FFCP PHASE1:Hg19::chr1:12248850..12248869,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7133 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11917 | |||
|TSSclassifier=strong | |||
|UniProt=P20333 | |||
|association_with_transcript=-13bp_to_S63368_5end | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_2_at_TNFRSF1B_5end | |||
|id=chr1:12248850..12248869,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.75e-42!140;CL:0002032!1.08e-38!165;CL:0000837!1.08e-38!165;CL:0000037!1.16e-38!172;CL:0000566!1.16e-38!172;CL:0000766!1.45e-38!76;CL:0000988!7.92e-38!182;CL:0002087!5.87e-37!119;CL:0002057!6.36e-37!42;CL:0002194!3.50e-35!63;CL:0000576!3.50e-35!63;CL:0000040!3.50e-35!63;CL:0000559!3.50e-35!63;CL:0002009!5.21e-35!65;CL:0000763!8.53e-35!112;CL:0000049!8.53e-35!112;CL:0000860!4.28e-33!45;CL:0002031!1.14e-32!124;CL:0000557!4.13e-31!71;CL:0000839!2.22e-30!70;CL:0000134!7.00e-11!358;CL:0002320!8.23e-11!365;CL:0000048!1.92e-08!430;CL:0000094!4.68e-08!8;CL:0000723!8.57e-08!436;CL:0000219!2.26e-07!390;CL:0000034!2.48e-07!444;CL:0002393!7.68e-07!9;CL:0002397!7.68e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-69;33!CL:0002057;1.89e-69;33!CL:0000473;5.30e-60;39!CL:0000234;5.30e-60;39!CL:0000576;9.54e-54;48!CL:0000766;1.82e-40;69!CL:0000763;2.72e-20;100!CL:0000094;1.28e-17;8!CL:0002087;1.02e-15;104!CL:0000738;3.20e-14;136!CL:0000081;2.13e-12;11!CL:0000988;1.28e-09;177!CL:0000775;3.19e-08;3!CL:0000875;6.23e-08;3!CL:0002396;6.23e-08;3!CL:0002619;2.91e-07;3!CL:0000219;2.95e-07;193!CL:0000767;6.45e-07;3!CL:0000453;6.58e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.70e-91,48;CL:0000234,6.70e-91,48;CL:0000766,1.63e-89,72;CL:0000860,7.57e-87,42;CL:0002057,7.57e-87,42;CL:0002009,1.06e-80,61;CL:0002194,2.29e-80,59;CL:0000576,2.29e-80,59;CL:0000040,2.29e-80,59;CL:0000559,2.29e-80,59;CL:0000557,2.58e-72,67;CL:0000839,1.72e-70,66;CL:0000763,6.48e-64,108;CL:0000049,6.48e-64,108;CL:0000738,3.84e-61,136;CL:0002087,1.74e-47,115;CL:0000037,2.93e-46,168;CL:0002032,1.70e-45,161;CL:0000837,1.70e-45,161;CL:0000988,1.31e-44,177;CL:0002031,6.10e-43,120;CL:0000094,1.20e-17,8;CL:0002320,1.39e-14,361;CL:0000134,1.73e-14,354;CL:0000081,2.03e-12,11;CL:0002393,2.55e-12,9;CL:0002397,2.55e-12,9;CL:0000219,9.20e-12,386;CL:0000048,3.33e-09,427;CL:0000034,6.51e-09,441;CL:0000723,7.44e-09,433;CL:0000775,2.90e-08,3;CL:0000875,6.39e-08,3;CL:0002396,6.39e-08,3;CL:0002619,2.38e-07,3;CL:0000453,3.66e-07,5;CL:0000767,6.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-61;42!CL:0000049;9.03e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.71e-35!102;UBERON:0003061!8.71e-35!102;UBERON:0002193!7.86e-34!112;UBERON:0002371!4.04e-26!80;UBERON:0001474!1.33e-23!86;UBERON:0002405!6.19e-22!115;UBERON:0004765!1.62e-19!101;UBERON:0001434!1.62e-19!101;UBERON:0003081!1.73e-12!216;UBERON:0002204!1.44e-11!167;UBERON:0002384!3.27e-10!375;UBERON:0000178!9.78e-07!15;UBERON:0000179!9.78e-07!15;UBERON:0000463!9.78e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.98e-08;15!UBERON:0000179;2.98e-08;15!UBERON:0000463;2.98e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.08e-63,98;UBERON:0003061,1.08e-63,98;UBERON:0002371,3.45e-62,76;UBERON:0001474,1.16e-56,82;UBERON:0002193,2.15e-56,108;UBERON:0004765,1.96e-50,90;UBERON:0002405,2.26e-48,93;UBERON:0001434,4.83e-44,100;UBERON:0003081,4.17e-25,203;UBERON:0002204,4.27e-22,167;UBERON:0002384,2.04e-14,371;UBERON:0000926,1.61e-11,315;UBERON:0004120,1.61e-11,315;UBERON:0006603,1.61e-11,315;UBERON:0000178,3.27e-08,15;UBERON:0000179,3.27e-08,15;UBERON:0000463,3.27e-08,15 