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FFCP PHASE1:Mm9::chr9:37421391..37421443,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=22619|HGNC=|MCL_coexpression_id=265|UniProt=P70665|association_with_transcript=0bp_to_ENSMUST00000002007,NM_011734,uc009ove.1,uc009ovf.1_5end|description=CAGE_peak_1_at_Siae_5end|id=chr9:37421391..37421443,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.79e-11!130;UBERON:0000925!2.79e-11!130;UBERON:0006595!2.79e-11!130;UBERON:0001007!1.97e-10!128;UBERON:0001555!1.97e-10!128;UBERON:0007026!1.97e-10!128;UBERON:0004921!7.97e-10!126;UBERON:0004185!7.97e-10!126;UBERON:0000466!9.20e-09!79;UBERON:0000160!6.12e-08!43;UBERON:0005409!8.58e-08!59;UBERON:0000480!1.54e-07!308;UBERON:0000467!1.54e-07!308;UBERON:0000926!2.73e-07!193;UBERON:0004120!2.73e-07!193;UBERON:0006603!2.73e-07!193;UBERON:0003133!5.12e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.36e-12,118;UBERON:0000925,6.36e-12,118;UBERON:0006595,6.36e-12,118;UBERON:0001007,4.81e-11,116;UBERON:0001555,4.81e-11,116;UBERON:0007026,4.81e-11,116;UBERON:0004921,2.04e-10,114;UBERON:0000160,2.88e-10,31;UBERON:0005409,3.07e-09,47;UBERON:0003133,5.12e-07,24|phase1_expression=8.80818659076367,9.77131141390211,11.3749809847384,20.5675663688644,19.5349334679075,7.55456723603504,8.87728034262997,6.71441281896197,0.422366166455,0.468129052643987,0.513653904676515,0.638177271962691,7.53283211697305,8.91688104673774,5.3297561890506,5.4668322195253,2.79824751251259,8.20201629931418,8.91243818437302,8.06340338416257,11.4808441703944,12.3120779489098,14.6271881917804,12.6394014006791,13.0763290208287,10.3361753540704,10.7690499039769,9.69620547086501,43.3253396360533,34.5281277771105,8.64748991555688,2.54012269383853,3.07532393792285,0,13.2871745085586,10.805251948302,8.98345167554424,2.09265815368454,3.906676722619,1.57057123192139,1.17646297606203,0,0.971020706062307,10.3235390739973,7.70464677268311,7.34187008646726,2.34717403304412,3.48840250208714,4.83309602015838,4.27745777963423,7.55926676776958,2.87505128729943,5.70460860596304,8.70434570413613,8.06625117941913,6.94600477297057,10.0286703978565,7.21940929188419,1.41621522601718,2.64495489636016,2.53532561402472,2.71075625655306,5.33576877666684,4.49949858640699,10.8775299882367,6.3943210345149,2.69640099466564,4.2264013585371,1.76272340924412,1.89008313664367,1.47227472945967,3.99911378165325,4.63823935998388,1.5923803897944,1.53352753629178,0.919218786610021,6.60695285996332,6.38436690425939,6.75868746327471,1.58263545276233,2.8361169516747,4.16730696445408,9.77140496504833,5.06486349028512,7.48711414106369,4.41942878210502,4.41352210477219,2.60959224155421,0.530083353332288,5.29000920747499,9.85539261585705,15.487629785665,10.1995700056163,28.6042691568043,31.8390444549358,29.1217476613268,13.0613310722529,6.64678258054425,6.75443611967459,6.00677276667578,7.60554466794075,5.13305909657271,0,0,5.41227602528035,9.62767488805375,6.0662933401774,18.2694207550496,15.5362730188303,17.0708459924548,6.59244241711316,7.30717147949139,7.84092690670599,11.0027527603414,13.4051126134703,13.1949920896159,17.7980376768749,11.7125479105128,2.65383165584962,5.3383060482645,7.06692859073259,8.24287930329878,1.86391761218122,3.51336956413857,3.77004072264219,21.4583926375217,10.6635460810269,7.19883277192089,10.2926883929182,7.63932260964596,4.57500602818627,3.5183218591602,6.60532416730651,7.41574826257959,9.55825004973976,5.84068547043927,11.1004906596845,8.70848794270651,15.9215337813215,10.1012090825508,3.25301107406759,4.36813998423599,4.50155324513373,5.12396380641431,5.03470093719826,5.38077625196369,3.93547243150861,6.46758426847539,2.15567992932842,3.40390944302075,4.39877810409872,5.69908904311695,5.83899223373756,9.05455632957633,5.14455341019859,8.55847347319521,2.80885274925294,6.17634977075316,10.7982129770325,4.97101854085205,4.69052119962192,6.84235833551856,7.10234206755631,4.9191057936851,6.47921874126989,5.58081467400979,6.17028823219124,4.67061369468678,4.77223564749093,9.35754545250843,6.97191762094359,9.21059920779594,10.5384055339704,7.78397228810