FFCP PHASE1:Mm9::chr9:64949111..64949149,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56741|HGNC=|MCL_coexpression_id=87|UniProt=Q9EQS9,E9QAQ0|association_with_transcript=-143bp_to_ENSMUST00000035499,ENSMUST00000077696_5end|description=CAGE_peak_2_at_Igdcc4_5end|id=chr9:64949111..64949149,+|ontology_enrichment_celltype=CL:0000117!1.60e-15!23;CL:0000337!1.60e-15!23;CL:0000540!1.91e-13!33;CL:0000047!1.91e-13!33;CL:0000031!1.91e-13!33;CL:0000404!1.91e-13!33;CL:0000221!2.12e-11!44;CL:0000133!2.12e-11!44;CL:0002319!5.09e-11!43;CL:0000393!9.94e-10!39;CL:0000211!9.94e-10!39;CL:0000055!8.68e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-23,23;CL:0000337,1.76e-23,23;CL:0000540,3.09e-15,33;CL:0000047,3.09e-15,33;CL:0000031,3.09e-15,33;CL:0000404,3.09e-15,33;CL:0000221,1.99e-12,44;CL:0000133,1.99e-12,44;CL:0002319,6.97e-12,43;CL:0000393,1.54e-11,39;CL:0000211,1.54e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.08e-21!73;UBERON:0005743!1.08e-21!73;UBERON:0000073!1.78e-20!75;UBERON:0001016!1.78e-20!75;UBERON:0002346!1.83e-20!71;UBERON:0003075!1.83e-20!71;UBERON:0007284!1.83e-20!71;UBERON:0000033!1.84e-20!63;UBERON:0001049!4.34e-19!52;UBERON:0005068!4.34e-19!52;UBERON:0006241!4.34e-19!52;UBERON:0007135!4.34e-19!52;UBERON:0004121!8.37e-19!102;UBERON:0000924!8.37e-19!102;UBERON:0006601!8.37e-19!102;UBERON:0000955!4.02e-17!50;UBERON:0006238!4.02e-17!50;UBERON:0003056!4.75e-17!49;UBERON:0002616!6.38e-17!49;UBERON:0002020!3.44e-14!34;UBERON:0003080!2.92e-13!40;UBERON:0002780!1.03e-12!39;UBERON:0001890!1.03e-12!39;UBERON:0006240!1.03e-12!39;UBERON:0000153!3.12e-11!94;UBERON:0002791!8.48e-11!29;UBERON:0003528!8.48e-11!29;UBERON:0001893!8.48e-11!29;UBERON:0007811!4.19e-10!86;UBERON:0000468!1.15e-08!333;UBERON:0003076!9.53e-07!12;UBERON:0003057!9.53e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.58e-24,64;UBERON:0003075,3.58e-24,64;UBERON:0007284,3.58e-24,64;UBERON:0000073,8.57e-23,54;UBERON:0010371,1.10e-21,73;UBERON:0001049,8.62e-21,52;UBERON:0005068,8.62e-21,52;UBERON:0006241,8.62e-21,52;UBERON:0007135,8.62e-21,52;UBERON:0004121,1.16e-20,95;UBERON:0000924,1.16e-20,95;UBERON:0006601,1.16e-20,95;UBERON:0001017,2.16e-20,73;UBERON:0001016,2.04e-19,75;UBERON:0003056,1.07e-18,49;UBERON:0002020,3.19e-17,34;UBERON:0002616,3.24e-15,46;UBERON:0000955,1.17e-14,47;UBERON:0006238,1.17e-14,47;UBERON:0010314,7.09e-14,92;UBERON:0003080,8.99e-14,40;UBERON:0002780,5.17e-13,39;UBERON:0001890,5.17e-13,39;UBERON:0006240,5.17e-13,39;UBERON:0003528,2.79e-12,29;UBERON:0002791,2.79e-12,29;UBERON:0001893,2.79e-12,29;UBERON:0002420,1.35e-08,8;UBERON:0007245,1.35e-08,8;UBERON:0010009,1.35e-08,8;UBERON:0010011,1.35e-08,8;UBERON:0000454,1.35e-08,8;UBERON:0003076,5.05e-08,12;UBERON:0003057,5.05e-08,12;UBERON:0002240,1.02e-07,6;UBERON:0005174,1.02e-07,6;UBERON:0001137,1.02e-07,6;UBERON:0001948,5.10e-07,5;UBERON:0002315,5.10e-07,5|phase1_expression=3.04282809499109,0,0,0,0,0.16787927191189,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,4.69434806608824,0.65407546914134,0.219686182734472,0.194429899074283,0.839918529752175,0,0,0,0,0,0,0,5.46254444320914,4.7609188134483,6.33831403506179,0.338844532069132,0,0,0,0,1.49800055259202,0,1.76272340924412,2.29510095163874,1.89292465216244,6.28432165688368,3.75476519617743,2.57230678351403,1.0543001812006,2.75765635983006,3.30347642998166,2.93680877595932,2.76491759861238,6.4624280987795,5.48925861614458,3.64639359389732,3.07101298901519,5.6276261003168,2.29197371665215,8.83885756421003,4.6982654663704,7.45597783301202,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0.593768556259299,0.693941307064543,0,0.230615497256059,0.452167921657868,0.352766121407114,0.376999773989026,0,0,0,0.647067399789637,0,0.484875253135222,0,1.46390398505774,0.41889341362691,0,0,0,0,2.39665023047716,1.37250180845588,1.7591609295801,1.91206752211504,1.02286182932132,2.0778804455956,1.94689515681309,0.407357455401265,0.248813941220186,0,0.420883711772948,1.30120442962704,2.06911893990126,3.06105620669094,1.50704817835715,2.72145996605311,2.8185018462667,3.18585863