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0.125542639594803,0.458480434487708,0.0821005894499457,0.472264687882075,2.36018566109342,1.15148819429164,1.54816123316076,0,0,0,0,0,0,0,3.40925560699241,0.868043482863407,5.37397138175818,1.94336199611388,2.06060454107349,16.2846027433112,10.5805264232867,7.76268995801012,19.7564681369832,12.7462045286766,6.19412741790207,18.9876978932619,10.246428261164,8.51336027598907,8.96338769915208,3.87290810150296,2.70852973188684,23.342050103283,10.9162460023138,7.86532195557796,27.8536342057521,8.98601275813062,17.2621023965741,14.8433085084022,9.3747919082167,9.37694451171927,22.346111374401,16.4541715160431,16.8162007228805,14.5724225848911,11.9941071236646,7.60160956467908,15.7403870684676,5.15588690382591,8.22802207346299,5.49263744411049,9.56719349842696,5.2414661377094,5.05478840159228,2.70318407114711,3.69668849403284,5.70025487482497,10.1447505371536,3.10529061399878,0,0.546138611262131,0.889509253863555,0,0.800791974072025,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,1.12101712596307,0,0,1.17903228824749,0.411202997999018,3.67810289859492,0.32592226663359,0.946895611469467,0,6.01616467179937,0.883817722424512,2.21533894583621,1.62482318259009,10.7596708569567,7.41338281091306,1.31550323682941,0.552700035571697,0.869409257205157,0.444859689486181,0,0,2.03956816855619,0.766440987203842,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0.903450714466637,0.76791966692651,0,1.18388626022008,0,0,1.06976078313403,0.579297615531196,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.930705723632056,0.238490624305342,0,0,0,0,0,0,0,0.550236083880135,0,0,0.71153252537342,0,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0,0.337834441449967,0,0,0.183201743930407,5.27121669744253,7.75560528296651,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,2.21595305478658,0.936017060556951,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.4400297149257,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,1.06617584622764,0,0,0,0,2.43247561282381,4.01805673145701,12.6500363689819,0,0,0,0,0,0,0.448340575974109,0.788123040807709,2.37190332345469,0.898401253958239,0,0,0,0,0,5.24304916763028,38.8909896965232,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,1.37257369524342,0.413536052245775,4.74571241800957,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.348631135379878,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0.255897791311334,0.855877976067841,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.422215270595328,0,0.379473173765715,0,0,0,0,0.470719003883896,0,0,0,0,2.02979043692868,0,5.12682468456746,1.19115887728894,0.822724546172388,0.648473311192717,1.08006287447623,3.96562588147135,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0.561594356226918,0.228234679033192,0.156679895773023,0,0.338583555603207,0.1605880751037,0.403599414382095,0.425846237690326,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,1.17206543417515,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0.511572370226872,0.295930216910801,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.179515288819544,0,0,0.0915975934018623,0,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0.313265848516366,0,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0.415440338029185,1.799791132412,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0.258565912723101,0.13223260174269,0,0,0.747511887973863,0.157204305099666,0.828478110694391,0.992332043623902,0.395223263795889,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.1554372005827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| |||
|short_description=p2@TNFRSF1B | |||
}} |
Revision as of 16:24, 10 January 2014
Short description: | p2@TNFRSF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF1B_5end |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | -13bp_to_S63368_5end |
EntrezGene: | TNFRSF1B |
HGNC: | 11917 |
UniProt: | P20333 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.08e-63 | 98 |
blood island | 1.08e-63 | 98 |
bone marrow | 3.45e-62 | 76 |
bone element | 1.16e-56 | 82 |
hemolymphoid system | 2.15e-56 | 108 |
skeletal element | 1.96e-50 | 90 |
immune system | 2.26e-48 | 93 |
skeletal system | 4.83e-44 | 100 |
lateral plate mesoderm | 4.17e-25 | 203 |
musculoskeletal system | 4.27e-22 | 167 |
connective tissue | 2.04e-14 | 371 |
mesoderm | 1.61e-11 | 315 |
mesoderm-derived structure | 1.61e-11 | 315 |
presumptive mesoderm | 1.61e-11 | 315 |
blood | 3.27e-08 | 15 |
haemolymphatic fluid | 3.27e-08 | 15 |
organism substance | 3.27e-08 | 15 |