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Coexpression cluster:C33: Difference between revisions

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{{Coexpression_clusters
{
|coexpression_dpi_cluster_scores_median=0,0,0,0,

Latest revision as of 10:13, 17 September 2013


Full id: C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen



Phase1 CAGE Peaks

Hg19::chr10:102822746..102822757,-p@chr10:102822746..102822757
-
Hg19::chr10:103210309..103210317,+p@chr10:103210309..103210317
+
Hg19::chr10:103210320..103210327,+p@chr10:103210320..103210327
+
Hg19::chr10:103210336..103210347,+p@chr10:103210336..103210347
+
Hg19::chr10:103210354..103210369,+p@chr10:103210354..103210369
+
Hg19::chr10:103210373..103210382,+p@chr10:103210373..103210382
+
Hg19::chr10:117184382..117184383,+p@chr10:117184382..117184383
+
Hg19::chr10:126738169..126738178,-p@chr10:126738169..126738178
-
Hg19::chr10:127505090..127505100,-p10@UROS
Hg19::chr10:127505167..127505200,-p4@UROS
Hg19::chr10:127505220..127505227,-p12@UROS
Hg19::chr10:46076251..46076291,-p@chr10:46076251..46076291
-
Hg19::chr10:52315129..52315145,-p@chr10:52315129..52315145
-
Hg19::chr10:52315156..52315181,-p@chr10:52315156..52315181
-
Hg19::chr10:5937091..5937096,+p@chr10:5937091..5937096
+
Hg19::chr10:71075516..71075537,+p3@HK1
Hg19::chr10:71075552..71075631,+p2@HK1
Hg19::chr10:86596455..86596456,+p@chr10:86596455..86596456
+
Hg19::chr10:91137806..91137820,+p1@IFIT1B
Hg19::chr10:94352941..94352954,+p4@KIF11
Hg19::chr10:94352956..94352967,+p5@KIF11
Hg19::chr10:94679592..94679594,-p@chr10:94679592..94679594
-
Hg19::chr11:100734169..100734170,+p@chr11:100734169..100734170
+
Hg19::chr11:100734221..100734230,+p@chr11:100734221..100734230
+
Hg19::chr11:10327173..10327182,+p15@ADM
Hg19::chr11:104459913..104459915,+p@chr11:104459913..104459915
+
Hg19::chr11:113560699..113560722,-p@chr11:113560699..113560722
-
Hg19::chr11:115492263..115492265,+p@chr11:115492263..115492265
+
Hg19::chr11:118958453..118958481,-p@chr11:118958453..118958481
-
Hg19::chr11:118958646..118958653,+p4@HMBS
Hg19::chr11:118958689..118958710,+p2@HMBS
Hg19::chr11:128133310..128133311,+p@chr11:128133310..128133311
+
Hg19::chr11:16403882..16403908,-p9@SOX6
Hg19::chr11:16403910..16403933,-p12@SOX6
Hg19::chr11:16626556..16626569,+p@chr11:16626556..16626569
+
Hg19::chr11:29581179..29581180,+p@chr11:29581179..29581180
+
Hg19::chr11:34460253..34460267,+p5@CAT
Hg19::chr11:5247692..5247701,-p@chr11:5247692..5247701
-
Hg19::chr11:5247730..5247736,-p@chr11:5247730..5247736
-
Hg19::chr11:5247798..5247808,-p8@HBB
Hg19::chr11:5248435..5248444,+p@chr11:5248435..5248444
+
Hg19::chr11:5254068..5254072,+p@chr11:5254068..5254072
+
Hg19::chr11:5255440..5255449,-p@chr11:5255440..5255449
-
Hg19::chr11:5255521..5255526,-p@chr11:5255521..5255526
-
Hg19::chr11:5255612..5255613,-p10@HBD
Hg19::chr11:5255696..5255724,-p1@HBD
Hg19::chr11:5255739..5255748,-p5@HBD
Hg19::chr11:5255755..5255802,-p2@HBD
Hg19::chr11:5255807..5255826,-p4@HBD
Hg19::chr11:5255854..5255860,-p6@HBD
Hg19::chr11:5255861..5255888,-p3@HBD
Hg19::chr11:5255903..5255912,-p7@HBD
Hg19::chr11:5264728..5264739,-p5@HBBP1
Hg19::chr11:5264740..5264781,-p3@HBBP1
Hg19::chr11:5276008..5276013,-p1@HBG2
Hg19::chr11:5297274..5297283,+p@chr11:5297274..5297283
+
Hg19::chr11:5302089..5302094,+p@chr11:5302089..5302094
+
Hg19::chr11:57148619..57148624,-p1@PRG3
Hg19::chr11:57415965..57415973,+p5@CLP1
Hg19::chr11:57416002..57416009,+p6@CLP1
Hg19::chr11:57416011..57416016,+p9@CLP1
Hg19::chr11:61687750..61687761,-p3@RAB3IL1
Hg19::chr11:64102824..64102834,+p@chr11:64102824..64102834
+
Hg19::chr11:65342637..65342647,-p@chr11:65342637..65342647
-
Hg19::chr11:66676050..66676060,+p@chr11:66676050..66676060
+
Hg19::chr11:75220351..75220380,+p@chr11:75220351..75220380
+
Hg19::chr11:84630568..84630573,+p@chr11:84630568..84630573
+
Hg19::chr12:101744596..101744599,+p@chr12:101744596..101744599
+
Hg19::chr12:116303853..116303855,+p@chr12:116303853..116303855
+
Hg19::chr12:131245491..131245492,+p@chr12:131245491..131245492
+
Hg19::chr12:131507832..131507835,+p@chr12:131507832..131507835
+
Hg19::chr12:23773763..23773766,-p@chr12:23773763..23773766
-
Hg19::chr12:48499121..48499142,+p8@PFKM
Hg19::chr12:49801773..49801776,-p@chr12:49801773..49801776
-
Hg19::chr12:54689532..54689551,-p4@NFE2
Hg19::chr12:54689552..54689574,-p6@NFE2
Hg19::chr12:70018044..70018079,+p@chr12:70018044..70018079
+
Hg19::chr12:75560876..75560881,+p@chr12:75560876..75560881
+
Hg19::chr12:77175362..77175373,+p@chr12:77175362..77175373
+
Hg19::chr12:8025766..8025779,-p10@SLC2A14
Hg19::chr13:106256314..106256318,+p@chr13:106256314..106256318
+
Hg19::chr13:20264882..20264884,+p@chr13:20264882..20264884
+
Hg19::chr13:23424018..23424020,+p1@RFESDP1
Hg19::chr13:23969126..23969130,+p@chr13:23969126..23969130
+
Hg19::chr13:25893368..25893395,+p@chr13:25893368..25893395
+
Hg19::chr13:30870209..30870213,+p1@PRDX2P1
Hg19::chr13:32749671..32749684,+p@chr13:32749671..32749684
+
Hg19::chr13:33576723..33576724,+p@chr13:33576723..33576724
+
Hg19::chr13:50656080..50656102,-p6@DLEU2
Hg19::chr13:78682773..78682778,+p@chr13:78682773..78682778
+
Hg19::chr14:102974842..102974864,-p5@ANKRD9
Hg19::chr14:24584508..24584542,+p3@DCAF11
Hg19::chr14:24891183..24891190,+p@chr14:24891183..24891190
+
Hg19::chr14:37641821..37641833,-p8@SLC25A21
Hg19::chr14:50046981..50046983,+p@chr14:50046981..50046983
+
Hg19::chr14:55799575..55799582,+p@chr14:55799575..55799582
+
Hg19::chr14:55799598..55799607,+p@chr14:55799598..55799607
+
Hg19::chr14:65232780..65232793,-p@chr14:65232780..65232793
