Personal tools

FFCP PHASE1:Mm9::chrX:7318414..7318447,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=54648|HGNC=|MCL_coexpression_id=728|UniProt=|association_with_transcript=0bp_to_ENSMUST00000153925_5end|description=CAGE_peak_2_at_Ccdc120_5end|id=chrX:7318414..7318447,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.19e-19!130;UBERON:0000925!1.19e-19!130;UBERON:0006595!1.19e-19!130;UBERON:0001007!6.52e-19!128;UBERON:0001555!6.52e-19!128;UBERON:0007026!6.52e-19!128;UBERON:0004921!7.02e-18!126;UBERON:0004185!7.02e-18!126;UBERON:0005409!1.72e-12!59;UBERON:0000160!5.86e-12!43;UBERON:0000077!7.87e-09!97;UBERON:0005178!3.85e-08!17;UBERON:0005181!3.85e-08!17;UBERON:0002224!3.85e-08!17;UBERON:0000915!3.85e-08!17;UBERON:0008947!3.85e-08!17;UBERON:0003258!3.85e-08!17;UBERON:0001041!2.27e-07!92;UBERON:0005153!2.73e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.45e-12,118;UBERON:0000925,1.45e-12,118;UBERON:0006595,1.45e-12,118;UBERON:0001007,6.22e-12,116;UBERON:0001555,6.22e-12,116;UBERON:0007026,6.22e-12,116;UBERON:0004921,4.66e-11,114;UBERON:0000160,1.41e-09,31;UBERON:0005409,2.71e-09,47;UBERON:0005178,7.81e-09,17;UBERON:0005181,7.81e-09,17;UBERON:0002224,7.81e-09,17;UBERON:0000915,7.81e-09,17;UBERON:0008947,7.81e-09,17;UBERON:0003258,7.81e-09,17;UBERON:0005153,6.78e-08,17;UBERON:0002048,5.88e-07,14;UBERON:0000117,5.88e-07,14;UBERON:0000171,5.88e-07,14;UBERON:0000170,5.88e-07,14;UBERON:0005597,5.88e-07,14;UBERON:0000118,5.88e-07,14|phase1_expression=0.960893082628764,28.964958834067,29.1199513209303,20.5675663688644,12.5223932486587,4.70061961353291,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,14.0793332058198,12.8469197397615,9.18771142584032,12.0613358924541,12.7128027284675,14.8218267175972,7.56090389279792,8.64748991555688,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0,0,0,0,0.186399445825301,0,0,7.24661221754194,0.860423876981386,9.51959867190851,0.539703191637817,1.29955283489534,0.448026887097336,2.38755514223978,0,0,0,2.81686839553361,0,0,0,18.6182295269644,15.9616715249312,14.6602089054287,5.02409070763864,0,0,0,0.304465478312141,0.230615497256059,0,0.352766121407114,0,25.9554716121093,0.144599356919912,0,0,0,0,13.0474232852686,19.0307518057506,26.3902850584953,13.7946809812639,0,0,0,0,0,0,0,0,0,0,1.73126918545538,3.11017426525233,12.6361379216837,13.8891624885073,0.520481771850815,0,0.540186389416048,1.65775299619287,1.29269348387523,0.512454881139399,0.655912071918102,4.65666067330228,0.862271971731369,0.567318240503458,1.05570674498369,2.19195732427575,5.00485048606076,16.3678518265418,13.1700567301084,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,45.9282108347479,14.2803305998314,0.213288250535234,1.16118335930219,1.80414445850931,1.81515172161008,1.33426826306922,4.37518940058886,14.7104009078799,15.317002789333,11.5614196048124,15.3196483471686,17.3518037536017,15.2799299471218,12.5360068927323,12.5459002150251,0.948339504765408,0.685491075658373,2.25415471346161,1.62921062276251,3.10323979468201,4.76923575254166,4.61626721007078,2.21415221969403,4.23896565171712,3.82531208157582,0.889357881261447,0.166845105716094,0,0.449724224769707,1.01430060694251,1.4470629585145,2.29163266603278,4.60313819921297,7.94462611197673,4.11842119782122,2.87536413054709,4.09355042435354,5.61667811606209,3.53610429125956,2.33216637578486,3.37710464954357,14.041242452662,1.13694847062291,2.77040459951444,3.73439188705414,6.57132695207806,17.7556632888325,24.5184950112594,25.7576415172294,12.1379060961767,13.2878813789265,6.85655505227195,9.99566219766002,10.1884139300878,15.9113964439663,0,0,4.42587845717133,11.313406598494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,1.42452482933804,1.79175655288934,4.28922319728592,1.32745138339963,2.42780636154981,4.83717691143602,3.20628635585027,5.61073596473468