503078,1.03481348295606,1.07783996466421,1.89106080167819,1.40760899331159,1.7535658594206,0.556094498451196,0.696504333044333,0.411564272815887,1.39323986772945,0,0,0,0.414251545071004,0.234526059981096,0.900310307305074,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.493679549740441,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,0.841159794256509,1.3377599609307,0,0,1.06644125267617,1.16118335930219,1.03093969057675,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,0,0.407302655690628,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0,0,0.33369021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| ||
|EntrezGene=56741 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt=Q9EQS9,E9QAQ0 | |||
|association_with_transcript=-143bp_to_ENSMUST00000035499,ENSMUST00000077696_5end | |||
|description=CAGE_peak_2_at_Igdcc4_5end | |||
|id=chr9:64949111..64949149,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.60e-15!23;CL:0000337!1.60e-15!23;CL:0000540!1.91e-13!33;CL:0000047!1.91e-13!33;CL:0000031!1.91e-13!33;CL:0000404!1.91e-13!33;CL:0000221!2.12e-11!44;CL:0000133!2.12e-11!44;CL:0002319!5.09e-11!43;CL:0000393!9.94e-10!39;CL:0000211!9.94e-10!39;CL:0000055!8.68e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-23,23;CL:0000337,1.76e-23,23;CL:0000540,3.09e-15,33;CL:0000047,3.09e-15,33;CL:0000031,3.09e-15,33;CL:0000404,3.09e-15,33;CL:0000221,1.99e-12,44;CL:0000133,1.99e-12,44;CL:0002319,6.97e-12,43;CL:0000393,1.54e-11,39;CL:0000211,1.54e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-21!73;UBERON:0005743!1.08e-21!73;UBERON:0000073!1.78e-20!75;UBERON:0001016!1.78e-20!75;UBERON:0002346!1.83e-20!71;UBERON:0003075!1.83e-20!71;UBERON:0007284!1.83e-20!71;UBERON:0000033!1.84e-20!63;UBERON:0001049!4.34e-19!52;UBERON:0005068!4.34e-19!52;UBERON:0006241!4.34e-19!52;UBERON:0007135!4.34e-19!52;UBERON:0004121!8.37e-19!102;UBERON:0000924!8.37e-19!102;UBERON:0006601!8.37e-19!102;UBERON:0000955!4.02e-17!50;UBERON:0006238!4.02e-17!50;UBERON:0003056!4.75e-17!49;UBERON:0002616!6.38e-17!49;UBERON:0002020!3.44e-14!34;UBERON:0003080!2.92e-13!40;UBERON:0002780!1.03e-12!39;UBERON:0001890!1.03e-12!39;UBERON:0006240!1.03e-12!39;UBERON:0000153!3.12e-11!94;UBERON:0002791!8.48e-11!29;UBERON:0003528!8.48e-11!29;UBERON:0001893!8.48e-11!29;UBERON:0007811!4.19e-10!86;UBERON:0000468!1.15e-08!333;UBERON:0003076!9.53e-07!12;UBERON:0003057!9.53e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.58e-24,64;UBERON:0003075,3.58e-24,64;UBERON:0007284,3.58e-24,64;UBERON:0000073,8.57e-23,54;UBERON:0010371,1.10e-21,73;UBERON:0001049,8.62e-21,52;UBERON:0005068,8.62e-21,52;UBERON:0006241,8.62e-21,52;UBERON:0007135,8.62e-21,52;UBERON:0004121,1.16e-20,95;UBERON:0000924,1.16e-20,95;UBERON:0006601,1.16e-20,95;UBERON:0001017,2.16e-20,73;UBERON:0001016,2.04e-19,75;UBERON:0003056,1.07e-18,49;UBERON:0002020,3.19e-17,34;UBERON:0002616,3.24e-15,46;UBERON:0000955,1.17e-14,47;UBERON:0006238,1.17e-14,47;UBERON:0010314,7.09e-14,92;UBERON:0003080,8.99e-14,40;UBERON:0002780,5.17e-13,39;UBERON:0001890,5.17e-13,39;UBERON:0006240,5.17e-13,39;UBERON:0003528,2.79e-12,29;UBERON:0002791,2.79e-12,29;UBERON:0001893,2.79e-12,29;UBERON:0002420,1.35e-08,8;UBERON:0007245,1.35e-08,8;UBERON:0010009,1.35e-08,8;UBERON:0010011,1.35e-08,8;UBERON:0000454,1.35e-08,8;UBERON:0003076,5.05e-08,12;UBERON:0003057,5.05e-08,12;UBERON:0002240,1.02e-07,6;UBERON:0005174,1.02e-07,6;UBERON:0001137,1.02e-07,6;UBERON:0001948,5.10e-07,5;UBERON:0002315,5.10e-07,5 