-
Hg19::chr14:65232867..65232870,-p@chr14:65232867..65232870
-
Hg19::chr14:65232928..65232952,-p@chr14:65232928..65232952
-
Hg19::chr14:65233007..65233019,-p@chr14:65233007..65233019
-
Hg19::chr14:65233039..65233055,-p@chr14:65233039..65233055
-
Hg19::chr14:65233088..65233108,-p@chr14:65233088..65233108
-
Hg19::chr14:65233114..65233131,-p@chr14:65233114..65233131
-
Hg19::chr14:65233213..65233222,-p@chr14:65233213..65233222
-
Hg19::chr14:65233247..65233258,-p@chr14:65233247..65233258
-
Hg19::chr14:65233282..65233289,-p@chr14:65233282..65233289
-
Hg19::chr14:65258281..65258283,-p@chr14:65258281..65258283
-
Hg19::chr14:65346592..65346599,-p3@SPTB
Hg19::chr14:65346617..65346639,-p1@SPTB
Hg19::chr14:65346661..65346672,-p6@SPTB
Hg19::chr14:65346679..65346690,-p7@SPTB
Hg19::chr14:65347290..65347328,+p@chr14:65347290..65347328
+
Hg19::chr14:95140093..95140094,-p@chr14:95140093..95140094
-
Hg19::chr14:96001055..96001099,-p4@SNHG10
Hg19::chr14:96742091..96742094,-p@chr14:96742091..96742094
-
Hg19::chr15:102041968..102041976,-p@chr15:102041968..102041976
-
Hg19::chr15:43513093..43513102,-p4@EPB42
Hg19::chr15:43513106..43513122,-p3@EPB42
Hg19::chr15:43513130..43513135,-p5@EPB42
Hg19::chr15:43513152..43513168,-p2@EPB42
Hg19::chr15:43513187..43513251,-p1@EPB42
Hg19::chr15:65133307..65133312,+p@chr15:65133307..65133312
+
Hg19::chr15:65477916..65477928,-p6@CLPX
Hg19::chr15:66084586..66084597,-p4@DENND4A
Hg19::chr15:66097392..66097419,-p@chr15:66097392..66097419
-
Hg19::chr15:71406717..71406718,+p@chr15:71406717..71406718
+
Hg19::chr15:74902698..74902752,-p@chr15:74902698..74902752
-
Hg19::chr15:74902754..74902776,-p@chr15:74902754..74902776
-
Hg19::chr15:74902883..74902898,-p@chr15:74902883..74902898
-
Hg19::chr15:78556480..78556510,+p2@DNAJA4
Hg19::chr15:78556512..78556526,+p5@DNAJA4
Hg19::chr15:78556531..78556550,+p4@DNAJA4
Hg19::chr15:83847928..83847940,+p@chr15:83847928..83847940
+
Hg19::chr15:90167781..90167785,+p6@C15orf42
Hg19::chr15:91446520..91446538,+p8@MAN2A2
Hg19::chr15:96327410..96327414,+p@chr15:96327410..96327414
+
Hg19::chr16:11066326..11066335,+p5@CLEC16A
Hg19::chr16:15135587..15135609,-p@chr16:15135587..15135609
-
Hg19::chr16:15135627..15135636,-p@chr16:15135627..15135636
-
Hg19::chr16:15616042..15616045,+p@chr16:15616042..15616045
+
Hg19::chr16:1870721..1870738,-p@chr16:1870721..1870738
-
Hg19::chr16:1870741..1870751,-p@chr16:1870741..1870751
-
Hg19::chr16:215965..215984,+p1@HBM
Hg19::chr16:227522..227524,+p@chr16:227522..227524
+
Hg19::chr16:230526..230537,+p3@HBQ1
Hg19::chr16:31533569..31533578,-p@chr16:31533569..31533578
-
Hg19::chr16:31539183..31539194,+p2@AHSP
Hg19::chr16:31539197..31539245,+p1@AHSP
Hg19::chr16:31539446..31539459,+p3@AHSP
Hg19::chr16:32702010..32702014,+p@chr16:32702010..32702014
+
Hg19::chr16:449306..449319,+p19@NME4
Hg19::chr16:449604..449620,+p@chr16:449604..449620
+
Hg19::chr16:618933..618966,+p3@PIGQ
Hg19::chr16:67227238..67227266,+p@chr16:67227238..67227266
+
Hg19::chr16:67228493..67228510,+p@chr16:67228493..67228510
+
Hg19::chr16:67228546..67228549,+p@chr16:67228546..67228549
+
Hg19::chr16:67840442..67840471,-p1@RANBP10
Hg19::chr16:68798925..68798936,+p3@CDH1
Hg19::chr16:68804857..68804868,+p@chr16:68804857..68804868
+
Hg19::chr16:70569107..70569129,+p@chr16:70569107..70569129
+
Hg19::chr16:87894278..87894291,-p@chr16:87894278..87894291
-
Hg19::chr16:87894295..87894325,-p@chr16:87894295..87894325
-
Hg19::chr16:9061291..9061301,-p@chr16:9061291..9061301
-
Hg19::chr17:14108669..14108670,+p@chr17:14108669..14108670
+
Hg19::chr17:15367419..15367425,+p@chr17:15367419..15367425
+
Hg19::chr17:19913828..19913890,+p@chr17:19913828..19913890
+
Hg19::chr17:21200174..21200181,+p@chr17:21200174..21200181
+
Hg19::chr17:27188395..27188398,-p1@MIR451A
Hg19::chr17:27188967..27188976,-p2@MIR4732
Hg19::chr17:27188990..27189013,-p1@MIR4732
Hg19::chr17:27229897..27229912,-p7@DHRS13
Hg19::chr17:27229915..27229940,-p5@DHRS13
Hg19::chr17:27229948..27229996,-p1@DHRS13
Hg19::chr17:33887831..33887844,-p@chr17:33887831..33887844
-
Hg19::chr17:36617118..36617142,+p@chr17:36617118..36617142
+
Hg19::chr17:40094669..40094693,+p@chr17:40094669..40094693
+
Hg19::chr17:40095120..40095136,+p@chr17:40095120..40095136
+
Hg19::chr17:42299455..42299485,-p12@UBTF
Hg19::chr17:42327601..42327604,-p2@ENST00000399246
Hg19::chr17:42335086..42335096,-p@chr17:42335086..42335096
-
Hg19::chr17:42335464..42335476,-p@chr17:42335464..42335476
-
Hg19::chr17:42335481..42335498,-p@chr17:42335481..42335498
-
Hg19::chr17:42335924..42335934,-p6@SLC4A1
Hg19::chr17:42335947..42335956,-p7@SLC4A1
Hg19::chr17:42343955..42343974,-p@chr17:42343955..42343974
-
Hg19::chr17:42345472..42345483,-p2@SLC4A1
Hg19::chr17:42345487..42345514,-p1@SLC4A1
Hg19::chr17:42345731..42345756,+p@chr17:42345731..42345756
+
Hg19::chr17:42359003..42359041,-p@chr17:42359003..42359041
-
Hg19::chr17:42366115..42366125,+p@chr17:42366115..42366125
+
Hg19::chr17:42392517..42392522,+p17@RUNDC3A
Hg19::chr17:42392549..42392560,+p5@RUNDC3A
Hg19::chr17:42402342..42402376,+p@chr17:42402342..42402376
+
Hg19::chr17:42404132..42404173,-p@chr17:42404132..42404173
-
Hg19::chr17:45296707..45296731,+p@chr17:45296707..45296731
+
Hg19::chr17:56270084..56270090,+p1@EPX
Hg19::chr17:56570101..56570105,-p@chr17:56570101..56570105
-
Hg19::chr17:6541911..6541912,+p@chr17:6541911..6541912
+
Hg19::chr17:69410188..69410190,+p@chr17:69410188..69410190
+
Hg19::chr17:73630118..73630129,+p@chr17:73630118..73630129
+
Hg19::chr17:73630130..73630168,+p@chr17:73630130..73630168
+