,9.53048958626175,11.3708448994017,3.27180356529755,3.56497378384721,3.47640433729398,2.10837217149998,2.06271086496374,5.44703369206061,1.08036656418786,2.58717367565509,1.92903331528433,1.41872186913819,2.49716344642899,2.13913726782757,5.17590413494819,1.87737366450968,20.1240467320629,5.73373834942901,31.9879330706471,26.3187015514326,12.7260271598409,18.2639686324799,18.2196398717018,18.3632927076806,0,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,14.3200592702267,0.790839983952838,4.47302827679067,5.83228840437727,8.78170843260769,10.4814030598165,13.8910276776365,13.3072063717791,13.0877970992015,8.55458823725833,20.5041973318685,0,0,0,0,0,0,0,0.651021924219751,0,0,0.576060012515731,1.89606672376907,1.21635129174099,0.924398614483445,0.649604114888975,0.895133478337407,1.78813219303138,0.841368146639782,0.295379054349154,0.706765149637033,1.143102099825,0.907435666231565,0.584747284438515,0.962118416403295,0.467507608726276,26.5274548829797,15.0950448294364,0.897138566094757,14.941730856403,6.56844619709447,10.1348536743638,12.454310450174,27.4391525221204,16.551879433167,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.59609949360412,0.170733605754134,3.16038732188782,2.93458427679175,2.20612210140017,3.11145418922261,3.29656091582231,2.88827288632634,0.758091635291392,3.29523089857312,2.82939512079114,2.71560371662659,1.85672941974121,2.29741875822453,2.85776214769844,1.62238056322798,1.15745532278223,0.824171801606613,2.50238164228475,3.77156177623957,1.95223386775271,2.62279808942053,2.61623549938191,2.1645157495526,1.86152137361688,1.82927972872773,1.8414879800649,2.8518863907631,0.561142271657738,2.60997039873183,2.06859412988683,1.22769312950907,0.929621047115796,5.78719832943424,8.24374907195222,8.4215379040347,10.5286816483666,4.3996316375834,1.54413993383661,0.231867835620421|short_description=p2@Ccdc120}}
|EntrezGene=54648
|HGNC=
|MCL_coexpression_id=728
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000153925_5end
|description=CAGE_peak_2_at_Ccdc120_5end
|id=chrX:7318414..7318447,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.19e-19!130;UBERON:0000925!1.19e-19!130;UBERON:0006595!1.19e-19!130;UBERON:0001007!6.52e-19!128;UBERON:0001555!6.52e-19!128;UBERON:0007026!6.52e-19!128;UBERON:0004921!7.02e-18!126;UBERON:0004185!7.02e-18!126;UBERON:0005409!1.72e-12!59;UBERON:0000160!5.86e-12!43;UBERON:0000077!7.87e-09!97;UBERON:0005178!3.85e-08!17;UBERON:0005181!3.85e-08!17;UBERON:0002224!3.85e-08!17;UBERON:0000915!3.85e-08!17;UBERON:0008947!3.85e-08!17;UBERON:0003258!3.85e-08!17;UBERON:0001041!2.27e-07!92;UBERON:0005153!2.73e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.45e-12,118;UBERON:0000925,1.45e-12,118;UBERON:0006595,1.45e-12,118;UBERON:0001007,6.22e-12,116;UBERON:0001555,6.22e-12,116;UBERON:0007026,6.22e-12,116;UBERON:0004921,4.66e-11,114;UBERON:0000160,1.41e-09,31;UBERON:0005409,2.71e-09,47;UBERON:0005178,7.81e-09,17;UBERON:0005181,7.81e-09,17;UBERON:0002224,7.81e-09,17;UBERON:0000915,7.81e-09,17;UBERON:0008947,7.81e-09,17;UBERON:0003258,7.81e-09,17;UBERON:0005153,6.78e-08,17;UBERON:0002048,5.88e-07,14;UBERON:0000117,5.88e-07,14;UBERON:0000171,5.88e-07,14;UBERON:0000170,5.88e-07,14;UBERON:0005597,5.88e-07,14;UBERON:0000118,5.88e-07,14
