FFCP PHASE1:Hg19::chr1:11751540..11751553,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10459 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6764 | |||
|TSSclassifier=strong | |||
|UniProt=B1AK44 | |||
|association_with_transcript=-6bp_to_ENST00000376672_5end | |||
|description=CAGE_peak_6_at_MAD2L2_5end | |||
|id=chr1:11751540..11751553,- | |||
|ontology_enrichment_celltype=CL:0002319!2.44e-18!25;CL:0000133!2.18e-15!59;CL:0000047!3.44e-14!8;CL:0000221!1.87e-11!71;CL:0000540!3.93e-11!6;CL:0000031!3.93e-11!6;CL:0000404!3.93e-11!6;CL:0002322!5.19e-10!5;CL:0000095!3.73e-08!17;CL:0000123!3.73e-08!17;CL:0000333!9.63e-08!41;CL:0000128!1.02e-07!7;CL:0000126!1.02e-07!7;CL:0000127!1.02e-07!7;CL:0002453!1.02e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.44e-27;6!CL:0000404;1.44e-27;6!CL:0002322;2.20e-24;5!CL:0002319;8.93e-16;25!CL:0000123;2.63e-11;2!CL:0000242;2.63e-11;2!CL:0002321;4.03e-11;15!CL:0000039;5.82e-11;7!CL:0000586;5.82e-11;7!CL:0000064;7.53e-07;3!CL:0000067;7.53e-07;3!CL:0005012;7.53e-07;3!CL:0002304;7.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.45e-28,8;CL:0000540,1.38e-27,6;CL:0000031,1.38e-27,6;CL:0000404,1.38e-27,6;CL:0002322,1.57e-24,5;CL:0000133,3.66e-16,59;CL:0002319,9.63e-16,25;CL:0000221,1.07e-12,72;CL:0000242,2.70e-11,2;CL:0000039,6.30e-11,7;CL:0000586,6.30e-11,7;CL:0000064,8.25e-07,3;CL:0000067,8.25e-07,3;CL:0005012,8.25e-07,3;CL:0002304,8.25e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;1.44e-27;6!UBERON:0009117;1.84e-11;10!UBERON:0005564;1.84e-11;10!CL:0000133;3.84e-08;59 | |||
|ontology_enrichment_disease=DOID:3095!5.78e-10!22;DOID:2994!5.78e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.69e-09;22!DOID:2994;1.69e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.97e-09,22;DOID:2994,1.97e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.46e-25!82;UBERON:0000073!3.14e-25!94;UBERON:0001016!3.14e-25!94;UBERON:0005743!8.91e-24!86;UBERON:0000955!4.27e-19!69;UBERON:0006238!4.27e-19!69;UBERON:0001893!6.19e-19!34;UBERON:0001869!1.44e-18!32;UBERON:0002791!5.96e-18!33;UBERON:0002780!1.08e-17!41;UBERON:0001890!1.08e-17!41;UBERON:0006240!1.08e-17!41;UBERON:0002616!2.97e-17!59;UBERON:0003080!4.20e-17!42;UBERON:0003056!4.55e-17!61;UBERON:0001049!8.53e-17!57;UBERON:0005068!8.53e-17!57;UBERON:0006241!8.53e-17!57;UBERON:0007135!8.53e-17!57;UBERON:0002020!1.60e-15!34;UBERON:0003528!1.60e-15!34;UBERON:0000924!3.77e-15!173;UBERON:0006601!3.77e-15!173;UBERON:0002346!3.97e-15!90;UBERON:0000956!1.09e-14!25;UBERON:0000203!1.09e-14!25;UBERON:0004121!2.71e-14!169;UBERON:0003075!3.25e-14!86;UBERON:0007284!3.25e-14!86;UBERON:0000153!9.88e-13!129;UBERON:0007811!9.88e-13!129;UBERON:0000033!1.77e-12!123;UBERON:0002619!2.42e-11!22;UBERON:0001950!6.14e-11!20;UBERON:0000488!2.03e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.51e-12;49!UBERON:0000473;1.33e-09;8!UBERON:0003135;5.34e-07;11!UBERON:0001778;7.53e-07;3!UBERON:0001775;7.53e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.43e-09,8;UBERON:0003135,5.60e-07,11;UBERON:0001778,8.25e-07,3;UBERON:0001775,8.25e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0.408001382488506,0,0.286235987131057,0.958120975510189,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,1.41802225746102,1.55210578223795,0.966182642624386,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90315859614705,4.90360142789496,5.34492137199785,2.48786532036889,3.78481276313443,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.857839051492628,0,0,0,0,0,0,0,2.20267769452646,0,0.433099343283221,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0.76228387266739,5.20559415430487,3.86644406388848,1.67516265334349,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.601519410909855,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.267096106940212,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.22334513965736,0,0.159426272728822,0,0,0,0,0,5.24939761776342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0.63337622438398,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,9.30807107751954,0,2.95162491386597,0,0.361789315876224,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0.391102765469606,0,0,0,0,0.343609788497747,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0.600420288709789,0.958337652243951,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.408610218334727,2.25054407851027,2.20063098555574,1.66176135211674,0,0,0.182248669974074,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0,0,0.18628920882415,0.276697269872462,0,0,0,0,11.708372645172,16.6659182902449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0,0,0,2.04630994085843,0.107824811396682,0.314531883711793,0.109209638192014,0,0.212574920101683,0.495743057036009,0,0,16.797551685267,0,0,0,0,0,0,0.205116364240755,2.26864526599546,0.207471757392654,0.322951291263702,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.317079050969534,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0.131545547125698,0,0,0,0.157115589916002,0,1.82631744101899,0,0,0,1.26410889386181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,2.33939463462106,6.76432635548652,0,0.90356865631168,1.97892930141772,3.32118255846682,0,0,0.940634592723046,0,0.942706188406504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.407948941145488,4.79985759374415,0.5290268405154,0,0,0,1.64016352285603,2.18531143927391,0,2.95767606251747,2.40495664739004,2.02168778976659,2.005660314339,0,0,0,0.517164979309476,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,1.05824249194267,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@MAD2L2 | |||
}} |
Revision as of 16:20, 10 January 2014
Short description: | p6@MAD2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MAD2L2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000376672_5end |
EntrezGene: | MAD2L2 |
HGNC: | 6764 |
UniProt: | B1AK44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.45e-28 | 8 |
neuron | 1.38e-27 | 6 |
neuroblast | 1.38e-27 | 6 |
electrically signaling cell | 1.38e-27 | 6 |
embryonic stem cell | 1.57e-24 | 5 |
neurectodermal cell | 3.66e-16 | 59 |
neural cell | 9.63e-16 | 25 |
ectodermal cell | 1.07e-12 | 72 |
Merkel cell | 2.70e-11 | 2 |
germ line cell | 6.30e-11 | 7 |
germ cell | 6.30e-11 | 7 |
ciliated cell | 8.25e-07 | 3 |
ciliated epithelial cell | 8.25e-07 | 3 |
multi-ciliated epithelial cell | 8.25e-07 | 3 |
non-pigmented ciliary epithelial cell | 8.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.43e-09 | 8 |
male reproductive organ | 5.60e-07 | 11 |
ciliary epithelium | 8.25e-07 | 3 |
ciliary body | 8.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.97e-09 | 22 |
germ cell cancer | 1.97e-09 | 22 |