FFCP PHASE1:Mm9::chrX:156380932..156380965,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=58194|HGNC=|MCL_coexpression_id=10|UniProt=|association_with_transcript=0bp_to_ENSMUST00000130987_5end|description=CAGE_peak_6_at_Sh3kbp1_5end|id=chrX:156380932..156380965,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.16e-16!18;UBERON:0000948!2.16e-16!18;UBERON:0005498!2.16e-16!18;UBERON:0004140!2.16e-16!18;UBERON:0009881!2.16e-16!18;UBERON:0004141!2.16e-16!18;UBERON:0003084!2.16e-16!18;UBERON:0007005!2.16e-16!18;UBERON:0004139!2.16e-16!18;UBERON:0004291!2.16e-16!18;UBERON:0004535!1.35e-12!23;UBERON:0001009!1.35e-12!23;UBERON:0004872!9.22e-08!33;UBERON:0003103!4.22e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.09e-21,18;UBERON:0000948,1.09e-21,18;UBERON:0005498,1.09e-21,18;UBERON:0004140,1.09e-21,18;UBERON:0009881,1.09e-21,18;UBERON:0004141,1.09e-21,18;UBERON:0003084,1.09e-21,18;UBERON:0007005,1.09e-21,18;UBERON:0004139,1.09e-21,18;UBERON:0004291,1.09e-21,18;UBERON:0004535,7.61e-16,23;UBERON:0001009,7.61e-16,23;UBERON:0004872,8.59e-11,33;UBERON:0003103,2.97e-08,43;UBERON:0005418,2.46e-07,5;UBERON:0002472,2.46e-07,5;UBERON:0008784,2.46e-07,5;UBERON:0006058,2.46e-07,5;UBERON:0004709,2.46e-07,5;UBERON:0002529,2.46e-07,5;UBERON:0010538,2.46e-07,5;UBERON:0005420,2.46e-07,5;UBERON:0010758,2.46e-07,5;UBERON:0000978,2.46e-07,5;UBERON:0002103,2.46e-07,5;UBERON:0000376,2.46e-07,5;UBERON:0000154,2.46e-07,5;UBERON:0010709,2.46e-07,5;UBERON:0005730,2.46e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,7.3031098468511,0,0.519572009205738,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0.922461989024234,0,0,0,0,0.433798070759735,5.30766331169925,1.61766849947409,6.18356251689102,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23932547098167,0,2.10441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,1.81092359517311,0,0,0,0,0,0.348252166522167,0,0,0,0,0,8.69928244649108,5.8631514995274,7.38254451990161,14.678173606283,21.447301260467,24.2199367233184,41.3910421655726,49.6305792589296,42.2690539369154,83.7609636059615,95.3812966299543,84.31156192769,92.6907920276607,123.167614678279,50.7300262914205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.814605311381257,0,0,0,0,0,0,0,0.667380422864376,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.896987067609561,0,0.554259570499814,0.37898282354097,0.977789858652155,0,0,1.50755631697634,0.238043640886014,0,0.472905432318573,0.44292937929755,0.318909537314974,1.14704320301017,1.89953480052485,0.289298117163023,0,0,0,0,0,0,0,16.1581393410799,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,1.15420377059036,0.322928853391811,0.180938774784468,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0,0,0,15.8711268530648,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0.243106717068294,0.209613162627982,1.10306105070008,3.55594764482584,2.88449080134452,5.77654577265267,4.04315538822076,3.04175159868288,3.58390048633545,2.99652823903624,2.75308155340938,2.29741875822453,2.38146845641537,2.20180219295225,1.73618298417335,3.70877310722976,3.23837624295674,3.77156177623957,2.30718548007139,3.33810665926249,2.90692833264657,2.07040636913727,2.03075058940024,2.37806364734604,2.63069711437843,2.98769050460896,2.80571135828869,2.13543032623513,1.87158516513571,1.22769312950907,1.85924209423159,1.73615949883027,2.99772693525535,1.87145286756327,2.14871054048298,1.53030665655075,3.75005412503176,5.56482805489012|short_description=p6@Sh3kbp1}} | ||
|EntrezGene=58194 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000130987_5end | |||
|description=CAGE_peak_6_at_Sh3kbp1_5end | |||
