FFCP PHASE1:Mm9::chr8:128822529..128822543,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=210027|HGNC=|MCL_coexpression_id=1|UniProt=Q1LZI2|association_with_transcript=50bp_to_NM_175434,uc009nyt.1_5end|description=CAGE_peak_2_at_Slc35f3_5end|id=chr8:128822529..128822543,+|ontology_enrichment_celltype=CL:0000117!1.94e-07!23;CL:0000337!1.94e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-08,23;CL:0000337,1.62e-08,23;CL:0002612,1.63e-07,3;CL:0002610,1.81e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.30e-26!73;UBERON:0005743!8.30e-26!73;UBERON:0001049!1.60e-25!52;UBERON:0005068!1.60e-25!52;UBERON:0006241!1.60e-25!52;UBERON:0007135!1.60e-25!52;UBERON:0000033!1.25e-24!63;UBERON:0000073!1.27e-24!75;UBERON:0001016!1.27e-24!75;UBERON:0000955!2.87e-23!50;UBERON:0006238!2.87e-23!50;UBERON:0002616!2.14e-22!49;UBERON:0002346!1.08e-20!71;UBERON:0003075!1.08e-20!71;UBERON:0007284!1.08e-20!71;UBERON:0004121!2.41e-20!102;UBERON:0000924!2.41e-20!102;UBERON:0006601!2.41e-20!102;UBERON:0003056!1.26e-17!49;UBERON:0002020!1.45e-17!34;UBERON:0003080!2.71e-16!40;UBERON:0002780!1.60e-15!39;UBERON:0001890!1.60e-15!39;UBERON:0006240!1.60e-15!39;UBERON:0007811!1.02e-13!86;UBERON:0000153!2.19e-13!94;UBERON:0002791!4.24e-13!29;UBERON:0003528!4.24e-13!29;UBERON:0001893!4.24e-13!29;UBERON:0002619!1.88e-12!17;UBERON:0002021!8.22e-12!10;UBERON:0000411!8.22e-12!10;UBERON:0001950!8.22e-12!10;UBERON:0000956!9.76e-11!21;UBERON:0001869!9.76e-11!21;UBERON:0000203!9.76e-11!21;UBERON:0003076!3.06e-10!12;UBERON:0003057!3.06e-10!12;UBERON:0002240!2.80e-07!6;UBERON:0005174!2.80e-07!6;UBERON:0001137!2.80e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.96e-40,54;UBERON:0001049,8.09e-37,52;UBERON:0005068,8.09e-37,52;UBERON:0006241,8.09e-37,52;UBERON:0007135,8.09e-37,52;UBERON:0001017,2.15e-32,73;UBERON:0001016,2.42e-31,75;UBERON:0002346,1.14e-28,64;UBERON:0003075,1.14e-28,64;UBERON:0007284,1.14e-28,64;UBERON:0002020,1.88e-28,34;UBERON:0000955,3.14e-27,47;UBERON:0006238,3.14e-27,47;UBERON:0002616,1.35e-25,46;UBERON:0002021,5.79e-25,10;UBERON:0000411,5.79e-25,10;UBERON:0001950,5.79e-25,10;UBERON:0010371,2.61e-24,73;UBERON:0004121,2.96e-23,95;UBERON:0000924,2.96e-23,95;UBERON:0006601,2.96e-23,95;UBERON:0003080,2.14e-20,40;UBERON:0002619,1.24e-19,17;UBERON:0003528,3.15e-19,29;UBERON:0002791,3.15e-19,29;UBERON:0001893,3.15e-19,29;UBERON:0002780,6.14e-19,39;UBERON:0001890,6.14e-19,39;UBERON:0006240,6.14e-19,39;UBERON:0003076,1.52e-18,12;UBERON:0003057,1.52e-18,12;UBERON:0000956,2.54e-18,21;UBERON:0001869,2.54e-18,21;UBERON:0000203,2.54e-18,21;UBERON:0010314,6.61e-18,92;UBERON:0003056,9.12e-16,49;UBERON:0002240,1.29e-14,6;UBERON:0005174,1.29e-14,6;UBERON:0001137,1.29e-14,6;UBERON:0000025,3.73e-13,114;UBERON:0001948,3.49e-12,5;UBERON:0002315,3.49e-12,5;UBERON:0004111,7.51e-12,122;UBERON:0011216,1.09e-07,194;UBERON:0002257,1.63e-07,3;UBERON:0004684,1.81e-07,3;UBERON:0002275,1.81e-07,3|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,2.13872888981712,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,7.14127461009509,6.18431914664518,0.122490799214954,0,0,2.20231761998777,3.83062014255563,3.84016333140609,0.131886287730194,0.0914876436024097,0,4.18774498502071,0,3.66715794664344,5.30331453852602,4.12877874317399,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80615036115011,2.30391377494801,0,0,0,0,2.09706895166752,5.94750783664214,0.879580464790051,8.34356736922927,7.41574826257959,2.28566849015516,3.0825839982874,0.101839363850316,0,0,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.374806898238915,0.776110112217047,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04695876553905,0.514523061896422,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.569128834118316,0.590440591918409,0.31399745568275,1.72756029490521,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,5.61927064957272,3.5163505977661,0,0,0,0,0,0,0,0,0.404810701674894,0,0,2.57057053137446,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,7.78786268444141,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,6.7770221114048,4.60325236507177,5.72895513439397,4.29632955859219,8.90607275701835,9.06472676867641,6.07520250208625,7.65546045481175,5.89085131679466,8.80192529978094,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.492522411877817,0,0,0,0,0.467863216890817,0.644613162144895,0,0.220591419119515,0.463735671240843|short_description=p2@Slc35f3}} | ||
|EntrezGene=210027 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q1LZI2 | |||
|association_with_transcript=50bp_to_NM_175434,uc009nyt.1_5end | |||
|description=CAGE_peak_2_at_Slc35f3_5end | |||