Hg19::chr17:80416609..80416624,+p1@NARF
Hg19::chr18:11740276..11740278,+p@chr18:11740276..11740278
+
Hg19::chr18:2948322..2948334,+p@chr18:2948322..2948334
+
Hg19::chr18:30025131..30025133,+p@chr18:30025131..30025133
+
Hg19::chr18:43303741..43303750,+p7@SLC14A1
Hg19::chr18:5162245..5162248,+p@chr18:5162245..5162248
+
Hg19::chr18:55253830..55253862,-p2@FECH
Hg19::chr18:55253871..55253883,-p4@FECH
Hg19::chr18:55254177..55254184,-p10@FECH
Hg19::chr18:77146453..77146456,+p@chr18:77146453..77146456
+
Hg19::chr19:11494150..11494164,-p9@EPOR
Hg19::chr19:11494975..11495003,-p2@EPOR
Hg19::chr19:11495009..11495031,-p4@EPOR
Hg19::chr19:1207927..1207939,-p@chr19:1207927..1207939
-
Hg19::chr19:1207941..1207951,-p@chr19:1207941..1207951
-
Hg19::chr19:12912607..12912621,-p1@PRDX2
Hg19::chr19:12998003..12998021,-p1@KLF1
Hg19::chr19:13058957..13058994,+p@chr19:13058957..13058994
+
Hg19::chr19:13058998..13059014,+p@chr19:13058998..13059014
+
Hg19::chr19:13059019..13059036,+p@chr19:13059019..13059036
+
Hg19::chr19:15515037..15515042,-p@chr19:15515037..15515042
-
Hg19::chr19:15515090..15515101,-p@chr19:15515090..15515101
-
Hg19::chr19:17392467..17392509,+p2@ANKLE1
Hg19::chr19:17392513..17392520,+p5@ANKLE1
Hg19::chr19:17392537..17392555,+p3@ANKLE1
Hg19::chr19:17392838..17392849,+p2@BC108250
Hg19::chr19:17392863..17392874,+p1@BC108250
Hg19::chr19:18111859..18111865,+p7@ARRDC2
Hg19::chr19:18111890..18111902,+p5@ARRDC2
Hg19::chr19:18202152..18202153,+p@chr19:18202152..18202153
+
Hg19::chr19:18226305..18226306,+p@chr19:18226305..18226306
+
Hg19::chr19:18271657..18271669,+p4@PIK3R2
Hg19::chr19:19535964..19535966,+p@chr19:19535964..19535966
+
Hg19::chr19:40971643..40971664,-p1@BLVRB
Hg19::chr19:49377020..49377059,+p@chr19:49377020..49377059
+
Hg19::chr19:49377072..49377079,+p@chr19:49377072..49377079
+
Hg19::chr19:50880977..50880984,+p@chr19:50880977..50880984
+
Hg19::chr19:55740211..55740224,-p2@TMEM86B
Hg19::chr1:117730217..117730218,+p@chr1:117730217..117730218
+
Hg19::chr1:157244879..157244898,+p@chr1:157244879..157244898
+
Hg19::chr1:157244918..157244930,+p@chr1:157244918..157244930
+
Hg19::chr1:157249194..157249203,-p@chr1:157249194..157249203
-
Hg19::chr1:158580993..158580998,-p@chr1:158580993..158580998
-
Hg19::chr1:158581110..158581114,-p7@SPTA1
Hg19::chr1:158590627..158590630,-p6@SPTA1
Hg19::chr1:158656373..158656385,-p5@SPTA1
Hg19::chr1:158656386..158656417,-p1@SPTA1
Hg19::chr1:158656419..158656436,-p3@SPTA1
Hg19::chr1:158656470..158656481,-p4@SPTA1
Hg19::chr1:158656491..158656511,-p2@SPTA1
Hg19::chr1:159174731..159174745,+p7@DARC
Hg19::chr1:160793349..160793371,+p@chr1:160793349..160793371
+
Hg19::chr1:160793376..160793382,+p@chr1:160793376..160793382
+
Hg19::chr1:161136430..161136444,+p3@PPOX
Hg19::chr1:161136451..161136467,+p2@PPOX
Hg19::chr1:161481226..161481260,+p@chr1:161481226..161481260
+
Hg19::chr1:17417157..17417163,+p@chr1:17417157..17417163
+
Hg19::chr1:178986427..178986470,+p@chr1:178986427..178986470
+
Hg19::chr1:187065548..187065551,+p@chr1:187065548..187065551
+
Hg19::chr1:205225319..205225338,+p2@TMCC2
Hg19::chr1:205225344..205225347,+p24@TMCC2
Hg19::chr1:205313604..205313620,-p8@KLHDC8A
Hg19::chr1:205313640..205313654,-p10@KLHDC8A
Hg19::chr1:207818460..207818496,+p1@CR1L
Hg19::chr1:207823590..207823599,+p@chr1:207823590..207823599
+
Hg19::chr1:215510945..215510946,+p@chr1:215510945..215510946
+
Hg19::chr1:220146645..220146665,-p@chr1:220146645..220146665
-
Hg19::chr1:220146675..220146678,-p@chr1:220146675..220146678
-
Hg19::chr1:223976769..223976780,-p@chr1:223976769..223976780
-
Hg19::chr1:223976781..223976790,-p@chr1:223976781..223976790
-
Hg19::chr1:223976794..223976818,-p@chr1:223976794..223976818
-
Hg19::chr1:2250692..2250695,+p@chr1:2250692..2250695
+
Hg19::chr1:228362266..228362273,+p3@IBA57
Hg19::chr1:245724099..245724102,+p@chr1:245724099..245724102
+
Hg19::chr1:25246587..25246589,+p@chr1:25246587..25246589
+
Hg19::chr1:25598872..25598910,+p2@RHD
Hg19::chr1:25598961..25598966,+p5@RHD
Hg19::chr1:25598971..25598977,+p4@RHD
Hg19::chr1:25598993..25599007,+p1@RHD
Hg19::chr1:25599018..25599028,+p3@RHD
Hg19::chr1:25747423..25747428,-p3@RHCE
Hg19::chr1:25757489..25757504,+p3@TMEM57
Hg19::chr1:26880623..26880659,+p1@MIR1976
Hg19::chr1:29214785..29214809,-p@chr1:29214785..29214809
-
Hg19::chr1:3689211..3689226,+p1@LOC388588
Hg19::chr1:40849489..40849502,+p@chr1:40849489..40849502
+
Hg19::chr1:43291183..43291195,+p5@ERMAP
Hg19::chr1:43291220..43291239,+p2@ERMAP
Hg19::chr1:43291246..43291264,+p4@ERMAP
Hg19::chr1:43291273..43291307,+p3@ERMAP
Hg19::chr1:45478528..45478542,+p8@UROD
Hg19::chr1:45478543..45478550,+p12@UROD
Hg19::chr1:45478568..45478588,+p7@UROD
Hg19::chr1:45478600..45478621,+p6@UROD
Hg19::chr1:47694935..47694944,-p15@TAL1
Hg19::chr1:47695003..47695042,-p2@TAL1
Hg19::chr1:47695156..47695179,-p10@TAL1
Hg19::chr1:47697859..47697869,-p14@TAL1
Hg19::chr1:51760627..51760673,-p@chr1:51760627..51760673
-
Hg19::chr1:5543682..5543685,+p@chr1:5543682..5543685
+
Hg19::chr1:60710587..60710588,+p@chr1:60710587..60710588
+
Hg19::chr1:6298813..6298820,+p@chr1:6298813..6298820
+
Hg19::chr1:82964050..82964051,+p@chr1:82964050..82964051
+
Hg19::chr1:88012622..88012623,+p@chr1:88012622..88012623
+
Hg19::chr1:95582429..95582442,+p7@TMEM56
Hg19::chr1:95582446..95582458,+p5@TMEM56
Hg19::chr1:95582484..95582492,+p10@TMEM56
Hg19::chr1:95582841..95582862,+p2@TMEM56
Hg19::chr20:12872017..12872020,+p@chr20:12872017..12872020
+
Hg19::chr20:16555947..16555956,+p@chr20:16555947..16555956
+
Hg19::chr20:24432163..24432165,+p@chr20:24432163..24432165