156,7.78072809687271,4.32199371992995,36.3460661282178,11.9002754998595,6.61193576659225,4.87697010906921,8.63411990858025,10.8909103296605,19.1245117706588,26.0609107774206,23.2519240156811,32.6103930353542,22.6201687920243,22.2831248686089,21.4460495831032,25.1669434423182,30.9077411320813,30.2694735346638,3.41402221715547,5.9409226557059,7.88954149711563,4.68398054044223,8.72786192254316,6.0316805105674,15.6826612068158,19.3369293853279,19.9388384358546,17.5223972768957,33.795599487935,6.17326891149548,7.27268281918851,8.7696223830093,7.1001042485976,6.75296047306767,5.60176873919124,5.75392274901621,7.45822043165163,9.88421087477093,17.2521847832825,23.4448797031157,26.5232022147376,31.0672019874947,35.5206878773386,43.419916922703,8.49864674766381,3.7898282354097,7.00749398700711,6.28056817368196,6.33663670378956,11.0554129911598,7.85544014923845,5.65887578787617,7.09358148477859,9.30151696524855,9.4078313507917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|EntrezGene=22619
|HGNC=
|MCL_coexpression_id=265
|UniProt=P70665
|association_with_transcript=0bp_to_ENSMUST00000002007,NM_011734,uc009ove.1,uc009ovf.1_5end
|description=CAGE_peak_1_at_Siae_5end
|id=chr9:37421391..37421443,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.79e-11!130;UBERON:0000925!2.79e-11!130;UBERON:0006595!2.79e-11!130;UBERON:0001007!1.97e-10!128;UBERON:0001555!1.97e-10!128;UBERON:0007026!1.97e-10!128;UBERON:0004921!7.97e-10!126;UBERON:0004185!7.97e-10!126;UBERON:0000466!9.20e-09!79;UBERON:0000160!6.12e-08!43;UBERON:0005409!8.58e-08!59;UBERON:0000480!1.54e-07!308;UBERON:0000467!1.54e-07!308;UBERON:0000926!2.73e-07!193;UBERON:0004120!2.73e-07!193;UBERON:0006603!2.73e-07!193;UBERON:0003133!5.12e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.36e-12,118;UBERON:0000925,6.36e-12,118;UBERON:0006595,6.36e-12,118;UBERON:0001007,4.81e-11,116;UBERON:0001555,4.81e-11,116;UBERON:0007026,4.81e-11,116;UBERON:0004921,2.04e-10,114;UBERON:0000160,2.88e-10,31;UBERON:0005409,3.07e-09,47;UBERON:0003133,5.12e-07,24
|phase1_expression=8.80818659076367,9.77131141390211,11.3749809847384,20.5675663688644,19.5349334679075,7.55456723603504,8.87728034262997,6.71441281896197,0.422366166455,0.468129052643987,0.513653904676515,0.638177271962691,7.53283211697305,8.91688104673774,5.3297561890506,5.4668322195253,2.79824751251259,8.20201629931418,8.91243818437302,8.06340338416257,11.4808441703944,12.3120779489098,14.6271881917804,12.6394014006791,13.0763290208287,10.3361753540704,10.7690499039769,9.69620547086501,43.3253396360533,34.5281277771105,8.64748991555688,2.54012269383853,3.07532393792285,0,13.2871745085586,10.805251948302,8.98345167554424,2.09265815368454,3.906676722619,1.57057123192139,1.17646297606203,0,0.971020706062307,10.3235390739973,7.70464677268311,7.34187008646726,2.34717403304412,3.48840250208714,4.83309602015838,4.27745777963423,7.55926676776958,2.87505128729943,5.70460860596304,8.70434570413613,8.06625117941913,6.94600477297057,10.0286703978565,7.21940929188419,1.41621522601718,2.64495489636016,2.53532561402472,2.71075625655306,5.33576877666684,4.49949858640699,10.8775299882367,6.3943210345149,2.69640099466564,4.2264013585371,1.76272340924412,1.89008313664367,1.47227472945967,3.99911378165325,4.63823935998388,1.5923803897944,1.53352753629178,0.919218786610021,6.60695285996332,6.38436690425939,6.75868746327471,1.58263545276233,2.8361169516747,4.16730696445408,9.77140496504833,5.06486349028512,7.48711414106369,4.41942878210502,4.41352210477219,2.60959224155421,0.530083353332288,5.29000920747499,9.85539261585705,15.487629785665,10.1995700056163,28.6042691568043,31.8390444549358,29.1217476613268,13.0613310722529,6.64678258054425,6.75443611967459,6.00677276667578,7.60554466794075,5.13305909657271,0,0,5.41227602528035,9.62767488805375,6.0662933401774,18.2694207550496,15.5362730188303,17.0708459924548,6.59244241711316,7.30717147949139,7.84092690670599,11.0027527603414,13.4051126134703,13.1949920896159,17.7980376768749,11.7125479105128,2.65383165584962,5.3383060482645,7.06692859073259,8.24287930329878,1.86391761218122,3.51336