12;CL:0000136,7.85e-08,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.90e-09;43!CL:0000355;3.89e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.41e-27!365;UBERON:0000914!2.01e-22!83;UBERON:0002329!2.01e-22!83;UBERON:0003077!2.01e-22!83;UBERON:0003059!2.01e-22!83;UBERON:0007282!2.01e-22!83;UBERON:0009618!2.01e-22!83;UBERON:0007285!2.01e-22!83;UBERON:0004290!1.39e-19!70;UBERON:0000486!2.37e-18!82;UBERON:0002385!2.25e-17!63;UBERON:0001015!2.25e-17!63;UBERON:0000383!2.25e-17!63;UBERON:0001134!7.27e-17!61;UBERON:0002036!7.27e-17!61;UBERON:0003082!7.27e-17!61;UBERON:0000481!1.34e-16!347;UBERON:0003102!2.62e-16!95;UBERON:0000468!6.71e-15!659;UBERON:0005256!5.85e-13!143;UBERON:0000119!2.80e-11!312;UBERON:0000483!9.58e-11!309;UBERON:0000479!1.09e-10!787;UBERON:0002199!2.20e-10!45;UBERON:0002416!2.20e-10!45;UBERON:0002100!3.03e-10!216;UBERON:0000467!2.06e-09!625;UBERON:0000033!2.29e-09!123;UBERON:0000480!3.09e-09!626;UBERON:0000924!3.28e-09!173;UBERON:0006601!3.28e-09!173;UBERON:0000153!3.44e-09!129;UBERON:0007811!3.44e-09!129;UBERON:0007023!4.29e-09!115;UBERON:0004121!5.99e-09!169;UBERON:0000922!1.57e-08!612;UBERON:0002097!1.59e-08!40;UBERON:0002050!3.46e-08!605;UBERON:0005423!3.46e-08!605;UBERON:0000477!4.62e-08!286;UBERON:0001013!5.02e-08!14;UBERON:0000923!6.94e-08!604;UBERON:0005291!6.94e-08!604;UBERON:0006598!6.94e-08!604;UBERON:0002532!6.94e-08!604;UBERON:0003104!4.12e-07!238;UBERON:0009142!4.12e-07!238;UBERON:0004111!4.53e-07!241;UBERON:0004872!9.91e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.54e-10;31!UBERON:0001015;5.54e-10;31!UBERON:0000383;5.54e-10;31!UBERON:0001013;2.22e-08;14!UBERON:0002384;3.93e-08;198!UBERON:0003102;1.68e-07;50!UBERON:0002199;2.10e-07;46!UBERON:0002416;2.10e-07;46!UBERON:0002097;4.88e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.78e-21,73;UBERON:0003077,6.95e-21,72;UBERON:0007285,6.95e-21,72;UBERON:0002329,1.22e-20,71;UBERON:0003059,1.22e-20,71;UBERON:0007282,1.22e-20,71;UBERON:0004290,1.22e-20,71;UBERON:0009618,1.22e-20,71;UBERON:0000486,4.03e-19,83;UBERON:0002385,2.63e-18,64;UBERON:0001015,2.63e-18,64;UBERON:0000383,2.63e-18,64;UBERON:0001134,9.07e-18,62;UBERON:0002036,9.07e-18,62;UBERON:0003082,9.07e-18,62;UBERON:0007503,3.62e-17,78;UBERON:0003102,5.12e-15,99;UBERON:0000479,4.18e-14,773;UBERON:0005256,1.56e-11,122;UBERON:0010314,1.91e-11,132;UBERON:0003104,3.07e-11,160;UBERON:0009142,3.07e-11,160;UBERON:0002199,7.54e-11,46;UBERON:0002416,7.54e-11,46;UBERON:0000119,1.77e-10,309;UBERON:0000483,6.00e-10,306;UBERON:0007023,6.15e-09,114;UBERON:0002097,6.69e-09,41;UBERON:0004121,6.99e-09,171;UBERON:0000924,6.99e-09,171;UBERON:0006601,6.99e-09,171;UBERON:0000923,8.23e-09,560;UBERON:0010316,8.23e-09,560;UBERON:0005291,8.23e-09,560;UBERON:0006598,8.23e-09,560;UBERON:0010317,8.23e-09,560;UBERON:0002532,8.23e-09,560;UBERON:0002050,1.13e-08,564;UBERON:0001013,2.23e-08,14;UBERON:0005423,5.63e-07,581;UBERON:0004573,7.46e-07,33;UBERON:0004571,7.46e-07,33;UBERON:0002100,8.09e-07,199 | |||
|phase1_expression=82.4819841888327,47.9585173515802,87.2507761354061,78.0571727154417,114.869001267813,54.9573270183232,32.9289841618804,15.7929968356708,24.5514490507848,1.96587149201207,1.39560233594486,1.74753097704138,4.48403862988371,12.2528689430446,15.2442792834841,20.842079540005,19.8889194247912,19.7183724404591,19.0293791528298,4.062994916534,9.79203317972414,7.8363680369522,0.572471974262113,0.410623275218653,2.25976751270645,0,0,0,0,0,0,1.83884244895785,3.0120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,11.4019146149618,16.877858163346,47.3485289623782,75.7020245060193,37.0807088539709,36.5831535643506,60.3427239175268,1.22895262313288,1.33037638477538,1.05401742831751,10.0853888133239,8.01449634243593,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0.183201743930407,0,0,6.54141078213801,82.4973439814229,35.2032822427532,72.2954127240175,278.518358747098,33.3388279266456,17.9416832045538,34.1596786335056,22.4467469059616,6.84664277879486,4.84958419450877,2.7788523529288,55.8508908009797,62.8031757683199,15.4652145010306,14.6715236110251,6.84566185853339,12.8525865274549,6.6937664226946,7.76990132967031,7.86524517532592,17.148950385411,8.84407084644729,25.3148163880625,45.144108576718,56.6241268047895,7.28129089550421,11.4978902690598,11.6151918628306,9.13365195065338,11.0825646193673,20.6319481813994,39.2304378622745,49.4283213802703