+
Hg19::chr20:25581294..25581297,+p@chr20:25581294..25581297
+
Hg19::chr20:49307827..49307863,-p2@FAM65C
Hg19::chr20:49307869..49307892,-p5@FAM65C
Hg19::chr20:57591487..57591498,+p@chr20:57591487..57591498
+
Hg19::chr21:24400376..24400380,+p@chr21:24400376..24400380
+
Hg19::chr21:27203678..27203684,+p@chr21:27203678..27203684
+
Hg19::chr21:35126465..35126483,+p6@ITSN1
Hg19::chr21:37693106..37693121,-p@chr21:37693106..37693121
-
Hg19::chr21:47740595..47740627,+p@chr21:47740595..47740627
+
Hg19::chr22:19384642..19384665,-p@chr22:19384642..19384665
-
Hg19::chr22:19414183..19414187,+p@chr22:19414183..19414187
+
Hg19::chr22:19920217..19920224,+p@chr22:19920217..19920224
+
Hg19::chr22:19921172..19921195,+p@chr22:19921172..19921195
+
Hg19::chr22:24925278..24925288,+p@chr22:24925278..24925288
+
Hg19::chr22:26875543..26875557,-p18@HPS4
Hg19::chr22:26875565..26875576,-p15@HPS4
Hg19::chr22:30680245..30680254,-p@chr22:30680245..30680254
-
Hg19::chr22:31277711..31277716,+p5@OSBP2
Hg19::chr22:31277720..31277729,+p7@OSBP2
Hg19::chr22:39760130..39760162,+p3@SYNGR1
Hg19::chr22:39850516..39850528,+p@chr22:39850516..39850528
+
Hg19::chr22:39850542..39850565,+p@chr22:39850542..39850565
+
Hg19::chr22:39850568..39850596,+p@chr22:39850568..39850596
+
Hg19::chr22:40342819..40342836,+p12@GRAP2
Hg19::chr22:44584304..44584309,+p@chr22:44584304..44584309
+
Hg19::chr22:45072925..45072942,+p6@PRR5
Hg19::chr2:112191654..112191660,-p@chr2:112191654..112191660
-
Hg19::chr2:127403743..127403745,-p@chr2:127403743..127403745
-
Hg19::chr2:15694585..15694597,-p@chr2:15694585..15694597
-
Hg19::chr2:172137308..172137312,+p@chr2:172137308..172137312
+
Hg19::chr2:190446693..190446700,-p10@SLC40A1
Hg19::chr2:190446707..190446734,-p2@SLC40A1
Hg19::chr2:191334212..191334232,+p8@MFSD6
Hg19::chr2:199716850..199716852,+p@chr2:199716850..199716852
+
Hg19::chr2:202298241..202298252,-p10@TRAK2
Hg19::chr2:202298256..202298266,-p13@TRAK2
Hg19::chr2:202298268..202298283,-p5@TRAK2
Hg19::chr2:202298292..202298303,-p14@TRAK2
Hg19::chr2:218706844..218706855,-p34@TNS1
Hg19::chr2:235553582..235553587,+p@chr2:235553582..235553587
+
Hg19::chr2:239071211..239071240,+p@chr2:239071211..239071240
+
Hg19::chr2:242617772..242617776,+p1@AK022132
Hg19::chr2:62801311..62801318,+p@chr2:62801311..62801318
+
Hg19::chr2:70944855..70944901,-p3@ADD2
Hg19::chr2:71833597..71833600,+p@chr2:71833597..71833600
+
Hg19::chr2:74757774..74757779,+p24@HTRA2
Hg19::chr2:74757809..74757818,+p18@HTRA2
Hg19::chr2:74757842..74757874,+p8@HTRA2
Hg19::chr2:86820326..86820333,+p@chr2:86820326..86820333
+
Hg19::chr2:87816262..87816269,+p@chr2:87816262..87816269
+
Hg19::chr3:10067872..10067880,+p6@FANCD2
Hg19::chr3:108881832..108881835,-p@chr3:108881832..108881835
-
Hg19::chr3:128902547..128902549,+p@chr3:128902547..128902549
+
Hg19::chr3:131071343..131071344,+p@chr3:131071343..131071344
+
Hg19::chr3:141747950..141748004,-p7@TFDP2
Hg19::chr3:142682834..142682855,-p@chr3:142682834..142682855
-
Hg19::chr3:148558377..148558386,-p@chr3:148558377..148558386
-
Hg19::chr3:148558393..148558417,-p@chr3:148558393..148558417
-
Hg19::chr3:150451300..150451324,-p@chr3:150451300..150451324
-
Hg19::chr3:169487256..169487278,+p@chr3:169487256..169487278
+
Hg19::chr3:16973471..16973472,+p@chr3:16973471..16973472
+
Hg19::chr3:183735995..183735999,-p14@ABCC5
Hg19::chr3:183736048..183736057,-p9@ABCC5
Hg19::chr3:183736074..183736095,-p6@ABCC5
Hg19::chr3:195802025..195802031,-p@chr3:195802025..195802031
-
Hg19::chr3:195808952..195808972,-p1@TFRC
Hg19::chr3:39425914..39425957,+p@chr3:39425914..39425957
+
Hg19::chr3:39429270..39429281,+p@chr3:39429270..39429281
+
Hg19::chr3:39429286..39429300,+p@chr3:39429286..39429300
+
Hg19::chr3:39429301..39429308,+p@chr3:39429301..39429308
+
Hg19::chr3:49726561..49726577,+p3@RNF123
Hg19::chr3:49726589..49726592,+p7@RNF123
Hg19::chr3:49726593..49726603,+p4@RNF123
Hg19::chr3:70535958..70535960,+p@chr3:70535958..70535960
+
Hg19::chr3:93781728..93781739,+p5@NSUN3
Hg19::chr3:94893422..94893424,+p@chr3:94893422..94893424
+
Hg19::chr3:98304320..98304344,-p4@CPOX
Hg19::chr3:98304360..98304361,-p16@CPOX
Hg19::chr3:98304370..98304381,-p11@CPOX
Hg19::chr4:121354150..121354152,+p@chr4:121354150..121354152
+
Hg19::chr4:123332283..123332286,+p@chr4:123332283..123332286
+
Hg19::chr4:144266199..144266242,+p@chr4:144266199..144266242
+
Hg19::chr4:144266248..144266261,+p@chr4:144266248..144266261
+
Hg19::chr4:144826682..144826716,-p1@GYPE
Hg19::chr4:144940524..144940541,-p1@GYPB
Hg19::chr4:145061865..145061877,-p1@GYPA
Hg19::chr4:151865248..151865256,-p@chr4:151865248..151865256
-
Hg19::chr4:153858933..153858963,+p@chr4:153858933..153858963
+
Hg19::chr4:153884954..153884958,+p@chr4:153884954..153884958
+
Hg19::chr4:159512097..159512100,+p@chr4:159512097..159512100
+
Hg19::chr4:160049078..160049079,+p@chr4:160049078..160049079
+
Hg19::chr4:160049100..160049114,+p@chr4:160049100..160049114
+
Hg19::chr4:160049119..160049139,+p@chr4:160049119..160049139
+
Hg19::chr4:162084214..162084215,+p@chr4:162084214..162084215
+
Hg19::chr4:168790939..168790942,+p@chr4:168790939..168790942
+
Hg19::chr4:170586774..170586807,+p@chr4:170586774..170586807
+
Hg19::chr4:175593804..175593809,+p@chr4:175593804..175593809
+
Hg19::chr4:179543268..179543270,+p@chr4:179543268..179543270
+
Hg19::chr4:186111531..186111556,-p8@KIAA1430
Hg19::chr4:186111558..186111570,-p10@KIAA1430
Hg19::chr4:190941380..190941381,+p@chr4:190941380..190941381
+
Hg19::chr4:26378984..26378987,+p@chr4:26378984..26378987
+
Hg19::chr4:39367916..39367921,-p14@RFC1