|phase1_expression=0.960893082628764,28.964958834067,29.1199513209303,20.5675663688644,12.5223932486587,4.70061961353291,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,14.0793332058198,12.8469197397615,9.18771142584032,12.0613358924541,12.7128027284675,14.8218267175972,7.56090389279792,8.64748991555688,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0,0,0,0,0.186399445825301,0,0,7.24661221754194,0.860423876981386,9.51959867190851,0.539703191637817,1.29955283489534,0.448026887097336,2.38755514223978,0,0,0,2.81686839553361,0,0,0,18.6182295269644,15.9616715249312,14.6602089054287,5.02409070763864,0,0,0,0.304465478312141,0.230615497256059,0,0.352766121407114,0,25.9554716121093,0.144599356919912,0,0,0,0,13.0474232852686,19.0307518057506,26.3902850584953,13.7946809812639,0,0,0,0,0,0,0,0,0,0,1.73126918545538,3.11017426525233,12.6361379216837,13.8891624885073,0.520481771850815,0,0.540186389416048,1.65775299619287,1.29269348387523,0.512454881139399,0.655912071918102,4.65666067330228,0.862271971731369,0.567318240503458,1.05570674498369,2.19195732427575,5.00485048606076,16.3678518265418,13.1700567301084,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,45.9282108347479,14.2803305998314,0.213288250535234,1.16118335930219,1.80414445850931,1.81515172161008,1.33426826306922,4.37518940058886,14.7104009078799,15.317002789333,11.5614196048124,15.3196483471686,17.3518037536017,15.2799299471218,12.5360068927323,12.5459002150251,0.948339504765408,0.685491075658373,2.25415471346161,1.62921062276251,3.10323979468201,4.76923575254166,4.61626721007078,2.21415221969403,4.23896565171712,3.82531208157582,0.889357881261447,0.166845105716094,0,0.449724224769707,1.01430060694251,1.4470629585145,2.29163266603278,4.60313819921297,7.94462611197673,4.11842119782122,2.87536413054709,4.09355042435354,5.61667811606209,3.53610429125956,2.33216637578486,3.37710464954357,14.041242452662,1.13694847062291,2.77040459951444,3.73439188705414,6.57132695207806,17.7556632888325,24.5184950112594,25.7576415172294,12.1379060961767,13.2878813789265,6.85655505227195,9.99566219766002,10.1884139300878,15.9113964439663,0,0,4.42587845717133,11.313406598494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,1.42452482933804,1.79175655288934,4.28922319728592,1.32745138339963,2.42780636154981,4.83717691143602,3.20628635585027,5.61073596473468,9.53048958626175,11.3708448994017,3.27180356529755,3.56497378384721,3.47640433729398,2.10837217149998,2.06271086496374,5.44703369206061,1.08036656418786,2.58717367565509,1.92903331528433,1.41872186913819,2.49716344642899,2.13913726782757,5.17590413494819,1.87737366450968,20.1240467320629,5.73373834942901,31.9879330706471,26.3187015514326,12.7260271598409,18.2639686324799,18.2196398717018,18.3632927076806,0,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,14.3200592702267,0.790839983952838,4.47302827679067,5.83228840437727,8.78170843260769,10.4814030598165,13.8910276776365,13.3072063717791,13.0877970992015,8.55458823725833,20.5041973318685,0,0,0,0,0,0,0,0.651021924219751,0,0,0.576060012515731,1.89606672376907,1.21635129174099,0.924398614483445,0.649604114888975,0.895133478337407,1.78813219303138,0.841368146639782,0.295379054349154,0.706765149637033,1.143102099825,0.907435666231565,0.584747284438515,0.962118416403295,0.467507608726276,26.5274548829797,15.0950448294364,0.897138566094757,14.941730856403,6.56844619709447,10.1348536743638,12.454310450174,27.4391525221204,16.551879433167,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.59609949360412,0.170733605754134,3.16038732188782,2.93458427679175,2.20612210140017,3.11145418922261,3.29656091582231,2.88827288632634,0.758091635291392,3.29523089857312,2.82939512079114,2.71560371662659,1.85672941974121,2.29741875822453,2.85776214769844,1.62238056322798,1.15745532278223,0.824171801606613,2.50238164228475,3.77156177623957,1.95223386775271,2.62279808942053,2.61623549938191,2.1645157495526,1.86152137361688,1.82927972872773,1.8414879800649,2.8518863907631,0.561142271657738,2.60997039873183,2.06859412988683,1.22769312950907,0.929621047115796,5.78719832943424,8.24374907195222,8.4215379040347,10.5286816483666,4.3996316375834,1.54413993383661,0.231867835620421
|short_description=p2@Ccdc120
}}

Revision as of 20:09, 14 September 2013

Short description:p2@Ccdc120
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ccdc120_5end