956413857,3.77004072264219,21.4583926375217,10.6635460810269,7.19883277192089,10.2926883929182,7.63932260964596,4.57500602818627,3.5183218591602,6.60532416730651,7.41574826257959,9.55825004973976,5.84068547043927,11.1004906596845,8.70848794270651,15.9215337813215,10.1012090825508,3.25301107406759,4.36813998423599,4.50155324513373,5.12396380641431,5.03470093719826,5.38077625196369,3.93547243150861,6.46758426847539,2.15567992932842,3.40390944302075,4.39877810409872,5.69908904311695,5.83899223373756,9.05455632957633,5.14455341019859,8.55847347319521,2.80885274925294,6.17634977075316,10.7982129770325,4.97101854085205,4.69052119962192,6.84235833551856,7.10234206755631,4.9191057936851,6.47921874126989,5.58081467400979,6.17028823219124,4.67061369468678,4.77223564749093,9.35754545250843,6.97191762094359,9.21059920779594,10.5384055339704,7.78397228810156,7.78072809687271,4.32199371992995,36.3460661282178,11.9002754998595,6.61193576659225,4.87697010906921,8.63411990858025,10.8909103296605,19.1245117706588,26.0609107774206,23.2519240156811,32.6103930353542,22.6201687920243,22.2831248686089,21.4460495831032,25.1669434423182,30.9077411320813,30.2694735346638,3.41402221715547,5.9409226557059,7.88954149711563,4.68398054044223,8.72786192254316,6.0316805105674,15.6826612068158,19.3369293853279,19.9388384358546,17.5223972768957,33.795599487935,6.17326891149548,7.27268281918851,8.7696223830093,7.1001042485976,6.75296047306767,5.60176873919124,5.75392274901621,7.45822043165163,9.88421087477093,17.2521847832825,23.4448797031157,26.5232022147376,31.0672019874947,35.5206878773386,43.419916922703,8.49864674766381,3.7898282354097,7.00749398700711,6.28056817368196,6.33663670378956,11.0554129911598,7.85544014923845,5.65887578787617,7.09358148477859,9.30151696524855,9.40783135079174,6.71839590334526,9.84304396635605,10.9933284521949,28.6503439484617,20.668415985111,8.85175691434265,9.10591262805617,9.9541365792431,9.84578167374507,6.88526770582037,6.05930225290495,5.67914794949262,3.51394869866975,4.95473814785438,6.4521575447189,5.12436950389506,3.11384183867716,6.07216052512342,5.26060544240361,5.13874111330481,5.46246237917072,15.4714692877013,14.6013795007149,13.5196176263468,16.6619824202261,3.98235415019888,10.4395673546642,7.55808892411878,7.73280826999182,6.496641643377,7.07100840271033,8.26970538138308,11.2695456138027,6.41695281092498,5.37262488490887,0,7.21948802737308,21.4476951624886,5.94201610303324,6.59729287292048,6.85878512101095,7.09360934569094,8.74007206250146,8.06290200950393,10.9607381681256,18.3043932289694,24.3606881493393,2.8668691747145,6.43056386471772,6.13564821444441,6.6947346670253,5.252383136138,4.43180429311665,24.1929094402776,9.27126510052548,6.1513517087227,9.70018279427146,7.59297562215818,4.70921142511728,6.28793447516716,8.92234875505438,13.2583175395207,13.5752908753948,13.1289975114203,6.68269432610579,5.852215881251,7.9294592179471,7.66837919834789,8.57262013659322,10.0446779323242,8.36158947585888,12.9765925488777,6.02038666563268,11.7949625695532,13.0481255748254,6.20062232552609,12.7089064137382,9.43113395605456,15.7505462558679,13.8201011121172,20.7816034353657,18.1903719900919,18.6192270326849,17.9309478967966,11.1128695579963,13.2493802878618,6.32022241256356,6.08175645870493,7.70332178736204,8.18501184760109,7.34009452236674,5.36439657909415,9.2550496130376,8.86137163047463,9.38987984517773,9.06860999194498,8.97353047717881,8.57629350509821,9.71739600567328,14.2589820661514,4.98806843953465,8.21348027484039,2.9605572681127,6.71538465456314,12.170944424028,13.1377732815827,13.1869169472431,6.00231461421384,3.51100472824754,3.95326289831947,4.60325236507177,4.58316410751517,5.32744865265431,6.16574267793578,7.55393897389701,3.37511250115903,5.85417564191487,8.15656336171568,6.73088405277366,0.62272408550506,3.19219898720825,4.09760653809922,5.10524105843418,1.88651846365184,1.47074806760011,3.77819437262746,4.73880631649457,2.56735367673452,4.80124702351215,4.56262739802432,3.58390048633545,5.71213195566283,4.9939618875798,4.7671439233159,3.81034953026459,5.56244764535306,3.8581844092741,3.29668720642645,4.26876868389752,5.14303878578123,5.50174999093946,4.76872379894642,3.92435324907287,4.51725025993587,3.89227196301712,4.93905526756486,3.6829759601298,4.6173398707593,3.92799590160417,5.33857581558784,3.84167481264697,2.86461730218783,3.87342102964915,4.82266527452853,5.24602213669686,6.08222181958062,6.23126056740065,4.97349663378993,8.16188250742207,4.63735671240843