Hg19::chr4:44493759..44493769,+p@chr4:44493759..44493769
+
Hg19::chr4:48683194..48683232,-p3@FRYL
Hg19::chr4:82805715..82805717,+p@chr4:82805715..82805717
+
Hg19::chr4:89930975..89930996,-p@chr4:89930975..89930996
-
Hg19::chr4:89930997..89931007,-p@chr4:89930997..89931007
-
Hg19::chr4:89931038..89931064,-p@chr4:89931038..89931064
-
Hg19::chr4:89931092..89931098,-p@chr4:89931092..89931098
-
Hg19::chr4:99416381..99416382,-p@chr4:99416381..99416382
-
Hg19::chr5:112167677..112167682,+p@chr5:112167677..112167682
+
Hg19::chr5:131330285..131330308,-p5@ACSL6
Hg19::chr5:131330315..131330321,-p18@ACSL6
Hg19::chr5:131631027..131631041,-p11@P4HA2
Hg19::chr5:131631044..131631062,-p13@P4HA2
Hg19::chr5:140428907..140428908,-p@chr5:140428907..140428908
-
Hg19::chr5:150828080..150828104,+p@chr5:150828080..150828104
+
Hg19::chr5:150828113..150828123,+p@chr5:150828113..150828123
+
Hg19::chr5:43043442..43043457,+p@chr5:43043442..43043457
+
Hg19::chr5:64396783..64396794,-p@chr5:64396783..64396794
-
Hg19::chr5:94982435..94982499,+p1@RFESD
Hg19::chr5:94983748..94983760,+p2@RFESD
Hg19::chr5:96077888..96077923,+p14@CAST
Hg19::chr5:96077935..96077944,+p37@CAST
Hg19::chr6:10585661..10585670,+p26@GCNT2
Hg19::chr6:10585672..10585677,+p42@GCNT2
Hg19::chr6:10585684..10585689,+p37@GCNT2
Hg19::chr6:10585715..10585722,+p35@GCNT2
Hg19::chr6:10585950..10585967,+p15@GCNT2
Hg19::chr6:10585980..10586009,+p6@GCNT2
Hg19::chr6:110796631..110796639,+p@chr6:110796631..110796639
+
Hg19::chr6:110797789..110797797,-p2@SLC22A16
Hg19::chr6:110797799..110797839,-p1@SLC22A16
Hg19::chr6:119215398..119215410,+p4@ASF1A
Hg19::chr6:119215448..119215462,+p2@ASF1A
Hg19::chr6:151255913..151255917,+p1@ENST00000404372
Hg19::chr6:155472342..155472346,-p@chr6:155472342..155472346
-
Hg19::chr6:169585185..169585187,+p@chr6:169585185..169585187
+
Hg19::chr6:2770594..2770615,-p@chr6:2770594..2770615
-
Hg19::chr6:30128290..30128318,-p6@TRIM10
Hg19::chr6:30128647..30128656,-p9@TRIM10
Hg19::chr6:30128657..30128681,-p2@TRIM10
Hg19::chr6:30128954..30128971,-p3@TRIM10
Hg19::chr6:30128977..30129005,-p1@TRIM10
Hg19::chr6:30129008..30129011,-p10@TRIM10
Hg19::chr6:30129012..30129022,-p5@TRIM10
Hg19::chr6:30129028..30129031,-p13@TRIM10
Hg19::chr6:30129053..30129065,-p4@TRIM10
Hg19::chr6:37250429..37250469,+p@chr6:37250429..37250469
+
Hg19::chr6:41009119..41009130,+p@chr6:41009119..41009130
+
Hg19::chr6:41010200..41010223,+p1@TSPO2
Hg19::chr6:41010295..41010314,+p2@TSPO2
Hg19::chr6:43599020..43599075,-p@chr6:43599020..43599075
-
Hg19::chr6:44193773..44193785,+p@chr6:44193773..44193785
+
Hg19::chr6:44193801..44193811,+p@chr6:44193801..44193811
+
Hg19::chr6:49604528..49604539,-p3@RHAG
Hg19::chr6:49604545..49604560,-p1@RHAG
Hg19::chr6:49604575..49604592,-p2@RHAG
Hg19::chr6:49604594..49604605,-p4@RHAG
Hg19::chr6:50700492..50700495,+p@chr6:50700492..50700495
+
Hg19::chr7:100884351..100884371,-p@chr7:100884351..100884371
-
Hg19::chr7:12727250..12727265,+p1@ARL4A
Hg19::chr7:135808694..135808697,+p@chr7:135808694..135808697
+
Hg19::chr7:142659407..142659456,-p1@KEL
Hg19::chr7:143122350..143122351,+p@chr7:143122350..143122351
+
Hg19::chr7:150652854..150652875,-p3@KCNH2
Hg19::chr7:158204151..158204153,+p@chr7:158204151..158204153
+
Hg19::chr7:23205190..23205198,+p10@KLHL7
Hg19::chr7:23205201..23205207,+p13@KLHL7
Hg19::chr7:44151720..44151721,+p@chr7:44151720..44151721
+
Hg19::chr7:51217927..51217928,+p@chr7:51217927..51217928
+
Hg19::chr7:73039666..73039667,+p@chr7:73039666..73039667
+
Hg19::chr7:80275752..80275779,+p3@CD36
Hg19::chr7:80275790..80275804,+p22@CD36
Hg19::chr7:80276090..80276111,+p21@CD36
Hg19::chr7:80276114..80276144,+p20@CD36
Hg19::chr8:101412217..101412218,+p@chr8:101412217..101412218
+
Hg19::chr8:128594404..128594405,+p@chr8:128594404..128594405
+
Hg19::chr8:132821610..132821613,+p@chr8:132821610..132821613
+
Hg19::chr8:138915590..138915591,+p@chr8:138915590..138915591
+
Hg19::chr8:144698414..144698424,-p@chr8:144698414..144698424
-
Hg19::chr8:144698454..144698469,-p@chr8:144698454..144698469
-
Hg19::chr8:19830089..19830095,+p@chr8:19830089..19830095
+
Hg19::chr8:21823726..21823759,+p4@XPO7
Hg19::chr8:21823761..21823784,+p3@XPO7
Hg19::chr8:21823788..21823800,+p6@XPO7
Hg19::chr8:21916710..21916734,+p14@EPB49
Hg19::chr8:21939381..21939384,-p1@CU675346
Hg19::chr8:23366568..23366571,+p@chr8:23366568..23366571
+
Hg19::chr8:23424791..23424796,+p60@SLC25A37
Hg19::chr8:29850532..29850533,+p@chr8:29850532..29850533
+
Hg19::chr8:41654273..41654284,-p@chr8:41654273..41654284
-
Hg19::chr8:41655094..41655103,-p6@ANK1
Hg19::chr8:41655107..41655159,-p1@ANK1
Hg19::chr8:41655316..41655330,+p@chr8:41655316..41655330
+
Hg19::chr8:52593955..52593956,+p@chr8:52593955..52593956
+
Hg19::chr8:54185012..54185014,+p@chr8:54185012..54185014
+
Hg19::chr8:63838198..63838201,+p@chr8:63838198..63838201
+
Hg19::chr9:100692863..100692880,-p8@HEMGN
Hg19::chr9:100700492..100700503,-p2@HEMGN
Hg19::chr9:100700696..100700723,+p@chr9:100700696..100700723
+
Hg19::chr9:116159523..116159534,-p5@ALAD
Hg19::chr9:116159538..116159561,-p2@ALAD
Hg19::chr9:116159635..116159645,-p6@ALAD
Hg19::chr9:123853258..123853276,-p@chr9:123853258..123853276
-
Hg19::chr9:135854058..135854072,+p3@GFI1B
Hg19::chr9:135854074..135854089,+p2@GFI1B
Hg19::chr9:135854091..135854159,+p1@GFI1B
Hg19::chr9:135854660..135854664,+p@chr9:135854660..135854664
+
Hg19::chr9:138851858..138851869,-p@chr9:138851858..138851869
-
Hg19::chr9:138851882..138851893,-p@chr9:138851882..138851893
-
Hg19::chr9:138852021..138852030,+p@chr9:138852021..138852030
+