|id=chr8:128822529..128822543,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.94e-07!23;CL:0000337!1.94e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-08,23;CL:0000337,1.62e-08,23;CL:0002612,1.63e-07,3;CL:0002610,1.81e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.30e-26!73;UBERON:0005743!8.30e-26!73;UBERON:0001049!1.60e-25!52;UBERON:0005068!1.60e-25!52;UBERON:0006241!1.60e-25!52;UBERON:0007135!1.60e-25!52;UBERON:0000033!1.25e-24!63;UBERON:0000073!1.27e-24!75;UBERON:0001016!1.27e-24!75;UBERON:0000955!2.87e-23!50;UBERON:0006238!2.87e-23!50;UBERON:0002616!2.14e-22!49;UBERON:0002346!1.08e-20!71;UBERON:0003075!1.08e-20!71;UBERON:0007284!1.08e-20!71;UBERON:0004121!2.41e-20!102;UBERON:0000924!2.41e-20!102;UBERON:0006601!2.41e-20!102;UBERON:0003056!1.26e-17!49;UBERON:0002020!1.45e-17!34;UBERON:0003080!2.71e-16!40;UBERON:0002780!1.60e-15!39;UBERON:0001890!1.60e-15!39;UBERON:0006240!1.60e-15!39;UBERON:0007811!1.02e-13!86;UBERON:0000153!2.19e-13!94;UBERON:0002791!4.24e-13!29;UBERON:0003528!4.24e-13!29;UBERON:0001893!4.24e-13!29;UBERON:0002619!1.88e-12!17;UBERON:0002021!8.22e-12!10;UBERON:0000411!8.22e-12!10;UBERON:0001950!8.22e-12!10;UBERON:0000956!9.76e-11!21;UBERON:0001869!9.76e-11!21;UBERON:0000203!9.76e-11!21;UBERON:0003076!3.06e-10!12;UBERON:0003057!3.06e-10!12;UBERON:0002240!2.80e-07!6;UBERON:0005174!2.80e-07!6;UBERON:0001137!2.80e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.96e-40,54;UBERON:0001049,8.09e-37,52;UBERON:0005068,8.09e-37,52;UBERON:0006241,8.09e-37,52;UBERON:0007135,8.09e-37,52;UBERON:0001017,2.15e-32,73;UBERON:0001016,2.42e-31,75;UBERON:0002346,1.14e-28,64;UBERON:0003075,1.14e-28,64;UBERON:0007284,1.14e-28,64;UBERON:0002020,1.88e-28,34;UBERON:0000955,3.14e-27,47;UBERON:0006238,3.14e-27,47;UBERON:0002616,1.35e-25,46;UBERON:0002021,5.79e-25,10;UBERON:0000411,5.79e-25,10;UBERON:0001950,5.79e-25,10;UBERON:0010371,2.61e-24,73;UBERON:0004121,2.96e-23,95;UBERON:0000924,2.96e-23,95;UBERON:0006601,2.96e-23,95;UBERON:0003080,2.14e-20,40;UBERON:0002619,1.24e-19,17;UBERON:0003528,3.15e-19,29;UBERON:0002791,3.15e-19,29;UBERON:0001893,3.15e-19,29;UBERON:0002780,6.14e-19,39;UBERON:0001890,6.14e-19,39;UBERON:0006240,6.14e-19,39;UBERON:0003076,1.52e-18,12;UBERON:0003057,1.52e-18,12;UBERON:0000956,2.54e-18,21;UBERON:0001869,2.54e-18,21;UBERON:0000203,2.54e-18,21;UBERON:0010314,6.61e-18,92;UBERON:0003056,9.12e-16,49;UBERON:0002240,1.29e-14,6;UBERON:0005174,1.29e-14,6;UBERON:0001137,1.29e-14,6;UBERON:0000025,3.73e-13,114;UBERON:0001948,3.49e-12,5;UBERON:0002315,3.49e-12,5;UBERON:0004111,7.51e-12,122;UBERON:0011216,1.09e-07,194;UBERON:0002257,1.63e-07,3;UBERON:0004684,1.81e-07,3;UBERON:0002275,1.81e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,2.13872888981712,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,7.14127461009509,6.18431914664518,0.122490799214954,0,0,2.20231761998777,3.83062014255563,3.84016333140609,0.131886287730194,0.0914876436024097,0,4.18774498502071,0,3.66715794664344,5.30331453852602,4.12877874317399,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80615036115011,2.30391377494801,0,0,0,0,2.09706895166752,5.94750783664214,0.879580464790051,8.34356736922927,7.41574826257959,2.28566849015516,3.0825839982874,0.101839363850316,0,0,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.374806898238915,0.776110112217047,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04695876553905,0.514523061896422,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.569128834118316,0.590440591918409,0.31399745568275,1.72756029490521,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,5.61927064957272,3.5163505977661,0,0,0,0,0,0,0,0,0.404810701674894,0,0,2.57057053137446,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,7.78786268444141,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,6.7770221114048,4.60325236507177,5.72895513439397,4.29632955859219,8.90607275701835,9.06472676867641,6.07520250208625,7.65546045481175,5.89085131679466,8.80192529978094,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.492522411877817,0,0,0,0,0.467863216890817,0.644613162144895,0,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Slc35f3 | |||
}} |
Revision as of 15:10, 14 September 2013
Short description: | p2@Slc35f3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc35f3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 50bp_to_NM_175434, uc009nyt.1_5end |
EntrezGene: | Slc35f3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.62e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-08 | 23 |
neuron of the ventral spinal cord | 1.63e-07 | 3 |
raphe nuclei neuron | 1.81e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.