FFCP PHASE1:Mm9::chr8:68968040..68968044,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=921|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:68968040..68968044,+|id=chr8:68968040..68968044,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,5.74e-16,6;CL:0000556,5.74e-16,6;CL:0000839,4.43e-12,13;CL:0000050,2.07e-10,9;CL:0000763,1.46e-09,16;CL:0002027,6.80e-08,3;CL:0002006,6.80e-08,3;CL:0002024,6.80e-08,3;CL:0000049,7.71e-08,19;CL:0002031,3.98e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,8.29e-09,3;DOID:4045,8.29e-09,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.46e-09,16;UBERON:0002204,4.74e-08,32;UBERON:0002106,1.31e-07,6;UBERON:0004457,1.31e-07,6;UBERON:0000042,1.31e-07,6;UBERON:0004854,1.31e-07,6;UBERON:0009034,1.31e-07,6;UBERON:0002095,1.31e-07,6;UBERON:0004782,1.31e-07,6;UBERON:0003281,1.31e-07,6;UBERON:0009664,1.31e-07,6;UBERON:0002296,1.31e-07,6;UBERON:0005602,1.31e-07,6;UBERON:0001179,1.31e-07,6;UBERON:0006293,1.31e-07,6;UBERON:0002193,8.23e-07,48;UBERON:0002405,8.23e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,1.61980213911861,1.39912375625629,8.3597473819933,13.8485577941796,10.6097412949508,0.765389611359628,0.0992909512008853,0,0.639969691173627,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.906676722619,1.57057123192139,7.05877785637217,6.14740936462601,2.42755176515577,0,0,0,0,0,0,0,0,0,2.01339127269284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,3.30347642998166,0,0.153606533256243,0.131886287730194,0,0,0,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.07150306917737,0.29688427812965,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0.299581278809645,0,0.125654352112864,0.521472960576829,0.767146371990992,0.41557608911912,0.324482526135515,0.101839363850316,0.373220911830279,0.252722758433675,0.841767423545896,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.0937017245597288,2.32833033665114,0,0.189106080167819,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0.32833492815819,0,0.292399974850665,0,0.268412837520744,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.126473074248515,0,0,0.123397163921801,1.1858105083486,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,1.29708181420028,0.549122826376163,4.31304619582064,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0,1.10851914099963,0,0,0.169745085775188,0,0.335012514883631,0,0.585400943573396,1.10344600874334,1.10732344824387,0.159454768657487,2.62181303545181,2.07221978239075,0.433947175744535,1.50791283939272,3.26343410291226,0.983528546038072,0,0,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.65954501176592,0.322928853391811,0.0603129249281559,0.238744688006273,0,0.582961673259701,0,3.2465467351592,0.206386867963223,0.740778109478847,3.39063222608444,3.69074414846768,3.20289442489132,0,0,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0,0,0,0.316011120628178,0,0,0.25984164595559,0,0,0,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0.384847366561318,0.116876902181569,0,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0,0,1.6942555278512,0.460325236507177,1.71868654031819,1.03111909406213,1.37016503954128,0.755393897389701,0,0.900642406448441,1.81256963593682,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0.685738504770831,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0|short_description=p@chr8:68968040..68968044,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=921 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:68968040..68968044,+ | |||
