FFCP PHASE1:Mm9::chrX:35577795..35577798,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3751|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:35577795..35577798,-|id=chrX:35577795..35577798,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,9.75e-25,23;CL:0000337,9.75e-25,23;CL:0002614,2.98e-19,3;CL:0002610,6.86e-18,3;CL:0000393,3.38e-17,39;CL:0000211,3.38e-17,39;CL:0000540,6.60e-17,33;CL:0000047,6.60e-17,33;CL:0000031,6.60e-17,33;CL:0000404,6.60e-17,33;CL:0002319,1.06e-12,43;CL:0002611,1.64e-12,2;CL:0000221,2.18e-12,44;CL:0000133,2.18e-12,44;CL:0002612,4.51e-09,3;CL:0002321,5.61e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.35e-08!73;UBERON:0005743!6.35e-08!73;UBERON:0000073!8.16e-08!75;UBERON:0001016!8.16e-08!75;UBERON:0002346!2.45e-07!71;UBERON:0003075!2.45e-07!71;UBERON:0007284!2.45e-07!71;UBERON:0001049!5.98e-07!52;UBERON:0005068!5.98e-07!52;UBERON:0006241!5.98e-07!52;UBERON:0007135!5.98e-07!52;UBERON:0003076!6.02e-07!12;UBERON:0003057!6.02e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.72e-24,6;UBERON:0005174,1.72e-24,6;UBERON:0001137,1.72e-24,6;UBERON:0002038,2.98e-19,3;UBERON:0009663,2.98e-19,3;UBERON:0009661,2.98e-19,3;UBERON:0000125,2.98e-19,3;UBERON:0002308,2.98e-19,3;UBERON:0001948,2.99e-19,5;UBERON:0002315,2.99e-19,5;UBERON:0004684,6.86e-18,3;UBERON:0002275,6.86e-18,3;UBERON:0002950,1.36e-14,4;UBERON:0001891,1.36e-14,4;UBERON:0009616,1.36e-14,4;UBERON:0010286,1.36e-14,4;UBERON:0002256,1.64e-12,2;UBERON:0003076,3.00e-12,12;UBERON:0003057,3.00e-12,12;UBERON:0000073,4.48e-12,54;UBERON:0001017,2.63e-10,73;UBERON:0001016,5.44e-10,75;UBERON:0002257,4.51e-09,3;UBERON:0001049,2.30e-08,52;UBERON:0005068,2.30e-08,52;UBERON:0006241,2.30e-08,52;UBERON:0007135,2.30e-08,52;UBERON:0002020,3.93e-08,34;UBERON:0004121,1.48e-07,95;UBERON:0000924,1.48e-07,95;UBERON:0006601,1.48e-07,95;UBERON:0002420,1.49e-07,8;UBERON:0007245,1.49e-07,8;UBERON:0010009,1.49e-07,8;UBERON:0010011,1.49e-07,8;UBERON:0000454,1.49e-07,8;UBERON:0000489,5.87e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,1.42825492201902,1.10434270475807,0.122490799214954,0,0,1.10115880999389,1.14918604276669,1.84327839907492,0,0.182975287204819,0,2.23346399201105,2.25105044012672,2.90316670775939,2.94628585473668,1.42371680799103,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0,0,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.898743836428936,0,0,0.347648640384553,0,2.0778804455956,0.162241263067758,0.203678727700633,0,0.252722758433675,0,0.390361328888111,0.229902104433473,0.720248519221397,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0.621377317606506,0,0,0.23674473558521,0.983821158737019,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0.403367049246685,0.22237804384487,0.570676878337677,0,0.329397909448022,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0.167506257441816,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0.631016438832513,0,0.646270193198397,0,0,0,0,0.584511715822624,0,0.963963949265421,0.425820255624806,0.178065603667255,0.651547837414304,0,0,0.242780636154981,0.604647113929502,0,0,0,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0.428674070063185,0.709360934569094,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,1.29797711407357,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.474503990371703,1.42323626988794,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0.966336483304024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0.412070114477788,0.962757628775446,0,1.01391719956096,0.377252682772152,0.280924522409647,0.576226371643824,0.287177344778066,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0,0.436039249896986,0.282328141245992,0.169229215783353,0.182927972872773,0,0.814824683075171,0.561142271657738,0.118635018124174,0.29551344712669,0.818462086339379,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0|short_description=p@chrX:35577795..35577798,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3751 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:35577795..35577798,- | |||