|short_description=p1@Siae
}}

Revision as of 17:45, 14 September 2013

Short description:p1@Siae
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Siae_5end
Coexpression cluster:MCL_coexpression_mm9:265
Association with transcript: 0bp_to_ENSMUST00000002007, NM_011734, uc009ove.1, uc009ovf.1_5end
EntrezGene:Siae
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Siae

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I320.57
CD326+ enterocyte, pool2.CNhs13197.11849-124I419.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.53
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.63
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.08
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I29.70
Ileum epithelium, pool1.CNhs13199.10252-104B943.33
Ileum epithelium, pool2.CNhs13232.10253-104C134.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.32
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.70
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F95.29
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.86
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C828.60
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.12
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.27
accessory axillary lymph node, adult.CNhs10475.1063-29H915.54
adrenal gland, adult.CNhs10508.49-24D717.07
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F511.00
adrenal gland, neonate N00.CNhs11191.1311-23C113.41
adrenal gland, neonate N25.CNhs11223.1377-27I313.19
amnion, adult pregnant day17.5.CNhs10488.583-22A817.80
aorta, adult.CNhs10498.46-23H111.71
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H721.46
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.66
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.29
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.71
epididymis, adult.CNhs10490.58-23B215.92
eyeball, adult.CNhs10484.31-12G410.10
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C65.03
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I68.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.80
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C66.48
heart, embryo E17.CNhs11025.479-18E55.58
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I24.77
heart, neonate N10.CNhs11118.749-24G19.36
heart, neonate N16.CNhs11209.782-15G16.97
heart, neonate N20.CNhs11127.821-26I69.21
heart, neonate N25.CNhs11196.1351-25D310.54
heart, neonate N30.CNhs11202.1390-42D27.78
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I336.35
intestine, adult.CNhs10496.178-9A311.90
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D88.63
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D319.12
intestine, embryo E18.CNhs10526.1289-20F726.06
intestine, neonate N00.CNhs11126.644-26D123.25
intestine, neonate N01.CNhs11192.1322-23E932.61
intestine, neonate N06.CNhs11102.688-20B822.62
intestine, neonate N07.CNhs11095.720-20F222.28
intestine, neonate N10.CNhs11098.755-23A521.45
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E330.91
intestine, neonate N30.CNhs11131.1384-42G130.27
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F85.94
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C78.73
kidney, neonate N00.CNhs11214.646-21G76.03
kidney, neonate N10.CNhs11206.758-6D515.68
kidney, neonate N20.CNhs11113.832-19I119.34
kidney, neonate N25.CNhs11122.1353-25F319.94
kidney, neonate N30.CNhs11203.1385-42H117.52
liver, adult pregnant day01.CNhs10466.508-5B233.80
liver, embryo E12.CNhs10601.355-15F86.17
liver, embryo E13.CNhs10524.378-3H67.27
liver, embryo E14.CNhs10594.409-16E18.77
liver, embryo E15.CNhs10520.433-16D77.10
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F47.46
