FFCP PHASE1:Mm9::chr9:109906142..109906146,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=833|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:109906142..109906146,+|id=chr9:109906142..109906146,+|ontology_enrichment_celltype=CL:0000117!8.55e-19!23;CL:0000337!8.55e-19!23;CL:0000540!5.61e-17!33;CL:0000047!5.61e-17!33;CL:0000031!5.61e-17!33;CL:0000404!5.61e-17!33;CL:0000393!3.25e-13!39;CL:0000211!3.25e-13!39;CL:0002319!2.59e-11!43;CL:0000221!6.79e-11!44;CL:0000133!6.79e-11!44;CL:0000055!9.27e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-16,23;CL:0000337,1.51e-16,23;CL:0002610,9.82e-14,3;CL:0002614,6.19e-13,3;CL:0000540,4.47e-11,33;CL:0000047,4.47e-11,33;CL:0000031,4.47e-11,33;CL:0000404,4.47e-11,33;CL:0000393,3.88e-09,39;CL:0000211,3.88e-09,39;CL:0002319,3.81e-08,43;CL:0000221,6.32e-08,44;CL:0000133,6.32e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.17e-32!73;UBERON:0005743!1.17e-32!73;UBERON:0000073!2.22e-31!75;UBERON:0001016!2.22e-31!75;UBERON:0001049!1.09e-27!52;UBERON:0005068!1.09e-27!52;UBERON:0006241!1.09e-27!52;UBERON:0007135!1.09e-27!52;UBERON:0000955!1.17e-25!50;UBERON:0006238!1.17e-25!50;UBERON:0002020!2.62e-25!34;UBERON:0002616!1.51e-24!49;UBERON:0004121!3.37e-23!102;UBERON:0000924!3.37e-23!102;UBERON:0006601!3.37e-23!102;UBERON:0000033!7.21e-23!63;UBERON:0002346!1.70e-21!71;UBERON:0003075!1.70e-21!71;UBERON:0007284!1.70e-21!71;UBERON:0002791!1.66e-19!29;UBERON:0003528!1.66e-19!29;UBERON:0001893!1.66e-19!29;UBERON:0003080!6.16e-19!40;UBERON:0002780!4.72e-18!39;UBERON:0001890!4.72e-18!39;UBERON:0006240!4.72e-18!39;UBERON:0003056!2.54e-17!49;UBERON:0000956!3.17e-15!21;UBERON:0001869!3.17e-15!21;UBERON:0000203!3.17e-15!21;UBERON:0002021!1.10e-14!10;UBERON:0000411!1.10e-14!10;UBERON:0001950!1.10e-14!10;UBERON:0007811!2.48e-14!86;UBERON:0002619!1.24e-13!17;UBERON:0000153!5.89e-13!94;UBERON:0000025!1.44e-09!114;UBERON:0003076!2.35e-09!12;UBERON:0003057!2.35e-09!12;UBERON:0004111!8.67e-09!122;UBERON:0002240!1.82e-08!6;UBERON:0005174!1.82e-08!6;UBERON:0001137!1.82e-08!6;UBERON:0001948!2.77e-07!5;UBERON:0002315!2.77e-07!5;UBERON:0002298!2.79e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.19e-42,10;UBERON:0000411,1.19e-42,10;UBERON:0001950,1.19e-42,10;UBERON:0002020,9.58e-30,34;UBERON:0000073,5.92e-26,54;UBERON:0002619,1.76e-24,17;UBERON:0003528,3.50e-23,29;UBERON:0002791,3.50e-23,29;UBERON:0001893,3.50e-23,29;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0001049,4.43e-21,52;UBERON:0005068,4.43e-21,52;UBERON:0006241,4.43e-21,52;UBERON:0007135,4.43e-21,52;UBERON:0000956,1.59e-19,21;UBERON:0001869,1.59e-19,21;UBERON:0000203,1.59e-19,21;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002780,1.11e-16,39;UBERON:0001890,1.11e-16,39;UBERON:0006240,1.11e-16,39;UBERON:0002346,1.31e-16,64;UBERON:0003075,1.31e-16,64;UBERON:0007284,1.31e-16,64;UBERON:0003080,3.28e-16,40;UBERON:0010371,3.24e-14,73;UBERON:0002616,8.27e-14,46;UBERON:0004684,9.82e-14,3;UBERON:0002275,9.82e-14,3;UBERON:0000955,1.81e-13,47;UBERON:0006238,1.81e-13,47;UBERON:0002038,6.19e-13,3;UBERON:0009663,6.19e-13,3;UBERON:0009661,