,3.85669422744072,46.6413052791041,57.8740523698318,22.6767134240731,77.7235938858602,30.0913385376242,95.842280896974,42.8068769562657,71.8987175347794,48.3287545599545,64.3706124322492,43.5396020578076,29.9045205114802,45.08621824961,9.26919303694291,13.90396856946,1.93260853163297,1.36373060295417,1.43402297694502,0.121973706129595,0.265059536642971,0.348581828608555,1.0366105501537,0,0,71.9667848717153,110.637441369176,24.8642858434465,32.9701228902705,23.1001434134267,0,0,0,0,0,0,0,0,0,0,0,23.4597186458898,76.4445299204818,0,0,0.590789906681404,0,0,1.02940686179115,2.85350742062426,1.1240175325762,0.301586917234893,1.94435734832912,42.3550796903422,19.758760920312,0,1.27523445472584,4.93116515790451,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.850650583454319,3.40322386270824,4.65014301622339,3.4504441124869,0,0,0.621984346622316,0.288239906833923,0.75745460055828,0.253991577168676,0,0,6.84289784090821,1.33675740514321,0,0,12.7829436153711,19.6182030974976,6.23375429478075,60.2406195431244,71.5312891703765,16.060752298564,11.1694008965646,6.24044621468197,11.8315392160585,0,3.72991050622539,7.29187767656553,32.5572963234866,9.05564370458846,15.3096006618055,6.04166312862328,6.33561498346743,0.602878754119172,2.61460037580088,0.799783929456456,0,0,0,24.4417352601414,81.5519744422209,11.4109524032575,11.7272858400739,12.7395319981238,9.13210912523467,0,0,0,0,0.76228387266739,1.30139853857622,0,0.502548796003046,0,0,0,0,19.6306386750624,15.0051156317903,5.69656549769445,25.1644742452277,30.5113570843147,40.8449254937891,30.4567678981054,10.8340595901979,22.7407504055985,62.083842775503,21.255219153134,8.84972009000175,21.8946708459569,166.039381528404,164.022556581589,0,0,0,0.303127571446259,8.32177197552485,5.74541557326393,107.43068078553,170.035866403173,101.037633995906,66.8886359114759,90.0604758357398,64.0198606151558,80.1457558802951,19.5846311129373,39.4187030195142,13.3045992742371,22.3279404548957,19.2909228243532,0,2.00506470303285,0.552485933615378,26.2925086296949,28.952495713068,25.5692609170877,0,0,0.784349769176855,0,0.211103257785751,0,0,0,0,1.08378575017541,0.501689773854853,0,0.831076008928724,0,0,0,0,0.656029291399411,0.650756789328606,4.73988653579522,0,0,2.87132768998086,3.25030123018261,33.7436252672735,13.7272419974813,5.85384745035649,10.2847462066507,10.0620697913707,17.9391808930017,20.5923705358205,10.7385550544287,34.5444298309341,0.826424576804891,1.15314040419064,3.82838137483752,0.809262246844399,1.85938219718914,84.3697089506115,20.911118104818,34.807794559898,6.38767236380426,32.1875207067777,22.2389062924704,10.3049918454234,37.2158369359667,7.2767267685307,0.38126038784765,19.4482321396614,30.3836681504084,8.59148769400029,21.9785619255784,22.1243122827477,16.7467588138993,18.8499843753098,6.06547444719948,6.34041284692033,11.3739783184525,44.8623039962423,34.1198885483798,14.7910205459458,17.1989888374062,38.1794666275024,24.8617856564534,23.7087097724833,19.9031692572366,7.0152141640602,22.5722458364008,23.6122110736788,7.50768394762005,6.196469961995,7.60578126837052,2.86822704408103,5.20719917369542,7.49009208110625,8.86902660176495,35.6771903653052,53.675067552464,23.90680994724,15.3971276907792,2.11688647996127,4.02181365321472,2.17781969722645,4.9896214411693,1.29151611801369,5.05414427002877,2.21715076768338,2.52695740227655,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,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| |||
|short_description=p2@COL16A1 | |||
}} |
Revision as of 17:34, 10 January 2014
Short description: | p2@COL16A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL16A1_5end |
Coexpression cluster: | C2580_Fibroblast_Preadipocyte_Pericytes_Adipocyte_Hair_Ewing_Mesenchymal |
Association with transcript: | 61bp_to_ENST00000532877_5end |
EntrezGene: | COL16A1 |
HGNC: | 2193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.79e-26 | 76 |
muscle precursor cell | 8.73e-17 | 58 |
myoblast | 8.73e-17 | 58 |
multi-potent skeletal muscle stem cell | 8.73e-17 | 58 |
muscle cell | 4.57e-16 | 55 |
smooth muscle cell | 8.88e-13 | 43 |
smooth muscle myoblast | 8.88e-13 | 43 |
electrically responsive cell | 1.98e-12 | 61 |
electrically active cell | 1.98e-12 | 61 |
skin fibroblast | 6.71e-10 | 23 |
vascular associated smooth muscle cell | 1.21e-08 | 32 |
preadipocyte | 1.82e-08 | 12 |
fat cell | 7.85e-08 | 15 |