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0.16787927191189,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,4.69434806608824,0.65407546914134,0.219686182734472,0.194429899074283,0.839918529752175,0,0,0,0,0,0,0,5.46254444320914,4.7609188134483,6.33831403506179,0.338844532069132,0,0,0,0,1.49800055259202,0,1.76272340924412,2.29510095163874,1.89292465216244,6.28432165688368,3.75476519617743,2.57230678351403,1.0543001812006,2.75765635983006,3.30347642998166,2.93680877595932,2.76491759861238,6.4624280987795,5.48925861614458,3.64639359389732,3.07101298901519,5.6276261003168,2.29197371665215,8.83885756421003,4.6982654663704,7.45597783301202,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0.593768556259299,0.693941307064543,0,0.230615497256059,0.452167921657868,0.352766121407114,0.376999773989026,0,0,0,0.647067399789637,0,0.484875253135222,0,1.46390398505774,0.41889341362691,0,0,0,0,2.39665023047716,1.37250180845588,1.7591609295801,1.91206752211504,1.02286182932132,2.0778804455956,1.94689515681309,0.407357455401265,0.248813941220186,0,0.420883711772948,1.30120442962704,2.06911893990126,3.06105620669094,1.50704817835715,2.72145996605311,2.8185018462667,3.18585863503078,1.03481348295606,1.07783996466421,1.89106080167819,1.40760899331159,1.7535658594206,0.556094498451196,0.696504333044333,0.411564272815887,1.39323986772945,0,0,0,0.414251545071004,0.234526059981096,0.900310307305074,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.493679549740441,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,0.841159794256509,1.3377599609307,0,0,1.06644125267617,1.16118335930219,1.03093969057675,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,0,0.407302655690628,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0.287696137450811,0,0,2.87536413054709,0.744281895337007,0.312037673114561,0,0,0,0,1.13694847062291,0.488894929326078,0.509235257325564,0.704070744865506,0.670025029767263,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0,1.60550589987792,1.64096361229084,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0.876767573733936,0.790575555893047,0.963963949265421,0.567760340833074,1.78065603667255,1.14020871547503,1.48473110675282,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,1.36175842301515,1.44048875225048,0.517434735131018,1.28602221018955,1.06404140185364,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0,0.968786560175433,0.120625849856312,0,0,0,2.03967832211561,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0,2.05618395827738,1.42323626988794,0.540026704109006,0.627264888043406,0.436725127492355,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,1.49516546043979,0.330916980914195,1.75006069509643,0.387479470433193,1.18269287843545,1.05621514781179,0.911430693907651,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.616265742988964,0.51968329191118,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.915758121336325,0.214368379079066,0,0.564751842617067,0.460325236507177,1.14579102687879,1.20297227640581,1.37016503954128,0.755393897389701,1.35004500046361,1.80128481289688,1.35942722695261,3.10656187051092,0.518936737920883,2.39414924040619,0.853668028770671,2.43106717068294,1.25767897576789,1.65459157605013,1.11123363900808,0.618105171716683,1.28367683836726,1.76888048234658,0.760437899670719,2.45214243801899,1.31098110457835,1.92075457214608,1.14870937911227,0.952587382566147,2.0859178670074,1.54327376370964,0.412085900803307,1.17759136107518,0.342869252385415,0.70990322463735,0.953744759789284,2.0348498328526,1.03520318456864,0.676916863133412,1.09756783723664,0.789209134313529,0.814824683075171,3.36685362994643,1.77952527186261,2.06859412988683,0.409231043169689,2.16911577660352,1.35034627686799,1.74867404556562,1.87145286756327,0.429742108096597,2.10417165275728,0.661774257358546,0.231867835620421 | |||
|short_description=p2@Igdcc4 | |||
}} |
Revision as of 18:31, 14 September 2013
Short description: | p2@Igdcc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Igdcc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -143bp_to_ENSMUST00000035499, ENSMUST00000077696_5end |
EntrezGene: | Igdcc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.76e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-23 | 23 |
neuron | 3.09e-15 | 33 |
neuronal stem cell | 3.09e-15 | 33 |
neuroblast | 3.09e-15 | 33 |
electrically signaling cell | 3.09e-15 | 33 |
ectodermal cell | 1.99e-12 | 44 |
neurectodermal cell | 1.99e-12 | 44 |
neural cell | 6.97e-12 | 43 |
electrically responsive cell | 1.54e-11 | 39 |
electrically active cell | 1.54e-11 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.