liver, neonate N03.CNhs11123.1345-25G29.88
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H223.44
liver, neonate N10.CNhs11115.751-24B926.52
liver, neonate N20.CNhs11220.823-25A331.07
liver, neonate N25.CNhs11198.1368-26H135.52
liver, neonate N30.CNhs11106.1382-42D143.42
lung, adult.CNhs10474.28-22B18.50
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F87.01
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B66.34
lung, embryo E17.CNhs10605.480-44A611.06
lung, embryo E18.CNhs10583.1287-20I67.86
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E57.09
lung, neonate N07.CNhs11111.715-19A39.30
lung, neonate N10.CNhs11219.750-23E69.41
lung, neonate N20.CNhs11109.822-18A46.72
lung, neonate N25.CNhs11119.1359-25C79.84
lung, neonate N30.CNhs11133.1394-42H210.99
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A128.65
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A120.67
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C29.95
medulla oblongata, neonate N30.CNhs11200.1396-42A39.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I715.47
ovary, embryo E18.CNhs11040.505-44H714.60
ovary, neonate N00.CNhs11217.1299-22I413.52
oviduct, adult pregnant day01.CNhs10500.988-6G616.66
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E57.73
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D711.27
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G821.45
pituitary gland, embryo E12.CNhs11018.346-16E65.94
pituitary gland, embryo E13.CNhs11009.370-44C76.60
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F68.74
pituitary gland, embryo E17.CNhs11039.1265-44F58.06
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I718.30
placenta, adult pregnant day17.CNhs10464.577-18G324.36
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G46.14
skin, neonate N03.CNhs11215.662-22H36.69
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I124.19
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G26.15
spleen, embryo E16.CNhs11035.461-43C19.70
spleen, embryo E18.CNhs11011.1271-21F27.59
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H16.29
spleen, neonate N25.CNhs11099.1354-25G38.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.13
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D47.67
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B88.36
stomach, neonate N07.CNhs11210.718-18A912.98
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I111.79
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F512.71
testis, embryo E15.CNhs11034.443-27C59.43
testis, embryo E16.CNhs11033.470-26G515.75
testis, embryo E17.CNhs11029.486-18I513.82
testis, embryo E18.CNhs11027.503-18G520.78
testis, neonate N00.CNhs11189.1300-22B718.19
testis, neonate N07.CNhs11222.726-26I418.62
testis, neonate N10.CNhs11204.763-44D917.93
testis, neonate N20.CNhs11110.839-18H311.11
testis, neonate N30.CNhs11130.1391-42E213.25
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I27.70
thymus, embryo E16.CNhs11002.456-26C58.19
thymus, embryo E17.CNhs10581.478-18C17.34
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F89.26
thymus, neonate N03.CNhs11137.2104-43C78.86
thymus, neonate N06.CNhs11197.681-26C49.39
thymus, neonate N07.CNhs11211.713-19D39.07
thymus, neonate N10.CNhs11194.748-24E48.97
thymus, neonate N20.CNhs11186.820-7A28.58
thymus, neonate N25.CNhs11125.1362-25G79.72
thymus, neonate N30.CNhs11132.1393-42G214.26
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.72
urinary bladder, adult.CNhs10481.879-12E412.17
uterus, adult pregnant day19.CNhs10497.590-15F513.14
uterus, adult.CNhs10509.92-27E513.19
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D18.16
whole body, neonate N10.CNhs10518.761-6B44.64





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure6.36e-12118
endoderm6.36e-12118
presumptive endoderm6.36e-12118
digestive system4.81e-11116
digestive tract4.81e-11116
primitive gut4.81e-11116
subdivision of digestive tract2.04e-10114
intestine2.88e-1031
gastrointestinal system3.07e-0947
reproductive organ5.12e-0724







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