Coexpression cluster:MCL_coexpression_mm9:728
Association with transcript: 0bp_to_ENSMUST00000153925_5end
EntrezGene:Ccdc120
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ccdc120

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I629.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I320.57
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.85
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I212.71
Ileum epithelium, pool1.CNhs13199.10252-104B914.82
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G118.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.66
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A825.96
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B219.03
cerebellum, neonate N30.CNhs11135.1395-42I226.39
colon, adult.CNhs10468.36-18H713.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B212.64
eyeball, adult.CNhs10484.31-12G413.89
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B513.17
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I345.93
intestine, adult.CNhs10496.178-9A314.28
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E915.32
intestine, neonate N06.CNhs11102.688-20B811.56
intestine, neonate N07.CNhs11095.720-20F215.32
intestine, neonate N10.CNhs11098.755-23A517.35
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E312.54
intestine, neonate N30.CNhs11131.1384-42G112.55
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G74.77
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F47.94
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B114.04
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A617.76
lung, embryo E18.CNhs10583.1287-20I624.52
lung, neonate N00.CNhs11224.640-42C625.76
lung, neonate N06.CNhs11212.683-20E512.14
lung, neonate N07.CNhs11111.715-19A313.29
lung, neonate N10.CNhs11219.750-23E66.86
lung, neonate N20.CNhs11109.822-18A410.00
lung, neonate N25.CNhs11119.1359-25C710.19
lung, neonate N30.CNhs11133.1394-42H215.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H211.31
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I79.53
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G320.12
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C331.99
skin, neonate N00.CNhs11124.650-25G426.32
skin, neonate N03.CNhs11215.662-22H312.73
skin, neonate N06.CNhs11097.693-20I518.26
skin, neonate N10.CNhs11108.762-6C418.22
small intestine, neonate N16.CNhs11114.790-21I118.36
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D45.83
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C610.48
stomach, neonate N03.CNhs11193.1340-24B813.89
stomach, neonate N07.CNhs11210.718-18A913.31
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I18.55
submandibular gland, adult.CNhs10469.59-29C120.50
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B426.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G514.94
urinary bladder, adult.CNhs10481.879-12E46.57
uterus, adult pregnant day19.CNhs10497.590-15F510.13
uterus, adult.CNhs10509.92-27E512.45
vagina, adult.CNhs10502.89-27D527.44
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C210.53
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.45e-12118
endoderm1.45e-12118
presumptive endoderm1.45e-12118
digestive system6.22e-12116
digestive tract6.22e-12116
primitive gut6.22e-12116
subdivision of digestive tract4.66e-11114
intestine1.41e-0931
gastrointestinal system2.71e-0947
thoracic cavity element7.81e-0917
thoracic segment organ7.81e-0917
thoracic cavity7.81e-0917
thoracic segment of trunk7.81e-0917
respiratory primordium7.81e-0917
endoderm of foregut7.81e-0917
epithelial bud6.78e-0817
lung5.88e-0714
respiratory tube5.88e-0714
respiration organ5.88e-0714
pair of lungs5.88e-0714
lung primordium5.88e-0714
lung bud5.88e-0714







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:7318414..7318447,-&oldid=3066540"