|id=chr8:68968040..68968044,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,5.74e-16,6;CL:0000556,5.74e-16,6;CL:0000839,4.43e-12,13;CL:0000050,2.07e-10,9;CL:0000763,1.46e-09,16;CL:0002027,6.80e-08,3;CL:0002006,6.80e-08,3;CL:0002024,6.80e-08,3;CL:0000049,7.71e-08,19;CL:0002031,3.98e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.29e-09,3;DOID:4045,8.29e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.46e-09,16;UBERON:0002204,4.74e-08,32;UBERON:0002106,1.31e-07,6;UBERON:0004457,1.31e-07,6;UBERON:0000042,1.31e-07,6;UBERON:0004854,1.31e-07,6;UBERON:0009034,1.31e-07,6;UBERON:0002095,1.31e-07,6;UBERON:0004782,1.31e-07,6;UBERON:0003281,1.31e-07,6;UBERON:0009664,1.31e-07,6;UBERON:0002296,1.31e-07,6;UBERON:0005602,1.31e-07,6;UBERON:0001179,1.31e-07,6;UBERON:0006293,1.31e-07,6;UBERON:0002193,8.23e-07,48;UBERON:0002405,8.23e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,1.61980213911861,1.39912375625629,8.3597473819933,13.8485577941796,10.6097412949508,0.765389611359628,0.0992909512008853,0,0.639969691173627,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.906676722619,1.57057123192139,7.05877785637217,6.14740936462601,2.42755176515577,0,0,0,0,0,0,0,0,0,2.01339127269284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,3.30347642998166,0,0.153606533256243,0.131886287730194,0,0,0,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.07150306917737,0.29688427812965,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0.299581278809645,0,0.125654352112864,0.521472960576829,0.767146371990992,0.41557608911912,0.324482526135515,0.101839363850316,0.373220911830279,0.252722758433675,0.841767423545896,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.0937017245597288,2.32833033665114,0,0.189106080167819,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0.32833492815819,0,0.292399974850665,0,0.268412837520744,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.126473074248515,0,0,0.123397163921801,1.1858105083486,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,1.29708181420028,0.549122826376163,4.31304619582064,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0,1.10851914099963,0,0,0.169745085775188,0,0.335012514883631,0,0.585400943573396,1.10344600874334,1.10732344824387,0.159454768657487,2.62181303545181,2.07221978239075,0.433947175744535,1.50791283939272,3.26343410291226,0.983528546038072,0,0,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.65954501176592,0.322928853391811,0.0603129249281559,0.238744688006273,0,0.582961673259701,0,3.2465467351592,0.206386867963223,0.740778109478847,3.39063222608444,3.69074414846768,3.20289442489132,0,0,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0,0,0,0.316011120628178,0,0,0.25984164595559,0,0,0,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0.384847366561318,0.116876902181569,0,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0,0,1.6942555278512,0.460325236507177,1.71868654031819,1.03111909406213,1.37016503954128,0.755393897389701,0,0.900642406448441,1.81256963593682,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0.685738504770831,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0 | |||
|short_description=p@chr8:68968040..68968044,+ | |||
}} |
Revision as of 15:53, 14 September 2013
Short description: | p@chr8:68968040..68968044, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:68968040..68968044, + |
Coexpression cluster: | MCL_coexpression_mm9:921 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 5.74e-16 | 6 |
megakaryocyte | 5.74e-16 | 6 |
myeloid lineage restricted progenitor cell | 4.43e-12 | 13 |
megakaryocyte-erythroid progenitor cell | 2.07e-10 | 9 |
myeloid cell | 1.46e-09 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 6.80e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 6.80e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 6.80e-08 | 3 |
common myeloid progenitor | 7.71e-08 | 19 |
hematopoietic lineage restricted progenitor cell | 3.98e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.46e-09 | 16 |
musculoskeletal system | 4.74e-08 | 32 |
spleen | 1.31e-07 | 6 |
cavity lining | 1.31e-07 | 6 |
serous membrane | 1.31e-07 | 6 |
gastrointestinal system mesentery | 1.31e-07 | 6 |
stomach region | 1.31e-07 | 6 |
mesentery | 1.31e-07 | 6 |
gastrointestinal system serosa | 1.31e-07 | 6 |
mesentery of stomach | 1.31e-07 | 6 |
gut mesentery | 1.31e-07 | 6 |
dorsal mesentery | 1.31e-07 | 6 |
dorsal mesogastrium | 1.31e-07 | 6 |
peritoneal cavity | 1.31e-07 | 6 |
spleen primordium | 1.31e-07 | 6 |
hemolymphoid system | 8.23e-07 | 48 |
immune system | 8.23e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.29e-09 | 3 |
muscle cancer | 8.29e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.