6.19e-13,3;UBERON:0000125,6.19e-13,3;UBERON:0002308,6.19e-13,3;UBERON:0003056,7.91e-13,49;UBERON:0002240,4.32e-11,6;UBERON:0005174,4.32e-11,6;UBERON:0001137,4.32e-11,6;UBERON:0010314,1.09e-10,92;UBERON:0002950,7.81e-10,4;UBERON:0001891,7.81e-10,4;UBERON:0009616,7.81e-10,4;UBERON:0010286,7.81e-10,4;UBERON:0000025,4.58e-08,114;UBERON:0001948,6.47e-08,5;UBERON:0002315,6.47e-08,5;UBERON:0004111,2.41e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0.571301968807607,1.76694832761291,0.122490799214954,0.0958454710182364,0,2.20231761998777,2.42605942361857,3.22573719838111,0.395658863190582,0.640413505216868,0,3.62937898701795,1.12552522006336,1.06958773443767,1.47314292736834,1.13897344639282,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0.41889341362691,0.255457055208591,0,0,0,0.299581278809645,0,0.125654352112864,0.695297280769106,0.511430914660661,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,4.60325236507177,1.71868654031819,2.749650917499,2.05524755931193,1.5107877947794,2.02506750069542,5.85417564191487,6.79713613476307,5.1776031175182,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr9:109906142..109906146,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=833 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:109906142..109906146,+ | |||
|id=chr9:109906142..109906146,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.55e-19!23;CL:0000337!8.55e-19!23;CL:0000540!5.61e-17!33;CL:0000047!5.61e-17!33;CL:0000031!5.61e-17!33;CL:0000404!5.61e-17!33;CL:0000393!3.25e-13!39;CL:0000211!3.25e-13!39;CL:0002319!2.59e-11!43;CL:0000221!6.79e-11!44;CL:0000133!6.79e-11!44;CL:0000055!9.27e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-16,23;CL:0000337,1.51e-16,23;CL:0002610,9.82e-14,3;CL:0002614,6.19e-13,3;CL:0000540,4.47e-11,33;CL:0000047,4.47e-11,33;CL:0000031,4.47e-11,33;CL:0000404,4.47e-11,33;CL:0000393,3.88e-09,39;CL:0000211,3.88e-09,39;CL:0002319,3.81e-08,43;CL:0000221,6.32e-08,44;CL:0000133,6.32e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.17e-32!73;UBERON:0005743!1.17e-32!73;UBERON:0000073!2.22e-31!75;UBERON:0001016!2.22e-31!75;UBERON:0001049!1.09e-27!52;UBERON:0005068!1.09e-27!52;UBERON:0006241!1.09e-27!52;UBERON:0007135!1.09e-27!52;UBERON:0000955!1.17e-25!50;UBERON:0006238!1.17e-25!50;UBERON:0002020!2.62e-25!34;UBERON:0002616!1.51e-24!49;UBERON:0004121!3.37e-23!102;UBERON:0000924!3.37e-23!102;UBERON:0006601!3.37e-23!102;UBERON:0000033!7.21e-23!63;UBERON:0002346!1.70e-21!71;UBERON:0003075!1.70e-21!71;UBERON:0007284!1.70e-21!71;UBERON:0002791!1.66e-19!29;UBERON:0003528!1.66e-19!29;UBERON:0001893!1.66e-19!29;UBERON:0003080!6.16e-19!40;UBERON:0002780!4.72e-18!39;UBERON:0001890!4.72e-18!39;UBERON:0006240!4.72e-18!39;UBERON:0003056!2.54e-17!49;UBERON:0000956!3.17e-15!21;UBERON:0001869!3.17e-15!21;UBERON:0000203!3.17e-15!21;UBERON:0002021!1.10e-14!10;UBERON:0000411!1.10e-14!10;UBERON:0001950!1.10e-14!10;UBERON:0007811!2.48e-14!86;UBERON:0002619!1.24e-13!17;UBERON:0000153!5.89e-13!94;UBERON:0000025!1.44e-09!114;UBERON:0003076!2.35e-09!12;UBERON:0003057!2.35e-09!12;UBERON:0004111!8.67e-09!122;UBERON