|id=chrX:35577795..35577798,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.75e-25,23;CL:0000337,9.75e-25,23;CL:0002614,2.98e-19,3;CL:0002610,6.86e-18,3;CL:0000393,3.38e-17,39;CL:0000211,3.38e-17,39;CL:0000540,6.60e-17,33;CL:0000047,6.60e-17,33;CL:0000031,6.60e-17,33;CL:0000404,6.60e-17,33;CL:0002319,1.06e-12,43;CL:0002611,1.64e-12,2;CL:0000221,2.18e-12,44;CL:0000133,2.18e-12,44;CL:0002612,4.51e-09,3;CL:0002321,5.61e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.35e-08!73;UBERON:0005743!6.35e-08!73;UBERON:0000073!8.16e-08!75;UBERON:0001016!8.16e-08!75;UBERON:0002346!2.45e-07!71;UBERON:0003075!2.45e-07!71;UBERON:0007284!2.45e-07!71;UBERON:0001049!5.98e-07!52;UBERON:0005068!5.98e-07!52;UBERON:0006241!5.98e-07!52;UBERON:0007135!5.98e-07!52;UBERON:0003076!6.02e-07!12;UBERON:0003057!6.02e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.72e-24,6;UBERON:0005174,1.72e-24,6;UBERON:0001137,1.72e-24,6;UBERON:0002038,2.98e-19,3;UBERON:0009663,2.98e-19,3;UBERON:0009661,2.98e-19,3;UBERON:0000125,2.98e-19,3;UBERON:0002308,2.98e-19,3;UBERON:0001948,2.99e-19,5;UBERON:0002315,2.99e-19,5;UBERON:0004684,6.86e-18,3;UBERON:0002275,6.86e-18,3;UBERON:0002950,1.36e-14,4;UBERON:0001891,1.36e-14,4;UBERON:0009616,1.36e-14,4;UBERON:0010286,1.36e-14,4;UBERON:0002256,1.64e-12,2;UBERON:0003076,3.00e-12,12;UBERON:0003057,3.00e-12,12;UBERON:0000073,4.48e-12,54;UBERON:0001017,2.63e-10,73;UBERON:0001016,5.44e-10,75;UBERON:0002257,4.51e-09,3;UBERON:0001049,2.30e-08,52;UBERON:0005068,2.30e-08,52;UBERON:0006241,2.30e-08,52;UBERON:0007135,2.30e-08,52;UBERON:0002020,3.93e-08,34;UBERON:0004121,1.48e-07,95;UBERON:0000924,1.48e-07,95;UBERON:0006601,1.48e-07,95;UBERON:0002420,1.49e-07,8;UBERON:0007245,1.49e-07,8;UBERON:0010009,1.49e-07,8;UBERON:0010011,1.49e-07,8;UBERON:0000454,1.49e-07,8;UBERON:0000489,5.87e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,1.42825492201902,1.10434270475807,0.122490799214954,0,0,1.10115880999389,1.14918604276669,1.84327839907492,0,0.182975287204819,0,2.23346399201105,2.25105044012672,2.90316670775939,2.94628585473668,1.42371680799103,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0,0,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.898743836428936,0,0,0.347648640384553,0,2.0778804455956,0.162241263067758,0.203678727700633,0,0.252722758433675,0,0.390361328888111,0.229902104433473,0.720248519221397,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0.621377317606506,0,0,0.23674473558521,0.983821158737019,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0.403367049246685,0.22237804384487,0.570676878337677,0,0.329397909448022,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0.167506257441816,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0.631016438832513,0,0.646270193198397,0,0,0,0,0.584511715822624,0,0.963963949265421,0.425820255624806,0.178065603667255,0.651547837414304,0,0,0.242780636154981,0.604647113929502,0,0,0,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0.428674070063185,0.709360934569094,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,1.29797711407357,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.474503990371703,1.42323626988794,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0.966336483304024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0.412070114477788,0.962757628775446,0,1.01391719956096,0.377252682772152,0.280924522409647,0.576226371643824,0.287177344778066,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0,0.436039249896986,0.282328141245992,0.169229215783353,0.182927972872773,0,0.814824683075171,0.561142271657738,0.118635018124174,0.29551344712669,0.818462086339379,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chrX:35577795..35577798,- | |||
}} |
Revision as of 19:47, 14 September 2013
Short description: | p@chrX:35577795..35577798, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:35577795..35577798, - |
Coexpression cluster: | MCL_coexpression_mm9:3751 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.75e-25 | 23 |
neuroblast (sensu Vertebrata) | 9.75e-25 | 23 |
neuron of the substantia nigra | 2.98e-19 | 3 |
raphe nuclei neuron | 6.86e-18 | 3 |
electrically responsive cell | 3.38e-17 | 39 |
electrically active cell | 3.38e-17 | 39 |
neuron | 6.60e-17 | 33 |
neuronal stem cell | 6.60e-17 | 33 |
neuroblast | 6.60e-17 | 33 |
electrically signaling cell | 6.60e-17 | 33 |
neural cell | 1.06e-12 | 43 |
neuron of the dorsal spinal cord | 1.64e-12 | 2 |
ectodermal cell | 2.18e-12 | 44 |
neurectodermal cell | 2.18e-12 | 44 |
neuron of the ventral spinal cord | 4.51e-09 | 3 |
embryonic cell | 5.61e-09 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.