Hg19::chr9:139129859..139129871,-p@chr9:139129859..139129871
-
Hg19::chr9:45465498..45465501,+p@chr9:45465498..45465501
+
Hg19::chr9:72130800..72130805,+p@chr9:72130800..72130805
+
Hg19::chr9:7510776..7510779,+p@chr9:7510776..7510779
+
Hg19::chr9:91032700..91032704,+p@chr9:91032700..91032704
+
Hg19::chrX:107332025..107332032,+p@chrX:107332025..107332032
+
Hg19::chrX:107332036..107332041,+p@chrX:107332036..107332041
+
Hg19::chrX:107332053..107332067,+p@chrX:107332053..107332067
+
Hg19::chrX:118541899..118541901,+p@chrX:118541899..118541901
+
Hg19::chrX:134086960..134086961,+p@chrX:134086960..134086961
+
Hg19::chrX:151425165..151425166,+p@chrX:151425165..151425166
+
Hg19::chrX:17090694..17090704,+p@chrX:17090694..17090704
+
Hg19::chrX:17090720..17090731,+p@chrX:17090720..17090731
+
Hg19::chrX:48644976..48644983,+p2@GATA1
Hg19::chrX:48644984..48645005,+p1@GATA1
Hg19::chrX:87353514..87353515,+p@chrX:87353514..87353515
+
Hg19::chrX:97970711..97970715,+p@chrX:97970711..97970715
+
Hg19::chrY:15983559..15983568,+p@chrY:15983559..15983568
+
Hg19::chrY:22737604..22737618,+p3@EIF1AY
Hg19::chrY:22737619..22737669,+p1@EIF1AY
Hg19::chrY:22737678..22737720,+p2@EIF1AY


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

p.valueFDRnGenesnPathwayName
9.22138271824498e-121.94571175354969e-09843Porphyrin and chlorophyll metabolism (KEGG):00860
2.08288425612642e-050.00219744289021337161138Metabolic pathways (KEGG):01100
0.0005110272488802480.0404350310676496488Hematopoietic cell lineage (KEGG):04640
7.14094409490062e-081.13005440301802e-05651Malaria (KEGG):05144
6.53990436376727e-162.06987973113234e-1379Heme Biosynthesis (Wikipathways):WP561
2.11138182772082e-161.33650469694728e-13814Metabolism of porphyrins (Reactome):REACT_9431
0.0002753423400484670.024898814464382811740TGF beta receptor down reg. targets (Netpath):NetPath_7
8.29717954254321e-060.00105042293008597310{SPTAN1,10} (Static Module):NA



Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0006783heme biosynthetic process1.99301273996344e-11
GO:0042168heme metabolic process6.68600696204504e-11
GO:0006779porphyrin biosynthetic process2.72998340136117e-10
GO:0006778porphyrin metabolic process6.85167401916645e-10
GO:0033014tetrapyrrole biosynthetic process6.85167401916645e-10
GO:0033013tetrapyrrole metabolic process1.86280090892107e-09
GO:0046148pigment biosynthetic process2.43251010679236e-09
GO:0042440pigment metabolic process5.50879751734238e-09
GO:0019748secondary metabolic process2.72264079333764e-08
GO:0046483heterocycle metabolic process6.03642816456225e-07
GO:0005344oxygen transporter activity1.50494060027449e-06
GO:0005833hemoglobin complex1.67539254610695e-06
GO:0015671oxygen transport2.23168958313686e-06
GO:0015669gas transport2.73199423140941e-06
GO:0005506iron ion binding2.73199423140941e-06
GO:0031967organelle envelope2.43106574620517e-05
GO:0031975envelope2.43106574620517e-05
GO:0005740mitochondrial envelope4.20460765065696e-05
GO:0019825oxygen binding4.20460765065696e-05
GO:0044445cytosolic part8.98422710584717e-05
GO:0005737cytoplasm0.000105287408832692
GO:0051188cofactor biosynthetic process0.000207837484422942
GO:0044459plasma membrane part0.000207837484422942
GO:0044424intracellular part0.000248295305902869
GO:0051186cofactor metabolic process0.000383172372369166
GO:0005887integral to plasma membrane0.000415172962574889
GO:0044429mitochondrial part0.000423869175566482
GO:0031226intrinsic to plasma membrane0.000443705444906324
GO:0044464cell part0.000754002661362958
GO:0044444cytoplasmic part0.000801548385687883
GO:0065008regulation of biological quality0.000976024217327778
GO:0051693actin filament capping0.000976024217327778
GO:0051016barbed-end actin filament capping0.000976024217327778
GO:0030835negative regulation of actin filament depolymerization0.00109447769973282
GO:0005624membrane fraction0.0011540491141374
GO:0030834regulation of actin filament depolymerization0.0011540491141374
GO:0030042actin filament depolymerization0.0011540491141374
GO:0005886plasma membrane0.00130458001373231
GO:0030863cortical cytoskeleton0.00141564946523099
GO:0005758mitochondrial intermembrane space0.0019530118453805
GO:0043249erythrocyte maturation0.00205489340237058
GO:0000267cell fraction0.00208594207054039
GO:0031970organelle envelope lumen0.00247634860687214
GO:0005200structural constituent of cytoskeleton0.00279739668773175
GO:0005381iron ion transmembrane transporter activity0.00279739668773175
GO:0030218erythrocyte differentiation0.00279739668773175
GO:0032502developmental process0.00337877197355728
GO:0048821erythrocyte development0.00367137887040516
GO:0031966mitochondrial membrane0.00479118163273406
GO:0020037heme binding0.00487295442951012
GO:0046906tetrapyrrole binding0.00487295442951012
GO:0005622intracellular0.00487295442951012
GO:0051248negative regulation of protein metabolic process0.00506034393527609
GO:0022892substrate-specific transporter activity0.00506034393527609
GO:0051234establishment of localization0.00516955196778364
GO:0015695organic cation transport0.00534895534949763
GO:0008064regulation of actin polymerization and/or depolymerization0.00534895534949763
GO:0005829cytosol0.00543251356633307
GO:0006800oxygen and reactive oxygen species metabolic process0.00543251356633307
GO:0044448cell cortex part0.00543251356633307
GO:0051261protein depolymerization0.00561170583673194
GO:0030832regulation of actin filament length0.00561170583673194
GO:0044425membrane part0.00568771963053565
GO:0032535regulation of cellular component size0.00568771963053565