|id=chrX:156380932..156380965,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.16e-16!18;UBERON:0000948!2.16e-16!18;UBERON:0005498!2.16e-16!18;UBERON:0004140!2.16e-16!18;UBERON:0009881!2.16e-16!18;UBERON:0004141!2.16e-16!18;UBERON:0003084!2.16e-16!18;UBERON:0007005!2.16e-16!18;UBERON:0004139!2.16e-16!18;UBERON:0004291!2.16e-16!18;UBERON:0004535!1.35e-12!23;UBERON:0001009!1.35e-12!23;UBERON:0004872!9.22e-08!33;UBERON:0003103!4.22e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.09e-21,18;UBERON:0000948,1.09e-21,18;UBERON:0005498,1.09e-21,18;UBERON:0004140,1.09e-21,18;UBERON:0009881,1.09e-21,18;UBERON:0004141,1.09e-21,18;UBERON:0003084,1.09e-21,18;UBERON:0007005,1.09e-21,18;UBERON:0004139,1.09e-21,18;UBERON:0004291,1.09e-21,18;UBERON:0004535,7.61e-16,23;UBERON:0001009,7.61e-16,23;UBERON:0004872,8.59e-11,33;UBERON:0003103,2.97e-08,43;UBERON:0005418,2.46e-07,5;UBERON:0002472,2.46e-07,5;UBERON:0008784,2.46e-07,5;UBERON:0006058,2.46e-07,5;UBERON:0004709,2.46e-07,5;UBERON:0002529,2.46e-07,5;UBERON:0010538,2.46e-07,5;UBERON:0005420,2.46e-07,5;UBERON:0010758,2.46e-07,5;UBERON:0000978,2.46e-07,5;UBERON:0002103,2.46e-07,5;UBERON:0000376,2.46e-07,5;UBERON:0000154,2.46e-07,5;UBERON:0010709,2.46e-07,5;UBERON:0005730,2.46e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,7.3031098468511,0,0.519572009205738,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0.922461989024234,0,0,0,0,0.433798070759735,5.30766331169925,1.61766849947409,6.18356251689102,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23932547098167,0,2.10441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,1.81092359517311,0,0,0,0,0,0.348252166522167,0,0,0,0,0,8.69928244649108,5.8631514995274,7.38254451990161,14.678173606283,21.447301260467,24.2199367233184,41.3910421655726,49.6305792589296,42.2690539369154,83.7609636059615,95.3812966299543,84.31156192769,92.6907920276607,123.167614678279,50.7300262914205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.814605311381257,0,0,0,0,0,0,0,0.667380422864376,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.896987067609561,0,0.554259570499814,0.37898282354097,0.977789858652155,0,0,1.50755631697634,0.238043640886014,0,0.472905432318573,0.44292937929755,0.318909537314974,1.14704320301017,1.89953480052485,0.289298117163023,0,0,0,0,0,0,0,16.1581393410799,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,1.15420377059036,0.322928853391811,0.180938774784468,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0,0,0,15.8711268530648,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0.243106717068294,0.209613162627982,1.10306105070008,3.55594764482584,2.88449080134452,5.77654577265267,4.04315538822076,3.04175159868288,3.58390048633545,2.99652823903624,2.75308155340938,2.29741875822453,2.38146845641537,2.20180219295225,1.73618298417335,3.70877310722976,3.23837624295674,3.77156177623957,2.30718548007139,3.33810665926249,2.90692833264657,2.07040636913727,2.03075058940024,2.37806364734604,2.63069711437843,2.98769050460896,2.80571135828869,2.13543032623513,1.87158516513571,1.22769312950907,1.85924209423159,1.73615949883027,2.99772693525535,1.87145286756327,2.14871054048298,1.53030665655075,3.75005412503176,5.56482805489012 | |||
|short_description=p6@Sh3kbp1 | |||
}} |
Revision as of 19:35, 14 September 2013
Short description: | p6@Sh3kbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sh3kbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 0bp_to_ENSMUST00000130987_5end |
EntrezGene: | Sh3kbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.09e-21 | 18 |
heart | 1.09e-21 | 18 |
primitive heart tube | 1.09e-21 | 18 |
primary heart field | 1.09e-21 | 18 |
anterior lateral plate mesoderm | 1.09e-21 | 18 |
heart tube | 1.09e-21 | 18 |
heart primordium | 1.09e-21 | 18 |
cardiac mesoderm | 1.09e-21 | 18 |
cardiogenic plate | 1.09e-21 | 18 |
heart rudiment | 1.09e-21 | 18 |
cardiovascular system | 7.61e-16 | 23 |
circulatory system | 7.61e-16 | 23 |
splanchnic layer of lateral plate mesoderm | 8.59e-11 | 33 |
compound organ | 2.97e-08 | 43 |
hindlimb bud | 2.46e-07 | 5 |
stylopod | 2.46e-07 | 5 |
lower limb segment | 2.46e-07 | 5 |
multi-limb segment region | 2.46e-07 | 5 |
pelvic appendage | 2.46e-07 | 5 |
limb segment | 2.46e-07 | 5 |
paired limb/fin segment | 2.46e-07 | 5 |
pelvic appendage bud | 2.46e-07 | 5 |
subdivision of organism along appendicular axis | 2.46e-07 | 5 |
leg | 2.46e-07 | 5 |
hindlimb | 2.46e-07 | 5 |
hindlimb stylopod | 2.46e-07 | 5 |
posterior region of body | 2.46e-07 | 5 |
pelvic complex | 2.46e-07 | 5 |
hindlimb/pelvic fin field | 2.46e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.