:0002240!1.82e-08!6;UBERON:0005174!1.82e-08!6;UBERON:0001137!1.82e-08!6;UBERON:0001948!2.77e-07!5;UBERON:0002315!2.77e-07!5;UBERON:0002298!2.79e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.19e-42,10;UBERON:0000411,1.19e-42,10;UBERON:0001950,1.19e-42,10;UBERON:0002020,9.58e-30,34;UBERON:0000073,5.92e-26,54;UBERON:0002619,1.76e-24,17;UBERON:0003528,3.50e-23,29;UBERON:0002791,3.50e-23,29;UBERON:0001893,3.50e-23,29;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0001049,4.43e-21,52;UBERON:0005068,4.43e-21,52;UBERON:0006241,4.43e-21,52;UBERON:0007135,4.43e-21,52;UBERON:0000956,1.59e-19,21;UBERON:0001869,1.59e-19,21;UBERON:0000203,1.59e-19,21;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002780,1.11e-16,39;UBERON:0001890,1.11e-16,39;UBERON:0006240,1.11e-16,39;UBERON:0002346,1.31e-16,64;UBERON:0003075,1.31e-16,64;UBERON:0007284,1.31e-16,64;UBERON:0003080,3.28e-16,40;UBERON:0010371,3.24e-14,73;UBERON:0002616,8.27e-14,46;UBERON:0004684,9.82e-14,3;UBERON:0002275,9.82e-14,3;UBERON:0000955,1.81e-13,47;UBERON:0006238,1.81e-13,47;UBERON:0002038,6.19e-13,3;UBERON:0009663,6.19e-13,3;UBERON:0009661,6.19e-13,3;UBERON:0000125,6.19e-13,3;UBERON:0002308,6.19e-13,3;UBERON:0003056,7.91e-13,49;UBERON:0002240,4.32e-11,6;UBERON:0005174,4.32e-11,6;UBERON:0001137,4.32e-11,6;UBERON:0010314,1.09e-10,92;UBERON:0002950,7.81e-10,4;UBERON:0001891,7.81e-10,4;UBERON:0009616,7.81e-10,4;UBERON:0010286,7.81e-10,4;UBERON:0000025,4.58e-08,114;UBERON:0001948,6.47e-08,5;UBERON:0002315,6.47e-08,5;UBERON:0004111,2.41e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0.571301968807607,1.76694832761291,0.122490799214954,0.0958454710182364,0,2.20231761998777,2.42605942361857,3.22573719838111,0.395658863190582,0.640413505216868,0,3.62937898701795,1.12552522006336,1.06958773443767,1.47314292736834,1.13897344639282,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0.41889341362691,0.255457055208591,0,0,0,0.299581278809645,0,0.125654352112864,0.695297280769106,0.511430914660661,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,4.60325236507177,1.71868654031819,2.749650917499,2.05524755931193,1.5107877947794,2.02506750069542,5.85417564191487,6.79713613476307,5.1776031175182,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr9:109906142..109906146,+ | |||
}} |
Revision as of 16:54, 14 September 2013
Short description: | p@chr9:109906142..109906146, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:109906142..109906146, + |
Coexpression cluster: | MCL_coexpression_mm9:833 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.51e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.51e-16 | 23 |
raphe nuclei neuron | 9.82e-14 | 3 |
neuron of the substantia nigra | 6.19e-13 | 3 |
neuron | 4.47e-11 | 33 |
neuronal stem cell | 4.47e-11 | 33 |
neuroblast | 4.47e-11 | 33 |
electrically signaling cell | 4.47e-11 | 33 |
electrically responsive cell | 3.88e-09 | 39 |
electrically active cell | 3.88e-09 | 39 |
neural cell | 3.81e-08 | 43 |
ectodermal cell | 6.32e-08 | 44 |
neurectodermal cell | 6.32e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.