GO:0032956regulation of actin cytoskeleton organization and biogenesis0.00568771963053565
GO:0008091spectrin0.00568771963053565
GO:0016020membrane0.00698386154566733
GO:0019866organelle inner membrane0.00724488380031426
GO:0051129negative regulation of cellular component organization and biogenesis0.00724488380031426
GO:0042744hydrogen peroxide catabolic process0.00772730554134139
GO:0006810transport0.00772730554134139
GO:0033043regulation of organelle organization and biogenesis0.00850164725875491
GO:0051493regulation of cytoskeleton organization and biogenesis0.00850164725875491
GO:0005515protein binding0.00850164725875491
GO:0016634oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor0.00850164725875491
GO:0042743hydrogen peroxide metabolic process0.00850164725875491
GO:0006826iron ion transport0.00850164725875491
GO:0043233organelle lumen0.00878441285894738
GO:0031974membrane-enclosed lumen0.00878441285894738
GO:0055082cellular chemical homeostasis0.00914692040576412
GO:0006873cellular ion homeostasis0.00914692040576412
GO:0008154actin polymerization and/or depolymerization0.00973362701208481
GO:0044446intracellular organelle part0.00981894218394624
GO:0044422organelle part0.0101512408973475
GO:0005739mitochondrion0.0102069425801395
GO:0005938cell cortex0.0106736002878567
GO:0030864cortical actin cytoskeleton0.0113703490443073
GO:0004601peroxidase activity0.0117809984242118
GO:0016684oxidoreductase activity, acting on peroxide as acceptor0.0117809984242118
GO:0031224intrinsic to membrane0.0123472028152336
GO:0050801ion homeostasis0.0138239647507748
GO:0051179localization0.0144483134599268
GO:0008015blood circulation0.0144483134599268
GO:0003013circulatory system process0.0144483134599268
GO:0030097hemopoiesis0.0146266923650598
GO:0042542response to hydrogen peroxide0.0161479756610863
GO:0030099myeloid cell differentiation0.0161479756610863
GO:0048534hemopoietic or lymphoid organ development0.0184353641029009
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors0.0190937679542153
GO:0048770pigment granule0.0190937679542153
GO:0042470melanosome0.0190937679542153
GO:0031090organelle membrane0.0190937679542153
GO:0015629actin cytoskeleton0.0191623001355296
GO:0006996organelle organization and biogenesis0.020315135267643
GO:0048878chemical homeostasis0.0204845883251409
GO:0002520immune system development0.0204845883251409
GO:0008092cytoskeletal protein binding0.0213026801330949
GO:0016021integral to membrane0.0216266365579753
GO:0005743mitochondrial inner membrane0.0221192997666714
GO:0004900erythropoietin receptor activity0.0221192997666714
GO:0018130heterocycle biosynthetic process0.0221192997666714
GO:0048075positive regulation of eye pigmentation0.0221192997666714
GO:0006701progesterone biosynthetic process0.0221192997666714
GO:0009589detection of UV0.0221192997666714
GO:0001692histamine metabolic process0.0221192997666714
GO:0045199maintenance of epithelial cell polarity0.0221192997666714
GO:0004096catalase activity0.0221192997666714
GO:0000114G1-specific transcription in mitotic cell cycle0.0221192997666714
GO:0042602flavin reductase activity0.0221192997666714
GO:0004729protoporphyrinogen oxidase activity0.0221192997666714
GO:0048250mitochondrial iron ion transport0.0221192997666714
GO:0048073regulation of eye pigmentation0.0221192997666714
GO:0004418hydroxymethylbilane synthase activity0.0221192997666714
GO:0048087positive regulation of pigmentation0.0221192997666714
GO:0001694histamine biosynthetic process0.0221192997666714
GO:0045575basophil activation0.0221192997666714
GO:0030507spectrin binding0.0221192997666714
GO:0000302response to reactive oxygen species0.0221192997666714
GO:0007275multicellular organismal development0.0223352171334581
GO:0051128regulation of cellular component organization and biogenesis0.0253281589284812
GO:0000041transition metal ion transport0.0264252931433188
GO:0046915transition metal ion transmembrane transporter activity0.0264252931433188
GO:0005856cytoskeleton0.0267354800758849
GO:0007599hemostasis0.0281774795693257
GO:0019725cellular homeostasis0.0368427354278818
GO:0006979response to oxidative stress0.0368427354278818
GO:0065007biological regulation0.0368427354278818
GO:0004998transferrin receptor activity0.0368427354278818
GO:0006345loss of chromatin silencing0.0368427354278818
GO:0008198ferrous iron binding0.0368427354278818
GO:0004655porphobilinogen synthase activity0.0368427354278818
GO:0051300spindle pole body organization and biogenesis0.0368427354278818
GO:0035090maintenance of apical/basal cell polarity0.0368427354278818
GO:0004074biliverdin reductase activity0.0368427354278818
GO:0006780uroporphyrinogen III biosynthetic process0.0368427354278818
GO:0030011maintenance of cell polarity0.0368427354278818
GO:0048070regulation of pigmentation during development0.0368427354278818
GO:0046502uroporphyrinogen III metabolic process0.0368427354278818
GO:0004572mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity0.0368427354278818
GO:0008379thioredoxin peroxidase activity0.0368427354278818
GO:0005638lamin filament0.0368427354278818
GO:0007100mitotic centrosome separation0.0368427354278818
GO:0005049nuclear export signal receptor activity0.0368427354278818
GO:0051015actin filament binding0.0379056072344673
GO:0043229intracellular organelle0.0381134703512828
GO:0043226organelle0.0382794173081687
GO:0050878regulation of body fluid levels0.0390266973317785
GO:0007015actin filament organization0.0407243480411943
GO:0022603regulation of anatomical structure morphogenesis0.0418813479437632
