FFCP PHASE1:Mm9::chr8:125930993..125931014,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=17199|HGNC=|MCL_coexpression_id=198|UniProt=Q01727|association_with_transcript=11bp_to_ENSMUST00000098324,NM_008559,uc009nvs.1_5end|description=CAGE_peak_1_at_Mc1r_5end|id=chr8:125930993..125931014,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000764,1.62e-13,3;CL:0000765,1.62e-13,3;CL:0000038,1.62e-13,3;CL:0000547,1.62e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,1.62e-13,3;DOID:0060083,1.62e-13,3;DOID:1240,1.62e-13,3;DOID:0050686,3.16e-07,6|ontology_enrichment_uberon=UBERON:0000014!1.53e-08!5;UBERON:0001003!1.53e-08!5;UBERON:0002097!1.53e-08!5;UBERON:0002199!1.53e-08!5;UBERON:0007029!1.53e-08!5;UBERON:0007376!1.53e-08!5;UBERON:0002416!1.53e-08!5;UBERON:0007383!1.53e-08!5;UBERON:0000970!4.71e-07!9;UBERON:0000019!4.71e-07!9;UBERON:0000047!4.71e-07!9;UBERON:0004088!4.71e-07!9;UBERON:0002104!4.71e-07!9;UBERON:0001456!4.71e-07!9;UBERON:0003072!4.71e-07!9;UBERON:0003071!4.71e-07!9;UBERON:0004128!4.71e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.43e-49,5;UBERON:0001003,2.43e-49,5;UBERON:0002097,2.43e-49,5;UBERON:0002199,2.43e-49,5;UBERON:0007029,2.43e-49,5;UBERON:0007376,2.43e-49,5;UBERON:0002416,2.43e-49,5;UBERON:0007383,2.43e-49,5;UBERON:0003102,2.00e-11,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,0,0.496454756004426,2.35079810225042,0,0,0,0,0,0,0,0,1.27006134691926,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0.540186389416048,0.60281927134286,0.340182495756639,0.640568601424249,0.374806898238915,3.10444044886819,0,0,0,0,0,0,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97863503529776,5.48979050766079,3.25689794612042,6.80422360817878,6.56563598980245,0,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.821687657318618,0.25984164595559,0.716106782669926,0.596044064343795,0.480781798079875,0.590758108698309,0.908698049533329,0.304827226619999,0.403304740547362,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0.715308569841963,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0,0.661774257358546,0|short_description=p1@Mc1r}} | ||
|EntrezGene=17199 | |||
|HGNC= | |||
|MCL_coexpression_id=198 | |||
|UniProt=Q01727 | |||
|association_with_transcript=11bp_to_ENSMUST00000098324,NM_008559,uc009nvs.1_5end | |||
|description=CAGE_peak_1_at_Mc1r_5end | |||
|id=chr8:125930993..125931014,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.62e-13,3;CL:0000765,1.62e-13,3;CL:0000038,1.62e-13,3;CL:0000547,1.62e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.62e-13,3;DOID:0060083,1.62e-13,3;DOID:1240,1.62e-13,3;DOID:0050686,3.16e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000014!1.53e-08!5;UBERON:0001003!1.53e-08!5;UBERON:0002097!1.53e-08!5;UBERON:0002199!1.53e-08!5;UBERON:0007029!1.53e-08!5;UBERON:0007376!1.53e-08!5;UBERON:0002416!1.53e-08!5;UBERON:0007383!1.53e-08!5;UBERON:0000970!4.71e-07!9;UBERON:0000019!4.71e-07!9;UBERON:0000047!4.71e-07!9;UBERON:0004088!4.71e-07!9;UBERON:0002104!4.71e-07!9;UBERON:0001456!4.71e-07!9;UBERON:0003072!4.71e-07!9;UBERON:0003071!4.71e-07!9;UBERON:0004128!4.71e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.43e-49,5;UBERON:0001003,2.43e-49,5;UBERON:0002097,2.43e-49,5;UBERON:0002199,2.43e-49,5;UBERON:0007029,2.43e-49,5;UBERON:0007376,2.43e-49,5;UBERON:0002416,2.43e-49,5;UBERON:0007383,2.43e-49,5;UBERON:0003102,2.00e-11,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,0,0.496454756004426,2.35079810225042,0,0,0,0,0,0,0,0,1.27006134691926,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0.540186389416048,0.60281927134286,0.340182495756639,0.640568601424249,0.374806898238915,3.10444044886819,0,0,0,0,0,0,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97863503529776,5.48979050766079,3.25689794612042,6.80422360817878,6.56563598980245,0,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.821687657318618,0.25984164595559,0.716106782669926,0.596044064343795,0.480781798079875,0.590758108698309,0.908698049533329,0.304827226619999,0.403304740547362,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0.715308569841963,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0,0.661774257358546,0 | |||
|short_description=p1@Mc1r | |||
}} |
Revision as of 15:04, 14 September 2013
Short description: | p1@Mc1r |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mc1r_5end |
Coexpression cluster: | MCL_coexpression_mm9:198 |
Association with transcript: | 11bp_to_ENSMUST00000098324, NM_008559, uc009nvs.1_5end |
EntrezGene: | Mc1r |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.62e-13 | 3 |
erythroblast | 1.62e-13 | 3 |
erythroid progenitor cell | 1.62e-13 | 3 |
proerythroblast | 1.62e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 2.43e-49 | 5 |
skin epidermis | 2.43e-49 | 5 |
skin of body | 2.43e-49 | 5 |
integument | 2.43e-49 | 5 |
surface | 2.43e-49 | 5 |
outer epithelium | 2.43e-49 | 5 |
integumental system | 2.43e-49 | 5 |
enveloping layer of ectoderm | 2.43e-49 | 5 |
surface structure | 2.00e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.62e-13 | 3 |
immune system cancer | 1.62e-13 | 3 |
leukemia | 1.62e-13 | 3 |
organ system cancer | 3.16e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.