GO:0022604regulation of cell morphogenesis0.0418813479437632
GO:0008360regulation of cell shape0.0418813479437632
GO:0048469cell maturation0.0472857370786174
GO:0008375acetylglucosaminyltransferase activity0.0472857370786174
GO:0042827platelet dense granule0.047431010983356
GO:0016699oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor0.047431010983356
GO:0016695oxidoreductase activity, acting on hydrogen as donor0.047431010983356
GO:0008519ammonium transmembrane transporter activity0.047431010983356
GO:0004853uroporphyrinogen decarboxylase activity0.047431010983356
GO:0031304intrinsic to mitochondrial inner membrane0.047431010983356
GO:0015879carnitine transport0.047431010983356
GO:0015226carnitine transporter activity0.047431010983356
GO:0004656procollagen-proline 4-dioxygenase activity0.047431010983356
GO:0008901ferredoxin hydrogenase activity0.047431010983356
GO:0004109coproporphyrinogen oxidase activity0.047431010983356
GO:0031545peptidyl-proline 4-dioxygenase activity0.047431010983356
GO:0019987negative regulation of anti-apoptosis0.047431010983356
GO:0051299centrosome separation0.047431010983356
GO:0015696ammonium transport0.047431010983356



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
blood9.05e-4315
haemolymphatic fluid9.05e-4315
organism substance9.05e-4315
adult organism1.38e-10114
throat7.52e-082
hematopoietic system7.90e-0898
blood island7.90e-0898
hemolymphoid system4.92e-07108
cardiovascular system5.15e-07109
circulatory system8.36e-07112


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)
MA0003.14.95664e-14
MA0004.10.011919
MA0006.10.0158217
MA0007.11.44885
MA0009.10.961749
MA0014.10
MA0017.10.0555717
MA0019.10.0202656
MA0024.10.0958525
MA0025.10.348266
MA0027.11.7519
MA0028.13.99956e-06
MA0029.11.53606
MA0030.11.43515
MA0031.10.600541
MA0038.10.0323009
MA0040.10.202814
MA0041.10.17346
MA0042.12.24984
MA0043.10.02821
MA0046.10.261469
MA0048.10.121596
MA0050.11.39196
MA0051.10.139492
MA0052.10.0812582
MA0055.10.142555
MA0056.10
MA0057.10.00023109
MA0058.12.80806e-05
MA0059.10.00476081
MA0060.12.07449e-05
MA0061.10.000428218
MA0063.10
MA0066.11.03239
MA0067.10.0390258
MA0068.10.168222
MA0069.10.0951673
MA0070.10.144239
MA0071.10.181827
MA0072.10.137557
MA0073.10.0158831
MA0074.10.186143
MA0076.11.57541e-08
MA0077.10.302446
MA0078.10.132444
MA0081.10.0258784
MA0083.11.51516
MA0084.10.312761
MA0087.10.134007
MA0088.10.113923
MA0089.10
MA0090.10.439322
MA0091.11.46998
MA0092.10.119747
MA0093.10.000466669
MA0095.10
MA0098.10
MA0100.10.736474
MA0101.10.0101556
MA0103.10.455437
MA0105.10.000121781
MA0106.10.286549
MA0107.10.000553281
MA0108.21.09213
MA0109.10
MA0111.10.057628
MA0113.10.451522
MA0114.10.0912111
MA0115.10.0032626
MA0116.11.53096
MA0117.10.0917039
MA0119.10.46523
MA0122.10.467938
MA0124.10.341881
MA0125.10.30735
MA0130.10
MA0131.10.119657
MA0132.10
MA0133.10
MA0135.10.0169144
MA0136.10.0037727
MA0139.10.00383325
MA0140.184.6247
MA0141.11.98691
MA0142.10.87541
MA0143.10.275323
MA0144.10.523263
MA0145.10.0379499
MA0146.10.0182912
MA0147.10.00236108
MA0148.13.87312
MA0149.10.00216008
MA0062.26.89494e-15
MA0035.235.9927
MA0039.20.00141856
MA0138.20.134964
MA0002.20.423068
MA0137.20.321984
MA0104.25.90341e-05
MA0047.23.17877
MA0112.20.624286
MA0065.20.511036
MA0150.13.29159
MA0151.10
MA0152.11.59881
MA0153.10.271415
MA0154.10.43585
MA0155.10.0365033
MA0156.14.06529e-05
MA0157.10.55491
MA0158.10
MA0159.10.00801059
MA0160.10.400018
MA0161.10
MA0162.11.38219e-11
MA0163.16.89723e-08
MA0164.10.415306
MA0080.21.61479e-05
MA0018.20.00530552
MA0099.20.591051
MA0079.20
MA0102.20.0412533
MA0258.12.04409
MA0259.10.000681904
MA0442.10



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
BCL3#602271.705250046985260.005762694851667720.0259474062346766
CCNT2#9051621.876535019137013.10588365613916e-166.07444537759397e-14
EP300#20331211.498440491541152.76794318784568e-069.57539644237878e-05
ETS1#2113871.547353199692153.0503172861671e-050.000626740285362987
FOSL1#8061342.46848575933582.01297224415327e-067.35851621305997e-05
GABPB1#25531251.615101425087333.11431126304437e-082.10385222510408e-06
GATA1#26233258.056855844122751.64192983228756e-2188.574075487714e-215
GATA2#26241944.520140322320795.91299295673733e-756.93873113942348e-72
HDAC2#30661243.041200931154765.34464784025694e-292.03718859776859e-26
HDAC8#5586957.098574347472080.0007724685772267020.00605583589078063
HMGN3#93241191.77924529996112.89145469683763e-102.93470006883406e-08
IRF1#36591101.535809895597862.96776239176603e-060.000101456673137038
JUNB#3726663.693421856578051.67695057593379e-194.08249513286595e-17
JUND#37271131.444967139728383.24052026595455e-050.000645255855206916
MAFK#7975512.526759396762942.42355870433374e-092.0595121848813e-07
NFE2#4778223.105107375385454.26733762731646e-060.000135135377337569
POLR2A#54303671.44079582412582.67218068690909e-227.5426994259486e-20
REST#59781432.522768019024331.47855832744175e-254.79562587452451e-23
SIRT6#51548205.617491919196521.06319870204922e-099.8004774265947e-08
SMARCA4#65975916.90893655423293.66970335926929e-522.8601503667069e-49
SMARCB1#6598441.468225766674450.007763901596972510.0319271614319098
STAT1#6772461.741321800495730.0002326336946741560.00255640050905663
STAT2#6773495.846297601710411.26511975667145e-223.61994088402765e-20
TAL1#688622412.2313896448753.44900059357985e-1781.09154597876632e-174
ZBTB7A#513411091.465005693891172.6238814471535e-050.000565371476086783



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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